BLASTX nr result

ID: Dioscorea21_contig00001714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001714
         (1844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89242.1| predicted protein [Hordeum vulgare subsp. vulgare]    600   e-169
ref|XP_003577725.1| PREDICTED: GDP-L-galactose phosphorylase 1-l...   598   e-168
ref|XP_002442954.1| hypothetical protein SORBIDRAFT_08g005410 [S...   590   e-166
gb|ACN28924.1| unknown [Zea mays] gi|413942046|gb|AFW74695.1| VT...   588   e-165
ref|NP_001150222.1| VTC2 [Zea mays] gi|195637646|gb|ACG38291.1| ...   588   e-165

>dbj|BAJ89242.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 431

 Score =  600 bits (1548), Expect = e-169
 Identities = 305/423 (72%), Positives = 349/423 (82%), Gaps = 5/423 (1%)
 Frame = -2

Query: 1525 MESVLTIKRVPTMVSNYQEEAGQELGCGRNCLGECCLLVSKLPLYAIGSE----ADGNEL 1358
            ME  LTIKRV T++SNYQEE     GCGRNCLG+CCL  SKLPLYA  ++    A  +EL
Sbjct: 1    MEVKLTIKRVATVLSNYQEEGAG--GCGRNCLGDCCLPASKLPLYAFKADPKKPAQDDEL 58

Query: 1357 PAGFFLNTLLLGQWEDRMSRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFRV 1178
            P  FFLN+LLL QWEDR++RGLFRYDVTACETKVIPGE GF+AQLNEGRHLKKRPTEFRV
Sbjct: 59   PTEFFLNSLLLAQWEDRVARGLFRYDVTACETKVIPGELGFVAQLNEGRHLKKRPTEFRV 118

Query: 1177 DRVLQSFDPSKFNFTKVGQEEVLFRFEASADGKTQYFERA-LVDKNHSPSVLAINVSPIE 1001
            DRVLQ FD +KFNFTKVGQEEVLFRFE      + + E A  ++ + +PSV+AINVSPIE
Sbjct: 119  DRVLQPFDSAKFNFTKVGQEEVLFRFENGGGDSSYFLENAPSIEGDRAPSVVAINVSPIE 178

Query: 1000 YGHVLLIPRVLDCLPQRIDPENFLLALHMAVEAGSPYFRLGYNSLGAFATINHLHFQAYY 821
            YGHVLLIPRVLD LPQ+IDPE+FLLALHMA EA SPYFRLGYNSLGAFATINHLHFQAYY
Sbjct: 179  YGHVLLIPRVLDRLPQQIDPESFLLALHMAAEAASPYFRLGYNSLGAFATINHLHFQAYY 238

Query: 820  LSVPLPVEKVPTQAIPISKGLEKSGVKISYLLNYPVRALVYEGGNSLKDLADLVATSCIC 641
            LSVP PVEK PT+ IP++K    SGVK+S L N+PVR LV+E GN+LKDLAD+V  +CI 
Sbjct: 239  LSVPFPVEKAPTKKIPLAKCALNSGVKVSKLTNFPVRGLVFERGNTLKDLADVVTNACIW 298

Query: 640  LQENNIPFNVLISDSGRRIFLFPQCYAEKQALAEVSQEILDTQVNPAVWEISGHMVLKRK 461
            LQENN+PFNVLISDSGRRIF+FPQCYAEKQAL EVSQ++LDTQVNPAVWEISGH+VLKR+
Sbjct: 299  LQENNVPFNVLISDSGRRIFVFPQCYAEKQALGEVSQDLLDTQVNPAVWEISGHIVLKRR 358

Query: 460  VDYEGASEEYAWRILAEVSLSEERFQEVQAYIFNAAGLVESGKQENDANEKKKTPIPTSQ 281
             D+E ASE  AWR+LAEVSLSEERF+EV+A IF AAGL ES ++E    E  + P  +S 
Sbjct: 359  TDFEEASEASAWRLLAEVSLSEERFEEVKACIFQAAGLTESDEEE----ESNEPPYASSS 414

Query: 280  PLP 272
             +P
Sbjct: 415  SVP 417


>ref|XP_003577725.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium
            distachyon]
          Length = 434

 Score =  598 bits (1541), Expect = e-168
 Identities = 304/428 (71%), Positives = 352/428 (82%), Gaps = 7/428 (1%)
 Frame = -2

