BLASTX nr result

ID: Dioscorea21_contig00001662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001662
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF98543.1| expressed protein [Oryza sativa Japonica Group] g...   390   e-106
ref|NP_001050050.1| Os03g0337700 [Oryza sativa Japonica Group] g...   388   e-105
ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis ...   388   e-105
ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis s...   385   e-105
ref|XP_003560623.1| PREDICTED: GPN-loop GTPase 3-like [Brachypod...   382   e-103

>gb|ABF98543.1| expressed protein [Oryza sativa Japonica Group]
            gi|215769078|dbj|BAH01307.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218193640|gb|EEC76067.1|
            hypothetical protein OsI_13279 [Oryza sativa Indica
            Group] gi|222625678|gb|EEE59810.1| hypothetical protein
            OsJ_12343 [Oryza sativa Japonica Group]
          Length = 266

 Score =  390 bits (1002), Expect = e-106
 Identities = 195/275 (70%), Positives = 215/275 (78%)
 Frame = -3

Query: 1023 MGYAQLVIGPAGSGKSTYCSSLYQHCETIRRTMHIVNLDPAAEHFDYPVAMDIRELISLD 844
            MGYAQLVIGPAGSGKSTYCSSLYQHCET+ RT+H+VNLDPAAEHF YPV+ DIRELISLD
Sbjct: 1    MGYAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLD 60

Query: 843  DVMEELGLGPNGGLIYCMEHLEENLDDWXXXXXXXXXXXXXLVFDCPGQIELFSHVPVLR 664
            DVMEELG+GPNGGLIYCMEHLE+NLDDW             LVFDCPGQIELF+HVPVLR
Sbjct: 61   DVMEELGMGPNGGLIYCMEHLEDNLDDWLDEQLEGYLDDDYLVFDCPGQIELFTHVPVLR 120

Query: 663  NFVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCMASLSAMIQLELPHVNI 484
            NFV+H                                    GCMASLSAMIQLELPH+NI
Sbjct: 121  NFVEH---------LKRKNFNVCAVYLLDSQFVSDVTKYISGCMASLSAMIQLELPHINI 171

Query: 483  LSKMDLVTNKKDIENYLNPEATTLLSELNQNMAPKFAKLNKALAGLVDEFSMVNFVPLDL 304
            LSKMDLV+NKKD+E YLNPEA  LLS+LN+ MAP F KLNK+LA LVD++SMVNF+PLDL
Sbjct: 172  LSKMDLVSNKKDVEEYLNPEAQVLLSQLNRQMAPNFGKLNKSLAELVDDYSMVNFIPLDL 231

Query: 303  RKESSIQYVLSYIDNCIQYGEDADVKIRDFDQEDD 199
            RKESSIQYVLS+IDNCIQYGEDADVK+RDFD E+D
Sbjct: 232  RKESSIQYVLSHIDNCIQYGEDADVKVRDFDPEED 266


>ref|NP_001050050.1| Os03g0337700 [Oryza sativa Japonica Group]
            gi|108708035|gb|ABF95830.1| expressed protein [Oryza
            sativa Japonica Group] gi|113548521|dbj|BAF11964.1|
            Os03g0337700 [Oryza sativa Japonica Group]
          Length = 265

 Score =  388 bits (997), Expect = e-105
 Identities = 195/274 (71%), Positives = 213/274 (77%)
 Frame = -3

Query: 1023 MGYAQLVIGPAGSGKSTYCSSLYQHCETIRRTMHIVNLDPAAEHFDYPVAMDIRELISLD 844
            MGYAQLVIGPAGSGKSTYCSSLYQHCET+ RT+H+VNLDPAAEHF YPV+ DIRELISLD
Sbjct: 1    MGYAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLD 60

Query: 843  DVMEELGLGPNGGLIYCMEHLEENLDDWXXXXXXXXXXXXXLVFDCPGQIELFSHVPVLR 664
            DVMEELG+GPNGGLIYCMEHLE+NLDDW             LVFDCPGQIELF+HVPVLR
Sbjct: 61   DVMEELGMGPNGGLIYCMEHLEDNLDDWLDEQLDGYLDDDYLVFDCPGQIELFTHVPVLR 120

