BLASTX nr result

ID: Dioscorea21_contig00001636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001636
         (2403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...   249   e-124
emb|CBI31361.3| unnamed protein product [Vitis vinifera]              249   e-123
ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase s...   256   e-119
ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [S...   247   e-118
gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| T...   242   e-116

>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
            vinifera]
          Length = 399

 Score =  249 bits (636), Expect(2) = e-124
 Identities = 118/177 (66%), Positives = 144/177 (81%)
 Frame = -1

Query: 2397 SILNVGGLHQMLGLHDHVFVASPRDCVECLPESDSANKLGASFETPTGRRHISPAKYMEL 2218
            +I N+GGLHQMLGLH++ F A PRD + CLPE DS NK+GASFETP+GRR I P +YME+
Sbjct: 75   TISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETPSGRRLIKPVEYMEM 134

Query: 2217 ISSQKPNLWASLADEVPAWVPEKRNKTSVDRTLRWLDDCLALDLASGSSMLGSIVGGTSK 2038
            ISS KP+LWA+LADEVPAWV  KRNK SVDRTLRWLD+C+ L  A G ++ G+IVGG + 
Sbjct: 135  ISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSPA-GGAVFGAIVGGANV 193

Query: 2037 QERERCATEVSKRNVAGFWIGGFGLGESMEERPSLLNAVIDSLPEQKLRMISGFGLP 1867
            +ER+RCA EV+ RNV+G+WIGGFGLGESM+ERP+LLNAV D LP ++ R I G  LP
Sbjct: 194  EERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADILPVERPRQICGLELP 250



 Score =  224 bits (570), Expect(2) = e-124
 Identities = 108/144 (75%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
 Frame = -3

Query: 1813 QGVAAGIDLFDSTYVYHLTAGGFALVFPLDNMEKGAFDSQLSDIGSDGTKINLRATIYRK 1634
            QGVAAGIDLFDSTY+YHLT GGFAL FPL+++++  FDS+LSD+GSD TKINLRATIYRK
Sbjct: 255  QGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGSDHTKINLRATIYRK 314

Query: 1633 DTSAIVSNCQCFTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLEFFRSIREAIKCNS 1454
            DT+ IV NC C+TCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYL FFRSIR AIK ++
Sbjct: 315  DTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIRTAIKEDN 374

Query: 1453 FDVFHRRFIKGRRAHLT-SAIAAS 1385
            F+ F + FI  RR HL  +A+ AS
Sbjct: 375  FEQFRQTFIDSRREHLNMTAVCAS 398


>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  249 bits (636), Expect(2) = e-123
 Identities = 118/177 (66%), Positives = 144/177 (81%)
 Frame = -1

Query: 2397 SILNVGGLHQMLGLHDHVFVASPRDCVECLPESDSANKLGASFETPTGRRHISPAKYMEL 2218
            +I N+GGLHQMLGLH++ F A PRD + CLPE DS NK+GASFETP+GRR I P +YME+
Sbjct: 75   TISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETPSGRRLIKPVEYMEM 134

Query: 2217 ISSQKPNLWASLADEVPAWVPEKRNKTSVDRTLRWLDDCLALDLASGSSMLGSIVGGTSK 2038
            ISS KP+LWA+LADEVPAWV  KRNK SVDRTLRWLD+C+ L  A G ++ G+IVGG + 
Sbjct: 135  ISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSPA-GGAVFGAIVGGANV 193

Query: 2037 QERERCATEVSKRNVAGFWIGGFGLGESMEERPSLLNAVIDSLPEQKLRMISGFGLP 1867
            +ER+RCA EV+ RNV+G+WIGGFGLGESM+ERP+LLNAV D LP ++ R I G  LP
Sbjct: 194  EERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADILPVERPRQICGLELP 250



 Score =  222 bits (566), Expect(2) = e-123
 Identities = 105/136 (77%), Positives = 119/136 (87%)
 Frame = -3

Query: 1813 QGVAAGIDLFDSTYVYHLTAGGFALVFPLDNMEKGAFDSQLSDIGSDGTKINLRATIYRK 1634
            QGVAAGIDLFDSTY+YHLT GGFAL FPL+++++  FDS+LSD+GSD TKINLRATIYRK
Sbjct: 255  QGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGSDHTKINLRATIYRK 314

Query: 1633 DTSAIVSNCQCFTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLEFFRSIREAIKCNS 1454
            DT+ IV NC C+TCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYL FFRSIR AIK ++
Sbjct: 315  DTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIRTAIKEDN 374

Query: 1453 FDVFHRRFIKGRRAHL 1406
            F+ F + FI  RR HL
Sbjct: 375  FEQFRQTFIDSRREHL 390


>ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like
            [Brachypodium distachyon]
          Length = 396

 Score =  256 bits (655), Expect(2) = e-119
 Identities = 121/177 (68%), Positives = 148/177 (83%)
 Frame = -1

Query: 2397 SILNVGGLHQMLGLHDHVFVASPRDCVECLPESDSANKLGASFETPTGRRHISPAKYMEL 2218
            +I N+GGLH+MLGL DH+ VA+  D +E LP S+++NK GASFETP GR+ + P+ YMEL
Sbjct: 75   TISNIGGLHRMLGLPDHILVAAAGDSIESLPSSEASNKFGASFETPAGRKLVKPSDYMEL 134

Query: 2217 ISSQKPNLWASLADEVPAWVPEKRNKTSVDRTLRWLDDCLALDLASGSSMLGSIVGGTSK 2038
            IS  +PNLWASLADEVPAWV EKRNKTSV+RTLRWLD CLALD+A+G + LG +VGG+S 
Sbjct: 135  ISCMRPNLWASLADEVPAWVNEKRNKTSVERTLRWLDACLALDVAAGQNTLGVVVGGSSI 194

Query: 2037 QERERCATEVSKRNVAGFWIGGFGLGESMEERPSLLNAVIDSLPEQKLRMISGFGLP 1867
            +ER+RCATEVSKRNV+GFWIGGFGLGE++EER +LLNAV D LP  K R++S  GLP
Sbjct: 195  EERKRCATEVSKRNVSGFWIGGFGLGENVEERCNLLNAVTDCLPSDKPRLVSRLGLP 251



 Score =  201 bits (512), Expect(2) = e-119
 Identities = 92/140 (65%), Positives = 114/140 (81%)
 Frame = -3

Query: 1813 QGVAAGIDLFDSTYVYHLTAGGFALVFPLDNMEKGAFDSQLSDIGSDGTKINLRATIYRK 1634
            +G+A+GIDLFDSTY++ LT GGFAL+FP+D +E+   +   +D   D TKINLR T YRK
Sbjct: 256  EGIASGIDLFDSTYIHQLTMGGFALIFPVDMVEREMQNGIFNDSAGDLTKINLRTTTYRK 315

Query: 1633 DTSAIVSNCQCFTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLEFFRSIREAIKCNS 1454
            DTS IV +C CFTCQNHTRAY+NHLLNVHEMLAQILLEIHNTHHYL FFRSIREAIK   
Sbjct: 316  DTSRIVDSCSCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHHYLHFFRSIREAIKIGE 375

Query: 1453 FDVFHRRFIKGRRAHLTSAI 1394
            FD+F ++F++ RR+ + +A+
Sbjct: 376  FDLFWKQFVENRRSQIAAAV 395


>ref|XP_002467360.1| hypothetical protein SORBIDRAFT_01g026340 [Sorghum bicolor]
            gi|241921214|gb|EER94358.1| hypothetical protein
            SORBIDRAFT_01g026340 [Sorghum bicolor]
          Length = 401

 Score =  247 bits (630), Expect(2) = e-118
 Identities = 118/177 (66%), Positives = 143/177 (80%)
 Frame = -1

Query: 2397 SILNVGGLHQMLGLHDHVFVASPRDCVECLPESDSANKLGASFETPTGRRHISPAKYMEL 2218
            +I  +GGLH MLG+ DH+ VA+  D +  LP SD+ NK GASFETP+GRR + P+ YMEL
Sbjct: 80   TISAIGGLHGMLGVPDHILVAAASDSIASLPSSDATNKFGASFETPSGRRLVKPSDYMEL 139

Query: 2217 ISSQKPNLWASLADEVPAWVPEKRNKTSVDRTLRWLDDCLALDLASGSSMLGSIVGGTSK 2038
            IS  KPN+WASLADEVPAWV EKRNK SV+RTLRWLD C+ALD+ASG++  G IVGG+S 
Sbjct: 140  ISCMKPNIWASLADEVPAWVNEKRNKVSVERTLRWLDACIALDVASGTNSFGVIVGGSSL 199

