BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001661
         (1820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   246   1e-62
ref|XP_002531375.1| RNA and export factor binding protein, putat...   236   2e-59
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]   231   6e-58
ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   221   4e-55
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   219   2e-54

>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  246 bits (628), Expect = 1e-62
 Identities = 141/250 (56%), Positives = 159/250 (63%)
 Frame = +3

Query: 18  MSSALDMSLDDLIKNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVGKAP 197
           MS+ALDMSLDDLIKN+K+                                   YSV KAP
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITP---YSVSKAP 57

Query: 198 DTAWQHDLYSSGDRISAFPPQAAGRASSIELGTKLYISNLDYGVSNEDIKELFSEVGDLK 377
           +T WQHD+++  D+ +A+P QA GR S+IE GTKLYISNLDYGVSNEDIKELFSEVGDLK
Sbjct: 58  ETTWQHDMFA--DQAAAYPAQA-GRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114

Query: 378 RFSIHYDRSGRSKGTAEVVFTRREDAFAAVKRYNNVQLDGKPMKIEVIGTNIVTPAAGPP 557
           R+SIHYDRSGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE++GTNI TPAA PP
Sbjct: 115 RYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPP 174

Query: 558 VVNGGLGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEPPSAETLDADLD 737
           V NG  GNSN                                   + E  SAE LDADL+
Sbjct: 175 VTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRG-RGEKVSAEDLDADLE 233

Query: 738 KYHSDAMQTN 767
           KYHS+AMQ N
Sbjct: 234 KYHSEAMQIN 243


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  236 bits (601), Expect = 2e-59
 Identities = 134/252 (53%), Positives = 152/252 (60%), Gaps = 2/252 (0%)
 Frame = +3

Query: 18  MSSALDMSLDDLIKNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVGKAP 197
           MSSALDMSLDD+IK++KK                                   Y+  KAP
Sbjct: 1   MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAP----YAAAKAP 56

Query: 198 DTAWQHDLYSSGDRISAFPPQAAG--RASSIELGTKLYISNLDYGVSNEDIKELFSEVGD 371
           ++ WQHD+++    +  F  Q  G  RAS IE GTKLYISNL+YGVSNEDIKELFSEVGD
Sbjct: 57  ESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGD 116

Query: 372 LKRFSIHYDRSGRSKGTAEVVFTRREDAFAAVKRYNNVQLDGKPMKIEVIGTNIVTPAAG 551
           LKR+SIHYDRSGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE++GTNI TPAA 
Sbjct: 117 LKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA- 175

Query: 552 PPVVNGGLGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEPPSAETLDAD 731
            P  NG  GNSN                                   + E  SAE LDAD
Sbjct: 176 TPAANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDAD 235

Query: 732 LDKYHSDAMQTN 767
           L+KYHS+AMQTN
Sbjct: 236 LEKYHSEAMQTN 247


>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
          Length = 281

 Score =  231 bits (588), Expect = 6e-58
 Identities = 124/190 (65%), Positives = 139/190 (73%)
 Frame = +3

Query: 18  MSSALDMSLDDLIKNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVGKAP 197
           MS+ALDMSLDDLIKN+K+                                   YSV KAP
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITP---YSVSKAP 57

Query: 198 DTAWQHDLYSSGDRISAFPPQAAGRASSIELGTKLYISNLDYGVSNEDIKELFSEVGDLK 377
           +T WQHD+++  D+ +A+P QA GR S+IE GTKLYISNLDYGVSNEDIKELFSEVGDLK
Sbjct: 58  ETTWQHDMFA--DQAAAYPAQA-GRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114

Query: 378 RFSIHYDRSGRSKGTAEVVFTRREDAFAAVKRYNNVQLDGKPMKIEVIGTNIVTPAAGPP 557
           R+SIHYDRSGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE++GTNI TPAA PP
Sbjct: 115 RYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPP 174

Query: 558 VVNGGLGNSN 587
           V NG  GNSN
Sbjct: 175 VTNGTFGNSN 184


>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  221 bits (564), Expect = 4e-55
 Identities = 127/251 (50%), Positives = 153/251 (60%), Gaps = 1/251 (0%)
 Frame = +3

Query: 18  MSSALDMSLDDLIKNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVGKAP 197
           MS+ALDM+L+D+IKN+KK                                   Y+  KAP
Sbjct: 1   MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLPNRAANRAAP----YAAAKAP 56

Query: 198 DTAWQHDLYSSGDRISAFPPQAAGRASSIELGTKLYISNLDYGVSNEDIKELFSEVGDLK 377
           +TAW+HD+Y++    +A+P    GRASSIE GTKLYISNLDYGVSN+DIKELF EVGD+K
Sbjct: 57  ETAWKHDMYANQPVAAAYP---GGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVK 113

Query: 378 RFSIHYDRSGRSKGTAEVVFTRREDAFAAVKRYNNVQLDGKPMKIEVIGTNIVTPAAGPP 557
           R ++HYDRSGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMK+E++GTNI T AA PP
Sbjct: 114 RHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAA-PP 172

Query: 558 VVNGGLGN-SNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEPPSAETLDADL 734
            VNG  GN +                                    + E  SAE LDADL
Sbjct: 173 AVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADL 232

Query: 735 DKYHSDAMQTN 767
           +KYH++AMQ N
Sbjct: 233 EKYHAEAMQLN 243


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  219 bits (558), Expect = 2e-54
 Identities = 125/252 (49%), Positives = 148/252 (58%), Gaps = 2/252 (0%)
 Frame = +3

Query: 18  MSSALDMSLDDLIKNSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSVGKAP 197
           MS+A+DMSLDD+IKN+KK                                   Y+  KAP
Sbjct: 1   MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAP----YAPAKAP 56

Query: 198 DTAWQHDLYSSGDRISAFPPQAAGRASSIELGTKLYISNLDYGVSNEDIKELFSEVGDLK 377
           +  WQHDLY+     +A  P   GRA+SIE GTKLYISNLDYGVSN+DIKELF+EVGDLK
Sbjct: 57  EATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLK 116

Query: 378 RFSIHYDRSGRSKGTAEVVFTRREDAFAAVKRYNNVQLDGKPMKIEVIGTNIVTPAAGPP 557
           R ++HYDRSGRSKGTAEVVF+RR DA +AVKRYNNVQLDGKPMKIE++GTNI TP    P
Sbjct: 117 RHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-P 175

Query: 558 VVNGGLGNSN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEPPSAETLDAD 731
             NG +GN N                                     + E  SA+ LDAD
Sbjct: 176 APNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDAD 235

Query: 732 LDKYHSDAMQTN 767
           L+KYH++AMQ N
Sbjct: 236 LEKYHAEAMQLN 247