BLASTX nr result

ID: Dioscorea21_contig00001724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001724
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   412   e-113
ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   410   e-112
gb|ABB55374.1| ribosomal protein L2-like [Solanum tuberosum]          409   e-112
ref|NP_001234115.1| 60S ribosomal protein L8 [Solanum lycopersic...   409   e-112
ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus ...   408   e-111

>ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  412 bits (1060), Expect = e-113
 Identities = 194/204 (95%), Positives = 203/204 (99%)
 Frame = -3

Query: 931 MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 752
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 751 VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGRKATLMVGNVLPLRSIPEGAVVCNVEHHV 572
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLIVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 571 GDRGVLARASGDYAIVISHNPDNGTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 392
           GDRGV ARASGDYAIV+SHNPDNGT+RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVVSHNPDNGTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 391 KAGNAYHKFRVKRNCWPKVRGVAM 320
           KAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAM 204


>ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
           gi|147864499|emb|CAN80494.1| hypothetical protein
           VITISV_021173 [Vitis vinifera]
          Length = 260

 Score =  410 bits (1055), Expect = e-112
 Identities = 193/204 (94%), Positives = 202/204 (99%)
 Frame = -3

Query: 931 MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 752
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+TEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 751 VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGRKATLMVGNVLPLRSIPEGAVVCNVEHHV 572
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCG+KA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 571 GDRGVLARASGDYAIVISHNPDNGTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 392
           GDRGV ARASGDY+IV+SHNPDNGT+RIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYSIVVSHNPDNGTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 391 KAGNAYHKFRVKRNCWPKVRGVAM 320
           KAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAM 204


>gb|ABB55374.1| ribosomal protein L2-like [Solanum tuberosum]
          Length = 261

 Score =  409 bits (1052), Expect = e-112
 Identities = 193/204 (94%), Positives = 201/204 (98%)
 Frame = -3

Query: 931 MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 752
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 751 VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGRKATLMVGNVLPLRSIPEGAVVCNVEHHV 572
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCG+KATLMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 571 GDRGVLARASGDYAIVISHNPDNGTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 392
           GDRGV AR SGDYAIVISHNPDNGTTR+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 391 KAGNAYHKFRVKRNCWPKVRGVAM 320
           KAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAM 204


>ref|NP_001234115.1| 60S ribosomal protein L8 [Solanum lycopersicum]
           gi|266944|sp|P29766.1|RL8_SOLLC RecName: Full=60S
           ribosomal protein L8; AltName: Full=L2; AltName:
           Full=Ribosomal protein TL2 gi|19343|emb|CAA45863.1|
           ribosomal protein L2 [Solanum lycopersicum]
          Length = 260

 Score =  409 bits (1052), Expect = e-112
 Identities = 193/204 (94%), Positives = 201/204 (98%)
 Frame = -3

Query: 931 MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 752
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 751 VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGRKATLMVGNVLPLRSIPEGAVVCNVEHHV 572
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCG+KATLMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 571 GDRGVLARASGDYAIVISHNPDNGTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 392
           GDRGV AR SGDYAIVISHNPDNGTTR+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 391 KAGNAYHKFRVKRNCWPKVRGVAM 320
           KAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAM 204


>ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus communis]
           gi|223534353|gb|EEF36062.1| 60S ribosomal protein L8,
           putative [Ricinus communis]
          Length = 261

 Score =  408 bits (1048), Expect = e-111
 Identities = 190/204 (93%), Positives = 200/204 (98%)
 Frame = -3

Query: 931 MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLAR 752
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+T+IIHDPGRGAPLA+
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 751 VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGRKATLMVGNVLPLRSIPEGAVVCNVEHHV 572
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCG+KA LMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 571 GDRGVLARASGDYAIVISHNPDNGTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 392
           GDRG  AR SGDYAIVISHNPDNGTTR+KLPSGAKKIVPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGAFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPML 180

Query: 391 KAGNAYHKFRVKRNCWPKVRGVAM 320
           KAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAM 204


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