BLASTX nr result

ID: Dioscorea21_contig00001751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001751
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   580   e-163
gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| pu...   578   e-163
gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| un...   578   e-163
ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [S...   577   e-162
ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] g...   577   e-162

>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
            chloroplastic [Vitis vinifera]
            gi|297743227|emb|CBI36094.3| unnamed protein product
            [Vitis vinifera]
          Length = 609

 Score =  580 bits (1494), Expect = e-163
 Identities = 297/339 (87%), Positives = 319/339 (94%)
 Frame = +1

Query: 1    SEKMSVEYENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNRL 180
            SEKM+VEYENCKLLLVDKKITNARDLINVLEDAI+GGYPILIIAEDIEQEALATLVVN+L
Sbjct: 271  SEKMAVEYENCKLLLVDKKITNARDLINVLEDAIKGGYPILIIAEDIEQEALATLVVNKL 330

Query: 181  RGALKIAALKAPGFGERKSQYLDDIAILTGATVVRDEVGITLDKADKDVLGLAAKVVLTK 360
            RGALKIAALKAPGFGERKSQYLDDIAILTG TV+R+EVG++LDKA+K+VLG AAKVVLTK
Sbjct: 331  RGALKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKAEKEVLGHAAKVVLTK 390

Query: 361  DATTIVGDGSTQEEVTKRVAQIQNLIEVADQEYEKEKLNERIAKLSGGVAVIQVGAQTET 540
            D TTIVGDGSTQE V KRVAQI+NL+E ADQ+YEKEKLNERIAKLSGGVAVIQVGAQTET
Sbjct: 391  DTTTIVGDGSTQEAVNKRVAQIRNLVEAADQDYEKEKLNERIAKLSGGVAVIQVGAQTET 450

Query: 541  ELKEKKLRVEDALNATKAAXXXXXXXXXXCALLRLASKVDAIKDTLENDEQKVGADIVKR 720
            ELKEKKLRVEDALNATKAA          C LLRLA+KVDAIKDTL++DEQKVGADIVKR
Sbjct: 451  ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLDSDEQKVGADIVKR 510

Query: 721  ALTYPLKLIAKNAGVNGSVVTEKILSNDNLKFGYNAATGKYEDLMAAGIIDPTKVVRCCL 900
            AL+YP+KLIAKNAGVNGSVV EK+LS+DN K+GYNAATGKYEDLMAAGIIDPTKVVRCCL
Sbjct: 511  ALSYPMKLIAKNAGVNGSVVIEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCL 570

Query: 901  EHAASVAKTFLTSDVVVVDIKEPEPVPAGNPMDNSGYGY 1017
            EHAASVA+TFLTSD VVVDIKEPEP+PAGNPMDNSGYGY
Sbjct: 571  EHAASVARTFLTSDAVVVDIKEPEPIPAGNPMDNSGYGY 609


>gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| putative TCP-1/cpn60
            chaperonin family protein [Zea mays]
          Length = 600

 Score =  578 bits (1491), Expect = e-163
 Identities = 297/339 (87%), Positives = 318/339 (93%)
 Frame = +1

Query: 1    SEKMSVEYENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNRL 180
            SEKM+ EYENCKLLLVDKKITNARDLINVLE+AIRG YPILIIAEDIEQEALATLVVN+L
Sbjct: 262  SEKMTAEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL 321

Query: 181  RGALKIAALKAPGFGERKSQYLDDIAILTGATVVRDEVGITLDKADKDVLGLAAKVVLTK 360
            RG+LKIAA+KAPGFGERK+QYLDDIAILTGATV+RDEVG++LDKADK VLG AAKVVLTK
Sbjct: 322  RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLTK 381

Query: 361  DATTIVGDGSTQEEVTKRVAQIQNLIEVADQEYEKEKLNERIAKLSGGVAVIQVGAQTET 540
            ++TTIVGDGSTQEEVTKRVAQI+NLIE A+QEYEKEKLNERIAKL+GGVAVIQVGAQTET
Sbjct: 382  ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET 441

Query: 541  ELKEKKLRVEDALNATKAAXXXXXXXXXXCALLRLASKVDAIKDTLENDEQKVGADIVKR 720
            ELKEKKLRVEDALNATKAA          C LLRLA+KVDAIKDTLENDEQKVGA+IV+R
Sbjct: 442  ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRR 501