Query: 663  NFVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCMASLSAMIQLELPHVNI 484
            NFV+H                                    GCMASLSAMIQLELPH+NI
Sbjct: 121  NFVEH---------LKRKNFNVCAVYFLDSQFVSDVTKYISGCMASLSAMIQLELPHINI 171

Query: 483  LSKMDLVTNKKDIENYLNPEATTLLSELNQNMAPKFAKLNKALAGLVDEFSMVNFVPLDL 304
            LSKMDLV NKKD+E YLNPEA  LLS+LN+ MAPKF KLNK+LA LVD++SMVNF+PLDL
Sbjct: 172  LSKMDLVANKKDVEEYLNPEAQVLLSQLNRQMAPKFGKLNKSLAELVDDYSMVNFIPLDL 231

Query: 303  RKESSIQYVLSYIDNCIQYGEDADVKIRDFDQED 202
            RKESSIQYVLS+IDNCIQYG DADVK+RDFD ED
Sbjct: 232  RKESSIQYVLSHIDNCIQYGVDADVKVRDFDPED 265


>ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis vinifera]
            gi|296088830|emb|CBI38288.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  388 bits (996), Expect = e-105
 Identities = 195/275 (70%), Positives = 217/275 (78%)
 Frame = -3

Query: 1023 MGYAQLVIGPAGSGKSTYCSSLYQHCETIRRTMHIVNLDPAAEHFDYPVAMDIRELISLD 844
            MG+AQLVIGPAGSGKSTYCSSLYQHCET+RRT+HIVNLDPAAE FDYPVAMDIREL+SLD
Sbjct: 1    MGFAQLVIGPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIRELVSLD 60

Query: 843  DVMEELGLGPNGGLIYCMEHLEENLDDWXXXXXXXXXXXXXLVFDCPGQIELFSHVPVLR 664
            DVMEELGLGPNGGL+YCMEHLEENLDDW             LVFDCPGQIELFSHVP+LR
Sbjct: 61   DVMEELGLGPNGGLMYCMEHLEENLDDWLTDELDNYLDDDYLVFDCPGQIELFSHVPMLR 120

Query: 663  NFVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCMASLSAMIQLELPHVNI 484
            NFVDH                                    GCMASLSAM+QLELPHVNI
Sbjct: 121  NFVDH---------LKRKNFNVCAVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNI 171

Query: 483  LSKMDLVTNKKDIENYLNPEATTLLSELNQNMAPKFAKLNKALAGLVDEFSMVNFVPLDL 304
            LSKMDLVTNK+DIE+YLNPE   LLSELNQ MAP+F KLNKAL  LVDE+SMV+F+PLDL
Sbjct: 172  LSKMDLVTNKRDIEDYLNPEPRFLLSELNQRMAPQFGKLNKALIELVDEYSMVSFLPLDL 231

Query: 303  RKESSIQYVLSYIDNCIQYGEDADVKIRDFDQEDD 199
            RKESSI+Y+LS IDNCIQ+GEDADVK++DF++++D
Sbjct: 232  RKESSIRYILSQIDNCIQFGEDADVKVKDFEEDED 266


>ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus]
            gi|449524838|ref|XP_004169428.1| PREDICTED: GPN-loop
            GTPase 3-like [Cucumis sativus]
          Length = 268

 Score =  385 bits (990), Expect = e-105
 Identities = 194/275 (70%), Positives = 216/275 (78%)
 Frame = -3

Query: 1023 MGYAQLVIGPAGSGKSTYCSSLYQHCETIRRTMHIVNLDPAAEHFDYPVAMDIRELISLD 844
            MGYAQLVIGPAGSGKSTYCSSLYQHCET+ RTMH+VNLDPAAE+FDYPVAMDIRELISL+
Sbjct: 1    MGYAQLVIGPAGSGKSTYCSSLYQHCETVGRTMHVVNLDPAAENFDYPVAMDIRELISLE 60

