BLASTX nr result

ID: Dioscorea21_contig00001744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001744
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5...   154   2e-35
ref|XP_004141961.1| PREDICTED: ABC transporter F family member 5...   147   2e-33
ref|XP_002866638.1| ATGCN5 [Arabidopsis lyrata subsp. lyrata] gi...   144   2e-32
emb|CBI21514.3| unnamed protein product [Vitis vinifera]              142   5e-32
ref|XP_002310031.1| ABC transporter family protein [Populus tric...   139   5e-31

>ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5 [Vitis vinifera]
          Length = 718

 Score =  154 bits (389), Expect = 2e-35
 Identities = 103/225 (45%), Positives = 124/225 (55%), Gaps = 9/225 (4%)
 Frame = +1

Query: 85  MDITAKLRGVDLRSSFLPGRALLPAGNP------RILHKLAPFSASPAQSRRFRASLVKK 246
           MD+  KL+ +DLRSSF  G ALL A         R   +  P SAS        +S+   
Sbjct: 1   MDLATKLQCIDLRSSFFTGSALLDARKTGLRPHFRPHTRSIPISASTHSITGSNSSIKTS 60

Query: 247 ASF-CXXXXXXXXXXXXXVETAVIET--QDDIXXXXXXXXXXDAAAKRQXXXXXXXXXXX 417
           A F               ++T+V ET  ++DI          +A  KR            
Sbjct: 61  ALFNSRTRSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKR-VNKQSNSGASS 119

Query: 418 XXXXIRLENISKSFKGVTVLRDVSWEXXXXXXXXXXXXXXAGKTTQLRIIAGLDEPDSGN 597
               +RLEN+SK +KGVTVL+DVSWE              AGKTTQLRII GL+EPDSGN
Sbjct: 120 ISSGVRLENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIITGLEEPDSGN 179

Query: 598 VVKARENMKIAFLSQEFEVCPSRTVKEEFLSAFAEEMDIAERLEK 732
           V+KA+ NMKIAFLSQEFEV  SRTVKEEF+SAF EEM+IA RLEK
Sbjct: 180 VIKAKMNMKIAFLSQEFEVSLSRTVKEEFMSAFKEEMEIAARLEK 224


>ref|XP_004141961.1| PREDICTED: ABC transporter F family member 5-like [Cucumis sativus]
           gi|449519128|ref|XP_004166587.1| PREDICTED: ABC
           transporter F family member 5-like [Cucumis sativus]
          Length = 714

 Score =  147 bits (372), Expect = 2e-33
 Identities = 97/221 (43%), Positives = 124/221 (56%), Gaps = 5/221 (2%)
 Frame = +1

Query: 85  MDITAKLRGVDLRSSFLPGRALLPAGNPRI---LHKLAPFSASPAQSRRFRASLVKKASF 255
           MD+T KL  + LRSSFL G  LL +         H L+  + S +    F++  ++ +S 
Sbjct: 1   MDLTIKLHHLHLRSSFLTGSPLLDSRKTLFGSSQHHLSNRTVSQSIGGNFKS--IRASSL 58

Query: 256 CXXXXXXXXXXXXXVETAVIET--QDDIXXXXXXXXXXDAAAKRQXXXXXXXXXXXXXXX 429
                         VE +V ET  ++DI          +   KR                
Sbjct: 59  PNPRRVNSRIEAVAVEASVAETSTKEDIESLLSSGSVGEFDGKR-VFKQSNAGDSRISSG 117

Query: 430 IRLENISKSFKGVTVLRDVSWEXXXXXXXXXXXXXXAGKTTQLRIIAGLDEPDSGNVVKA 609
           ++LEN+SKS+KG TVL++VSWE              AGKTTQ+RIIAGL+EPDSGNV+KA
Sbjct: 118 VKLENVSKSYKGATVLKNVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVMKA 177

Query: 610 RENMKIAFLSQEFEVCPSRTVKEEFLSAFAEEMDIAERLEK 732
           + NMKIAFLSQEFEV  SRTV+EEFLSAF EEM+IA RLEK
Sbjct: 178 KANMKIAFLSQEFEVSLSRTVREEFLSAFKEEMEIATRLEK 218


>ref|XP_002866638.1| ATGCN5 [Arabidopsis lyrata subsp. lyrata]
           gi|297312473|gb|EFH42897.1| ATGCN5 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 694