Query: 721  ALTYPLKLIAKNAGVNGSVVTEKILSNDNLKFGYNAATGKYEDLMAAGIIDPTKVVRCCL 900
            AL+YPLKLIAKNAGVNGSVVTEK+LSNDN K+GYNAATG+YEDLMAAGIIDPTKVVRCCL
Sbjct: 502  ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQYEDLMAAGIIDPTKVVRCCL 561

Query: 901  EHAASVAKTFLTSDVVVVDIKEPEPVPAGNPMDNSGYGY 1017
            EHAASVAKTFLTSDVVVVDIKEPE  P  NPMDNSGYGY
Sbjct: 562  EHAASVAKTFLTSDVVVVDIKEPEAAPVANPMDNSGYGY 600


>gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| unknown [Zea mays]
            gi|413953490|gb|AFW86139.1| putative TCP-1/cpn60
            chaperonin family protein isoform 1 [Zea mays]
            gi|413953491|gb|AFW86140.1| putative TCP-1/cpn60
            chaperonin family protein isoform 2 [Zea mays]
            gi|413953492|gb|AFW86141.1| putative TCP-1/cpn60
            chaperonin family protein isoform 3 [Zea mays]
          Length = 579

 Score =  578 bits (1491), Expect = e-163
 Identities = 297/339 (87%), Positives = 318/339 (93%)
 Frame = +1

Query: 1    SEKMSVEYENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNRL 180
            SEKM+ EYENCKLLLVDKKITNARDLINVLE+AIRG YPILIIAEDIEQEALATLVVN+L
Sbjct: 241  SEKMTAEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL 300

Query: 181  RGALKIAALKAPGFGERKSQYLDDIAILTGATVVRDEVGITLDKADKDVLGLAAKVVLTK 360
            RG+LKIAA+KAPGFGERK+QYLDDIAILTGATV+RDEVG++LDKADK VLG AAKVVLTK
Sbjct: 301  RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLTK 360

Query: 361  DATTIVGDGSTQEEVTKRVAQIQNLIEVADQEYEKEKLNERIAKLSGGVAVIQVGAQTET 540
            ++TTIVGDGSTQEEVTKRVAQI+NLIE A+QEYEKEKLNERIAKL+GGVAVIQVGAQTET
Sbjct: 361  ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET 420

Query: 541  ELKEKKLRVEDALNATKAAXXXXXXXXXXCALLRLASKVDAIKDTLENDEQKVGADIVKR 720
            ELKEKKLRVEDALNATKAA          C LLRLA+KVDAIKDTLENDEQKVGA+IV+R
Sbjct: 421  ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRR 480

Query: 721  ALTYPLKLIAKNAGVNGSVVTEKILSNDNLKFGYNAATGKYEDLMAAGIIDPTKVVRCCL 900
            AL+YPLKLIAKNAGVNGSVVTEK+LSNDN K+GYNAATG+YEDLMAAGIIDPTKVVRCCL
Sbjct: 481  ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQYEDLMAAGIIDPTKVVRCCL 540

Query: 901  EHAASVAKTFLTSDVVVVDIKEPEPVPAGNPMDNSGYGY 1017
            EHAASVAKTFLTSDVVVVDIKEPE  P  NPMDNSGYGY
Sbjct: 541  EHAASVAKTFLTSDVVVVDIKEPEAAPVANPMDNSGYGY 579


>ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [Sorghum bicolor]
            gi|241915932|gb|EER89076.1| hypothetical protein
            SORBIDRAFT_10g001120 [Sorghum bicolor]
          Length = 579

 Score =  577 bits (1488), Expect = e-162
 Identities = 297/339 (87%), Positives = 318/339 (93%)
 Frame = +1

Query: 1    SEKMSVEYENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNRL 180
            SEKMS EYENCKLLLVDKKITNARDLINVLE+AIRG YPILIIAEDIEQEALATLVVN+L
Sbjct: 241  SEKMSAEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL 300

