BLASTX nr result
ID: Dioscorea21_contig00001713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00001713
(669 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera] 103 3e-20
emb|CBI26124.3| unnamed protein product [Vitis vinifera] 101 1e-19
gb|AFW76960.1| hypothetical protein ZEAMMB73_111838 [Zea mays] 91 2e-16
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551... 83 4e-14
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551... 83 4e-14
>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
Length = 771
Score = 103 bits (257), Expect = 3e-20
Identities = 83/230 (36%), Positives = 104/230 (45%), Gaps = 14/230 (6%)
Frame = +1
Query: 16 GKTSETHERENKDA-------------LRRPSGNDNGTGVWPQAFAPSNMPFKEHHLKQL 156
G TS T NK A LR + D G PQA S MPFKE HLKQL
Sbjct: 390 GGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQL 449
Query: 157 RAQCLVFLAFRNNLIPRRLHLEIALGGSFPKEDRGADASSKEPINSHDGSGMLVKPNDNA 336
RAQCLVFLA RNNL+P++LHLEIALG +PKE D KE I+ H G + N
Sbjct: 450 RAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELID-HKGKDYSLNEPSNV 508
Query: 337 RAQPXXXXXXXXXXXXXXXXXXXXXXIRRSPNSDSFLL-PEENRQFSALKQNSFSQIQTQ 513
P R S D+ + PEE R A+++ + + TQ
Sbjct: 509 PEVPVPFG-------------------RLSNVRDTERIPPEERRHILAMRRKPEADMHTQ 549
Query: 514 EIAESCAVSATPQEADTLTHVARGTLDSHQRREGSGHTILQASWMNQVYS 663
E+AES A +T + D+ + + H+ S H LQ NQ S
Sbjct: 550 EVAESQAFPSTASQPDS-SSIMGLXASPHEDNLESSH--LQVGRANQASS 596
>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
Length = 2266
Score = 101 bits (252), Expect = 1e-19
Identities = 84/245 (34%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Frame = +1
Query: 16 GKTSETHERENKDA-------------LRRPSGNDNGTGVWPQAFAPSNMPFKEHHLKQL 156
G TS T NK A LR + D G PQA S MPFKE HLKQL
Sbjct: 356 GGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQL 415
Query: 157 RAQCLVFLAFRNNLIPRRLHLEIALGGSFPKED-------------RGADASSKEPINSH 297
RAQCLVFLA RNNL+P++LHLEIALG +PKE +G D S EP N
Sbjct: 416 RAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKDYSLNEPSNVP 475
Query: 298 DGS---GMLVKPNDNARAQPXXXXXXXXXXXXXXXXXXXXXXIRRSPNSDSFLLPEENRQ 468
+ G L D R P I + + EE R
Sbjct: 476 EVPVPFGRLSNVRDTERIPPGSSSSGSLLETDSMSKAGENTKIMEDNLTG---IAEERRH 532
Query: 469 FSALKQNSFSQIQTQEIAESCAVSATPQEADTLTHVARGTLDSHQRREGSGHTILQASWM 648
A+++ + + TQE+AES A +T + D+ + + T H+ S H LQ
Sbjct: 533 ILAMRRKPEADMHTQEVAESQAFPSTASQPDS-SSIMGLTASPHEDNLESSH--LQVGRA 589
Query: 649 NQVYS 663
NQ S
Sbjct: 590 NQASS 594
>gb|AFW76960.1| hypothetical protein ZEAMMB73_111838 [Zea mays]
Length = 951