Query: 2037 QERERCATEVSKRNVAGFWIGGFGLGESMEERPSLLNAVIDSLPEQKLRMISGFGLP 1867
            ++R+ CATEVSKRNV+GFWI GFGLGES+EER SLLNAV D LP +K R++S  GLP
Sbjct: 200  EQRKLCATEVSKRNVSGFWIAGFGLGESIEERCSLLNAVTDCLPPEKPRLVSRLGLP 256



 Score =  207 bits (528), Expect(2) = e-118
 Identities = 97/138 (70%), Positives = 112/138 (81%)
 Frame = -3

Query: 1813 QGVAAGIDLFDSTYVYHLTAGGFALVFPLDNMEKGAFDSQLSDIGSDGTKINLRATIYRK 1634
            +GVAAGIDLFDSTY+Y LT GGFAL+FP+D +E+   +  L+  G D TKINLRAT YRK
Sbjct: 261  EGVAAGIDLFDSTYIYQLTMGGFALIFPVDMVEREMQNGILNTSGGDSTKINLRATTYRK 320

Query: 1633 DTSAIVSNCQCFTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLEFFRSIREAIKCNS 1454
            D S +V +C CFTCQNHTRAY+NHLLNVHEMLAQILLEIHNTHHYL FFRSIREAIK   
Sbjct: 321  DMSRLVDSCNCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHHYLRFFRSIREAIKVGE 380

Query: 1453 FDVFHRRFIKGRRAHLTS 1400
            FD+F + F+K RRAH  +
Sbjct: 381  FDLFRQEFVKKRRAHFAA 398


>gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| TPA: hypothetical
            protein ZEAMMB73_649296 [Zea mays]
          Length = 398

 Score =  242 bits (617), Expect(2) = e-116
 Identities = 115/177 (64%), Positives = 140/177 (79%)
 Frame = -1

Query: 2397 SILNVGGLHQMLGLHDHVFVASPRDCVECLPESDSANKLGASFETPTGRRHISPAKYMEL 2218
            +I  + GLH MLGL DH+ VA+  D +E LP  ++ NK GASFETP+GRR + P+ YMEL
Sbjct: 77   TISAIRGLHGMLGLPDHILVAAASDSIESLPSCEATNKFGASFETPSGRRLVKPSDYMEL 136

Query: 2217 ISSQKPNLWASLADEVPAWVPEKRNKTSVDRTLRWLDDCLALDLASGSSMLGSIVGGTSK 2038
            IS  KPN+WASLADEVPAWV EKRNK SVDRTLRWLD C+ALD+ASG++  G IVGG+S 
Sbjct: 137  ISCMKPNIWASLADEVPAWVTEKRNKVSVDRTLRWLDACIALDVASGTNSFGVIVGGSSL 196

Query: 2037 QERERCATEVSKRNVAGFWIGGFGLGESMEERPSLLNAVIDSLPEQKLRMISGFGLP 1867
            ++R+ CATEVSKRNV+GFWI GFG GES+EER +LLNA  D LP +K R++S  GLP
Sbjct: 197  EQRKLCATEVSKRNVSGFWIAGFGFGESIEERCTLLNATTDCLPREKPRLVSRLGLP 253



 Score =  206 bits (523), Expect(2) = e-116
 Identities = 95/140 (67%), Positives = 111/140 (79%)
 Frame = -3

Query: 1813 QGVAAGIDLFDSTYVYHLTAGGFALVFPLDNMEKGAFDSQLSDIGSDGTKINLRATIYRK 1634
            +GVAAGIDLFDSTY+Y LT GGFAL+FP+D +E+   +  L+    D TKINLRAT YRK
Sbjct: 258  EGVAAGIDLFDSTYIYQLTMGGFALIFPVDMVEREMQNGVLNTTDGDSTKINLRATTYRK 317

Query: 1633 DTSAIVSNCQCFTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYLEFFRSIREAIKCNS 1454
            DTS +V +C CFTCQNHTRAY+NHLLNVHEMLAQILLEIHNTHHYL FF SIREAIK   
Sbjct: 318  DTSRLVDSCNCFTCQNHTRAYLNHLLNVHEMLAQILLEIHNTHHYLRFFHSIREAIKVGE 377

Query: 1453 FDVFHRRFIKGRRAHLTSAI 1394
            FD+F + F+K RR H  + +
Sbjct: 378  FDLFRQEFVKKRRTHFAAVV 397


Top