Query: 181  RGALKIAALKAPGFGERKSQYLDDIAILTGATVVRDEVGITLDKADKDVLGLAAKVVLTK 360
            RG+LKIAA+KAPGFGERK+QYLDDIAILTGATV+RDEVG++LDKADK VLG AAKVVLTK
Sbjct: 301  RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLTK 360

Query: 361  DATTIVGDGSTQEEVTKRVAQIQNLIEVADQEYEKEKLNERIAKLSGGVAVIQVGAQTET 540
            ++TTIVGDGSTQEEVTKRVAQI+NLIE A+QEYEKEKLNERIAKL+GGVAVIQVGAQTET
Sbjct: 361  ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET 420

Query: 541  ELKEKKLRVEDALNATKAAXXXXXXXXXXCALLRLASKVDAIKDTLENDEQKVGADIVKR 720
            ELKEKKLRVEDALNATKAA          C LLRLA+KVDAIKDTLENDEQKVGA+IV+R
Sbjct: 421  ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRR 480

Query: 721  ALTYPLKLIAKNAGVNGSVVTEKILSNDNLKFGYNAATGKYEDLMAAGIIDPTKVVRCCL 900
            AL+YPLKLIAKNAGVNGSVVTEK+LSNDN K+GYNAATG++EDLMAAGIIDPTKVVRCCL
Sbjct: 481  ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQHEDLMAAGIIDPTKVVRCCL 540

Query: 901  EHAASVAKTFLTSDVVVVDIKEPEPVPAGNPMDNSGYGY 1017
            EHAASVAKTFLTSDVVVVDIKEPE  P  NPMDNSGYGY
Sbjct: 541  EHAASVAKTFLTSDVVVVDIKEPEAAPLANPMDNSGYGY 579


>ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] gi|7248401|dbj|BAA92724.1|
            putative chaperonin 60 beta precursor [Oryza sativa
            Japonica Group] gi|113594641|dbj|BAF18515.1| Os06g0114000
            [Oryza sativa Japonica Group] gi|164375533|gb|ABY52934.1|
            RuBisCo subunit binding-protein beta subunit [Oryza
            sativa Japonica Group] gi|215715264|dbj|BAG95015.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 601

 Score =  577 bits (1486), Expect = e-162
 Identities = 296/339 (87%), Positives = 317/339 (93%)
 Frame = +1

Query: 1    SEKMSVEYENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAEDIEQEALATLVVNRL 180
            SEKMS EYENCKLLLVDKKITNARDLINVLE+AIRG YPILIIAEDIEQEALATLVVN+L
Sbjct: 263  SEKMSAEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL 322

Query: 181  RGALKIAALKAPGFGERKSQYLDDIAILTGATVVRDEVGITLDKADKDVLGLAAKVVLTK 360
            RG+LKIAA+KAPGFGERK+QYLDDIAILTGATV+RDEVG++LDKADK VLG AAKVVL K
Sbjct: 323  RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLNK 382

Query: 361  DATTIVGDGSTQEEVTKRVAQIQNLIEVADQEYEKEKLNERIAKLSGGVAVIQVGAQTET 540
            ++TTIVGDGSTQEEVTKRVAQI+NLIE A+QEYEKEKLNERIAKL+GGVAVIQVGAQTET
Sbjct: 383  ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET 442

Query: 541  ELKEKKLRVEDALNATKAAXXXXXXXXXXCALLRLASKVDAIKDTLENDEQKVGADIVKR 720
            ELKEKKLRVEDALNATKAA          C LLRLA++VDAIKD LENDEQKVGA+IV+R
Sbjct: 443  ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAARVDAIKDNLENDEQKVGAEIVRR 502

Query: 721  ALTYPLKLIAKNAGVNGSVVTEKILSNDNLKFGYNAATGKYEDLMAAGIIDPTKVVRCCL 900
            AL+YPLKLIAKNAGVNGSVVTEK+LSNDN KFGYNAATG+YEDLMAAGIIDPTKVVRCCL
Sbjct: 503  ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCL 562

Query: 901  EHAASVAKTFLTSDVVVVDIKEPEPVPAGNPMDNSGYGY 1017
            EHAASVAKTFLTSDVVVV+IKEPEP P  NPMDNSGYGY
Sbjct: 563  EHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMDNSGYGY 601


Top