Query: 843  DVMEELGLGPNGGLIYCMEHLEENLDDWXXXXXXXXXXXXXLVFDCPGQIELFSHVPVLR 664
            DVMEELGLGPNGGL+YCMEHLEENLDDW             LVFDCPGQIELFSHVPVL+
Sbjct: 61   DVMEELGLGPNGGLLYCMEHLEENLDDWLTEELNNYMDDDYLVFDCPGQIELFSHVPVLK 120

Query: 663  NFVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCMASLSAMIQLELPHVNI 484
            NFV+H                                    GCMASLSAM+QLELPH+NI
Sbjct: 121  NFVEH---------LKRKNFNVCAVYLLDSQFMTDITKFISGCMASLSAMVQLELPHINI 171

Query: 483  LSKMDLVTNKKDIENYLNPEATTLLSELNQNMAPKFAKLNKALAGLVDEFSMVNFVPLDL 304
            LSKMDLVT K+DIE++LNPE   LLSELNQ MAP+F+KLNKAL  LVDE++MV+FVPLDL
Sbjct: 172  LSKMDLVTKKRDIEDFLNPEPQVLLSELNQRMAPQFSKLNKALIELVDEYNMVSFVPLDL 231

Query: 303  RKESSIQYVLSYIDNCIQYGEDADVKIRDFDQEDD 199
            RKESSI+YVL+ IDNCIQYGEDADVKI+DFD ++D
Sbjct: 232  RKESSIRYVLAQIDNCIQYGEDADVKIKDFDPDED 266


>ref|XP_003560623.1| PREDICTED: GPN-loop GTPase 3-like [Brachypodium distachyon]
          Length = 266

 Score =  382 bits (981), Expect = e-103
 Identities = 192/275 (69%), Positives = 213/275 (77%)
 Frame = -3

Query: 1023 MGYAQLVIGPAGSGKSTYCSSLYQHCETIRRTMHIVNLDPAAEHFDYPVAMDIRELISLD 844
            MG+AQLVIGPAGSGKSTYCS LYQHCET+ R +H+VNLDPAAEHF YPVA DIRELISLD
Sbjct: 1    MGFAQLVIGPAGSGKSTYCSGLYQHCETVGRRIHMVNLDPAAEHFSYPVATDIRELISLD 60

Query: 843  DVMEELGLGPNGGLIYCMEHLEENLDDWXXXXXXXXXXXXXLVFDCPGQIELFSHVPVLR 664
            DVMEELG+GPNGGLIYCMEHLE+NLDDW             LVFDCPGQIELF+HVPVLR
Sbjct: 61   DVMEELGMGPNGGLIYCMEHLEDNLDDWLDEQLENYLDDDYLVFDCPGQIELFTHVPVLR 120

Query: 663  NFVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCMASLSAMIQLELPHVNI 484
            NFV+H                                    GCMASLSAMIQLELPH+NI
Sbjct: 121  NFVEH---------LKRKNFTVCAVYLLDSQFVSDVTKYISGCMASLSAMIQLELPHINI 171

Query: 483  LSKMDLVTNKKDIENYLNPEATTLLSELNQNMAPKFAKLNKALAGLVDEFSMVNFVPLDL 304
            LSKMDLV+NKKD+E YLNPEA  LLS+LN++MAP+F KLNKALA LVD++SMVNF+PLDL
Sbjct: 172  LSKMDLVSNKKDVEEYLNPEAQVLLSQLNRHMAPRFGKLNKALAELVDDYSMVNFIPLDL 231

Query: 303  RKESSIQYVLSYIDNCIQYGEDADVKIRDFDQEDD 199
            RKESSIQYVLS IDNCIQYGEDADV++RDF  E+D
Sbjct: 232  RKESSIQYVLSCIDNCIQYGEDADVRVRDFIPEED 266


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