 Score =  144 bits (363), Expect = 2e-32
 Identities = 88/216 (40%), Positives = 115/216 (53%)
 Frame = +1

Query: 85  MDITAKLRGVDLRSSFLPGRALLPAGNPRILHKLAPFSASPAQSRRFRASLVKKASFCXX 264
           M ++  L  +DLRS+F  G    P+  P    K++  S         RA +         
Sbjct: 1   MGLSTNLHSLDLRSTFFTGLRPCPSPIPSNFIKISSISNPRRGISTIRAQV--------- 51

Query: 265 XXXXXXXXXXXVETAVIETQDDIXXXXXXXXXXDAAAKRQXXXXXXXXXXXXXXXIRLEN 444
                      +ET+V E QD+I            + +R+               ++LEN
Sbjct: 52  -------STISLETSVKERQDEIESLFSKPTSEQDSDRRRNGKNSKNGASGISSGVKLEN 104

Query: 445 ISKSFKGVTVLRDVSWEXXXXXXXXXXXXXXAGKTTQLRIIAGLDEPDSGNVVKARENMK 624
           I KS+KGVTVL+DV+WE              AGKTTQLRII G +EPDSGNV+KA+ NMK
Sbjct: 105 IRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMK 164

Query: 625 IAFLSQEFEVCPSRTVKEEFLSAFAEEMDIAERLEK 732
           IAFLSQEFEV  S+TV+EEF+SAF EEM+I E+LEK
Sbjct: 165 IAFLSQEFEVSMSKTVREEFMSAFKEEMEITEKLEK 200


>emb|CBI21514.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  142 bits (359), Expect = 5e-32
 Identities = 94/214 (43%), Positives = 119/214 (55%), Gaps = 2/214 (0%)
 Frame = +1

Query: 85  MDITAKLRGVDLRSSFLPGRALLPAGNPRILHKLAPFSASPAQSRRFRASLVKKASFCXX 264
           MD+  KL+ +DLRSSF  G ALL A   R     +    S   + R R+S+V   +    
Sbjct: 1   MDLATKLQCIDLRSSFFTGSALLDA---RKTGSNSSIKTSALFNSRTRSSMVSSKAVA-- 55

Query: 265 XXXXXXXXXXXVETAVIET--QDDIXXXXXXXXXXDAAAKRQXXXXXXXXXXXXXXXIRL 438
                      ++T+V ET  ++DI          +A  KR                +RL
Sbjct: 56  -----------MDTSVAETMSREDIESLFSNNSVDEAYQKR-VNKQSNSGASSISSGVRL 103

Query: 439 ENISKSFKGVTVLRDVSWEXXXXXXXXXXXXXXAGKTTQLRIIAGLDEPDSGNVVKAREN 618
           EN+SK +KGVTVL+DVSWE              AGKTTQLRII GL+EPDSGNV+KA+ N
Sbjct: 104 ENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIITGLEEPDSGNVIKAKMN 163

Query: 619 MKIAFLSQEFEVCPSRTVKEEFLSAFAEEMDIAE 720
           MKIAFLSQEFEV  SRTVKEEF+SA A+ +D+ E
Sbjct: 164 MKIAFLSQEFEVSLSRTVKEEFMSARAQAVDLDE 197


>ref|XP_002310031.1| ABC transporter family protein [Populus trichocarpa]
           gi|222852934|gb|EEE90481.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 635

 Score =  139 bits (351), Expect = 5e-31
 Identities = 72/101 (71%), Positives = 81/101 (80%)
 Frame = +1

Query: 430 IRLENISKSFKGVTVLRDVSWEXXXXXXXXXXXXXXAGKTTQLRIIAGLDEPDSGNVVKA 609
           I+LENISKS+KGVTVL+DV+WE              AGKTTQLRII G +EPDSGNV+KA
Sbjct: 41  IKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKA 100

Query: 610 RENMKIAFLSQEFEVCPSRTVKEEFLSAFAEEMDIAERLEK 732
           + NMKIAFLSQEFEV  SRTVKEEF+SAF EEM+IAERLEK
Sbjct: 101 KANMKIAFLSQEFEVSMSRTVKEEFMSAFKEEMEIAERLEK 141