Query: 1525 MESVLTIKRVPTMVSNYQEEAGQELGCGRNCLGECCLLVSKLPLYAIGSE-----ADGNE 1361
            ME  LTIKRVPT++SNYQEE G   GCGRNCLG+CCL  SKLPLYA  +      A  + 
Sbjct: 1    MEVKLTIKRVPTVLSNYQEEGGGA-GCGRNCLGDCCLPASKLPLYAFKASNQNKFAQEDG 59

Query: 1360 LPAGFFLNTLLLGQWEDRMSRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFR 1181
            LP  FFLN+LLLGQWEDRM++GLFRYDVTACETKVIPGE GF+AQLNEGRHLKKRPTEFR
Sbjct: 60   LPTDFFLNSLLLGQWEDRMAQGLFRYDVTACETKVIPGELGFVAQLNEGRHLKKRPTEFR 119

Query: 1180 VDRVLQSFDPSKFNFTKVGQEEVLFRFEASADGKTQYFERAL--VDKNHSPSVLAINVSP 1007
            VDRVLQ F  +KFNFTKVGQEEVLFRFE +  G + YF   +   + +H PSV+AINVSP
Sbjct: 120  VDRVLQPFHSAKFNFTKVGQEEVLFRFE-NGGGDSSYFLANVPNTESSHPPSVVAINVSP 178

Query: 1006 IEYGHVLLIPRVLDCLPQRIDPENFLLALHMAVEAGSPYFRLGYNSLGAFATINHLHFQA 827
            IEYGHVLLIPRVLD LPQRIDPE+FLLALHMA EA SPYFRLGYNSLGAFATINHLHFQA
Sbjct: 179  IEYGHVLLIPRVLDRLPQRIDPESFLLALHMAAEAASPYFRLGYNSLGAFATINHLHFQA 238

Query: 826  YYLSVPLPVEKVPTQAIPISKGLEKSGVKISYLLNYPVRALVYEGGNSLKDLADLVATSC 647
            YYLSVP PVEK PT+ IP++K   KSGVK+S L+N+PVR LV+E GN+LKDL D+V  +C
Sbjct: 239  YYLSVPFPVEKAPTKKIPLAKCELKSGVKVSKLMNFPVRGLVFERGNTLKDLGDVVTNAC 298

Query: 646  ICLQENNIPFNVLISDSGRRIFLFPQCYAEKQALAEVSQEILDTQVNPAVWEISGHMVLK 467
            I LQ+NN+PFNVLISDSG++IF+FPQCYAEKQAL EVSQ++LDTQVNPAVWEISGH+VLK
Sbjct: 299  IWLQDNNVPFNVLISDSGQKIFIFPQCYAEKQALGEVSQDLLDTQVNPAVWEISGHIVLK 358

Query: 466  RKVDYEGASEEYAWRILAEVSLSEERFQEVQAYIFNAAGLVESGKQENDANEKKKTPIPT 287
            R+ D+E ASE  AWR+LAEVSLSEERF+EV+A IF   GL ES  +E++ NE+      +
Sbjct: 359  RRADFEEASEASAWRLLAEVSLSEERFEEVKACIFQGTGLTES-DEEDETNEESPYASSS 417

Query: 286  SQPLPTPY 263
            S P+ + +
Sbjct: 418  SAPVASSH 425


>ref|XP_002442954.1| hypothetical protein SORBIDRAFT_08g005410 [Sorghum bicolor]
            gi|241943647|gb|EES16792.1| hypothetical protein
            SORBIDRAFT_08g005410 [Sorghum bicolor]
          Length = 435

 Score =  590 bits (1520), Expect = e-166
 Identities = 301/435 (69%), Positives = 355/435 (81%), Gaps = 10/435 (2%)
 Frame = -2

Query: 1525 MESVLTIKRVPTMVSNYQEEAGQ-ELGCGRNCLGECCLLVSKLPLYAIG---SEADGNEL 1358
            ME  LTIKRVPT+VSNYQ++A +   GCGRNCLG+CCL  SKLPLYA     ++      
Sbjct: 1    MEMKLTIKRVPTVVSNYQDDADKPRAGCGRNCLGDCCLPASKLPLYAFKLNPAKRSQEGA 60

Query: 1357 PAGFFLNTLLLGQWEDRMSRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFRV 1178
             +   L  +LL +WEDRM+RGLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFRV
Sbjct: 61   ASTKLLVDILLSEWEDRMARGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFRV 120

Query: 1177 DRVLQSFDPSKFNFTKVGQEEVLFRFEASADGKTQYF--ERALVDKNHSPSVLAINVSPI 1004
            DRVLQ FDP+KFNFTKVGQEEVLF+FE + DG   YF  +  ++  + +P+V+AINVSPI
Sbjct: 121  DRVLQPFDPAKFNFTKVGQEEVLFQFE-NGDGDDSYFLNDAPIIAVDRAPNVVAINVSPI 179