Score = 90.9 bits (224), Expect = 2e-16
Identities = 63/165 (38%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Frame = +1
Query: 61 RRPSG-NDNGTGVWPQAFAPSNMPFKEHHLKQLRAQCLVFLAFRNNLIPRRLHLEIALG- 234
RRPS TG P + SN PFKE LKQLRAQCLVFLAFRNNL PR++HLEIALG
Sbjct: 453 RRPSSLPSRSTGPSPMSHISSNTPFKEQQLKQLRAQCLVFLAFRNNLQPRKVHLEIALGR 512
Query: 235 ---------GSFPKEDRGADASSKEPINSHDGSGMLVKPNDNARAQPXXXXXXXXXXXXX 387
G E R +DA KE +S + SG+ + D +R
Sbjct: 513 GPPAESDSAGQRGSEGRVSDALGKENGSSRENSGVFCRQTDISRLPATSAGSIAEDDSLS 572
Query: 388 XXXXXXXXXIRRSPNSDSFLLPEENRQFSALKQNSFSQIQTQEIA 522
I+ + S L+ EN Q +++ Q + S++++QE A
Sbjct: 573 KDPENATKKIKLAEQEKS-LMEVENVQQASVMQGTSSEMRSQETA 616
>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
Helicase swr1 [Medicago truncatula]
Length = 3310
Score = 83.2 bits (204), Expect = 4e-14
Identities = 70/204 (34%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Frame = +1
Query: 88 TGVWPQAFAPSNMPFKEHHLKQLRAQCLVFLAFRNNLIPRRLHLEIALGGSFPKED---- 255
TG P A S MPFKE+ LKQLRAQCLVFLAFRN L P++LHLE+A G F +ED
Sbjct: 398 TGKSPVPAASSTMPFKENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNK 457
Query: 256 -----RGADASSKEPINSHD-----GSGMLVKPNDNARAQPXXXXXXXXXXXXXXXXXXX 405
+G S EP N GS ++P D +
Sbjct: 458 DSNDPKGKSQSFSEPGNMPGVIMPFGSSSNLRPTDKNPSGSSAGKFLEAESFMKGTDGTR 517
Query: 406 XXXIRRSPNSDSFLLPEENRQFSALKQNSFSQIQTQEIAESCAVSATP-QEADTLTHVAR 582
+ + +SD P E+ + A K++ +IQ + A+S SATP Q+ D+ + +R
Sbjct: 518 LLEDKGNLHSD-IQTPSEDSKHLAAKRDVERRIQERVAAQSS--SATPYQQKDSSS--SR 572
Query: 583 GTLDSHQRREGSGHTILQASWMNQ 654
G + + + S + IL A NQ
Sbjct: 573 GIVVGNSNLDDSDNGILTAGRANQ 596
>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
Helicase swr1 [Medicago truncatula]
Length = 3312
Score = 83.2 bits (204), Expect = 4e-14
Identities = 70/204 (34%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Frame = +1
Query: 88 TGVWPQAFAPSNMPFKEHHLKQLRAQCLVFLAFRNNLIPRRLHLEIALGGSFPKED---- 255
TG P A S MPFKE+ LKQLRAQCLVFLAFRN L P++LHLE+A G F +ED
Sbjct: 398 TGKSPVPAASSTMPFKENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNK 457
Query: 256 -----RGADASSKEPINSHD-----GSGMLVKPNDNARAQPXXXXXXXXXXXXXXXXXXX 405
+G S EP N GS ++P D +
Sbjct: 458 DSNDPKGKSQSFSEPGNMPGVIMPFGSSSNLRPTDKNPSGSSAGKFLEAESFMKGTDGTR 517
Query: 406 XXXIRRSPNSDSFLLPEENRQFSALKQNSFSQIQTQEIAESCAVSATP-QEADTLTHVAR 582
+ + +SD P E+ + A K++ +IQ + A+S SATP Q+ D+ + +R
Sbjct: 518 LLEDKGNLHSD-IQTPSEDSKHLAAKRDVERRIQERVAAQSS--SATPYQQKDSSS--SR 572
Query: 583 GTLDSHQRREGSGHTILQASWMNQ 654
G + + + S + IL A NQ
Sbjct: 573 GIVVGNSNLDDSDNGILTAGRANQ 596