Query: 1003 EYGHVLLIPRVLDCLPQRIDPENFLLALHMAVEAGSPYFRLGYNSLGAFATINHLHFQAY 824
            EYGHVLLIPRVLD LPQ+IDPE+FLLAL MA EA SPYFRLGYNSLGAFATINHLHFQAY
Sbjct: 180  EYGHVLLIPRVLDRLPQKIDPESFLLALQMAAEAASPYFRLGYNSLGAFATINHLHFQAY 239

Query: 823  YLSVPLPVEKVPTQAIPISKGLEKSGVKISYLLNYPVRALVYEGGNSLKDLADLVATSCI 644
            YLSVP PVEK  T  IP+S+   K+GV +S L+NYPVR LV+EGGN+L+DLA++V+ +CI
Sbjct: 240  YLSVPFPVEKAATLKIPLSEDTMKNGVTVSKLINYPVRGLVFEGGNTLEDLANVVSNACI 299

Query: 643  CLQENNIPFNVLISDSGRRIFLFPQCYAEKQALAEVSQEILDTQVNPAVWEISGHMVLKR 464
             LQ+NN+P+NVLISD G+R+FLFPQCYAEKQAL EVSQE+LDTQVNPAVWEISGH+VLKR
Sbjct: 300  WLQDNNVPYNVLISDCGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHIVLKR 359

Query: 463  KVDYEGASEEYAWRILAEVSLSEERFQEVQAYIFNAAGLVESGKQENDANEKKKT----P 296
            + DYE ASE  AW++LAEVSLSEERF+EV+AYIF+AAGLV S ++E +A+E K T    P
Sbjct: 360  RSDYEEASETSAWKLLAEVSLSEERFEEVKAYIFSAAGLVLSDEEEEEASEGKGTTTFAP 419

Query: 295  IPTSQPLPTPYAEKC 251
            +P S   P P AE C
Sbjct: 420  VPVS---PMPVAEGC 431


>gb|ACN28924.1| unknown [Zea mays] gi|413942046|gb|AFW74695.1| VTC2 [Zea mays]
          Length = 435

 Score =  588 bits (1517), Expect = e-165
 Identities = 298/431 (69%), Positives = 353/431 (81%), Gaps = 6/431 (1%)
 Frame = -2

Query: 1525 MESVLTIKRVPTMVSNYQEEAGQ-ELGCGRNCLGECCLLVSKLPLYAIG-SEADGNELPA 1352
            ME  LTI+RVPT+VSNYQE+A +   GCGRNCLG+CCL  SKLPLYA   + A G++  A
Sbjct: 1    MEMKLTIRRVPTVVSNYQEDADKPRAGCGRNCLGDCCLPASKLPLYAFKLTPAKGSQEDA 60

Query: 1351 GF--FLNTLLLGQWEDRMSRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFRV 1178
                 L  +LL +WEDRM+RGLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFRV
Sbjct: 61   ASTKLLVDILLSEWEDRMTRGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFRV 120

Query: 1177 DRVLQSFDPSKFNFTKVGQEEVLFRFEASADGKTQYFERA-LVDKNHSPSVLAINVSPIE 1001
            DRVLQ FDP+KFNFTKVGQEEVLF+FE S    + +   A ++  + +P+V+AINVSPIE
Sbjct: 121  DRVLQPFDPAKFNFTKVGQEEVLFQFENSGGDDSYFLNNAPIIAVDRAPNVIAINVSPIE 180

Query: 1000 YGHVLLIPRVLDCLPQRIDPENFLLALHMAVEAGSPYFRLGYNSLGAFATINHLHFQAYY 821
            YGHVLLIPRVLD LPQRIDPE+FLLAL MA E GSPYFRLGYNSLGAFATINHLHFQAYY
Sbjct: 181  YGHVLLIPRVLDRLPQRIDPESFLLALQMAAEGGSPYFRLGYNSLGAFATINHLHFQAYY 240

Query: 820  LSVPLPVEKVPTQAIPISKGLEKSGVKISYLLNYPVRALVYEGGNSLKDLADLVATSCIC 641
            LSVP PVEK  T  IP+S+  +K+GV +S L+NYPVR LV+EGGN+L DLA +V+ +CI 
Sbjct: 241  LSVPFPVEKAATHKIPLSEDTKKNGVTVSKLINYPVRGLVFEGGNTLDDLATVVSNACIW 300

Query: 640  LQENNIPFNVLISDSGRRIFLFPQCYAEKQALAEVSQEILDTQVNPAVWEISGHMVLKRK 461
            LQ+NN+P+NVLISD G+R+FLFPQCYAEKQAL EVSQE+LDTQVNPAVWEISGHMVLKR+
Sbjct: 301  LQDNNVPYNVLISDCGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHMVLKRR 360

Query: 460  VDYEGASEEYAWRILAEVSLSEERFQEVQAYIFNAAGLVESGKQENDANE-KKKTPIPTS 284
            +DYE ASE  AW++LAEVSLSEERF+EV+AYIF+AAGLV+  ++E +A++ +  T     
Sbjct: 361  MDYEEASETSAWKLLAEVSLSEERFEEVKAYIFSAAGLVQYDEEEEEASDGEGPTAYVPV 420

Query: 283  QPLPTPYAEKC 251
            +  P P AE C
Sbjct: 421  KVTPLPVAEGC 431


>ref|NP_001150222.1| VTC2 [Zea mays] gi|195637646|gb|ACG38291.1| VTC2 [Zea mays]
          Length = 435

 Score =  588 bits (1517), Expect = e-165
 Identities = 298/431 (69%), Positives = 353/431 (81%), Gaps = 6/431 (1%)
 Frame = -2

Query: 1525 MESVLTIKRVPTMVSNYQEEAGQ-ELGCGRNCLGECCLLVSKLPLYAIG-SEADGNELPA 1352
            ME  LTI+RVPT+VSNYQE+A +   GCGRNCLG+CCL  SKLPLYA   + A G++  A
Sbjct: 1    MEMKLTIRRVPTVVSNYQEDADKPRAGCGRNCLGDCCLPASKLPLYAFKLTPAKGSQEDA 60

Query: 1351 GF--FLNTLLLGQWEDRMSRGLFRYDVTACETKVIPGEHGFIAQLNEGRHLKKRPTEFRV 1178
                 L  +LL +WEDRM+RGLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFRV
Sbjct: 61   ASTKLLVDILLSEWEDRMTRGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFRV 120

Query: 1177 DRVLQSFDPSKFNFTKVGQEEVLFRFEASADGKTQYFERA-LVDKNHSPSVLAINVSPIE 1001
            DRVLQ FDP+KFNFTKVGQEEVLF+FE S    + +   A ++  + +P+V+AINVSPIE
Sbjct: 121  DRVLQPFDPAKFNFTKVGQEEVLFQFENSGGDDSYFLNNAPIIAVDRAPNVIAINVSPIE 180

Query: 1000 YGHVLLIPRVLDCLPQRIDPENFLLALHMAVEAGSPYFRLGYNSLGAFATINHLHFQAYY 821
            YGHVLLIPRVLD LPQRIDPE+FLLAL MA E GSPYFRLGYNSLGAFATINHLHFQAYY
Sbjct: 181  YGHVLLIPRVLDRLPQRIDPESFLLALQMAAEGGSPYFRLGYNSLGAFATINHLHFQAYY 240

Query: 820  LSVPLPVEKVPTQAIPISKGLEKSGVKISYLLNYPVRALVYEGGNSLKDLADLVATSCIC 641
            LSVP PVEK  T  IP+S+  +K+GV +S L+NYPVR LV+EGGN+L DLA +V+ +CI 
Sbjct: 241  LSVPFPVEKAATHKIPLSEDTKKNGVTVSKLINYPVRGLVFEGGNTLDDLATVVSNACIW 300

Query: 640  LQENNIPFNVLISDSGRRIFLFPQCYAEKQALAEVSQEILDTQVNPAVWEISGHMVLKRK 461
            LQ+NN+P+NVLISD G+R+FLFPQCYAEKQAL EVSQE+LDTQVNPAVWEISGHMVLKR+
Sbjct: 301  LQDNNVPYNVLISDCGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHMVLKRR 360

Query: 460  VDYEGASEEYAWRILAEVSLSEERFQEVQAYIFNAAGLVESGKQENDANE-KKKTPIPTS 284
            +DYE ASE  AW++LAEVSLSEERF+EV+AYIF+AAGLV+  ++E +A++ +  T     
Sbjct: 361  MDYEEASETSAWKLLAEVSLSEERFEEVKAYIFSAAGLVQYDEEEEEASDGEGPTAYVPV 420

Query: 283  QPLPTPYAEKC 251
            +  P P AE C
Sbjct: 421  KVTPLPIAEGC 431


Top