BLASTX nr result

ID: Dioscorea21_contig00001591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001591
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852...   156   2e-35
emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]   156   2e-35
ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II tra...   146   1e-32
ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807...   144   5e-32

>ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852787 [Vitis vinifera]
          Length = 145

 Score =  156 bits (394), Expect = 2e-35
 Identities = 89/146 (60%), Positives = 101/146 (69%), Gaps = 3/146 (2%)
 Frame = -2

Query: 1514 MDSIVDALSSAYNXXXXXXXXXXXXXEQSGGRKSPKTDAALEAFRQRWELFRVACDQAEE 1335
            MD+IVDAL++AY              E SG +K+  TDAALE F+QRWELFRVACDQAEE
Sbjct: 1    MDNIVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 1334 LVESMKQRIGSECLVDEATGANPRCGPG---SSGIPPISAVRLEQMSKAVRWIVIELQXX 1164
             VES+KQRIGSECLVDEATG +    PG   ++G+PPISAVRLEQMSKAVRW+VIELQ  
Sbjct: 61   FVESVKQRIGSECLVDEATG-SVAGKPGQAVTAGLPPISAVRLEQMSKAVRWLVIELQHG 119

Query: 1163 XXXXXXXXXXXXXAPFDARFPEDGAQ 1086
                         APFDARF ED AQ
Sbjct: 120  SGTAGGPSHSHVSAPFDARFSEDAAQ 145


>emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]
          Length = 145

 Score =  156 bits (394), Expect = 2e-35
 Identities = 89/146 (60%), Positives = 101/146 (69%), Gaps = 3/146 (2%)
 Frame = -2

Query: 1514 MDSIVDALSSAYNXXXXXXXXXXXXXEQSGGRKSPKTDAALEAFRQRWELFRVACDQAEE 1335
            MD+IVDAL++AY              E SG +K+  TDAALE F+QRWELFRVACDQAEE
Sbjct: 1    MDNIVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 1334 LVESMKQRIGSECLVDEATGANPRCGPG---SSGIPPISAVRLEQMSKAVRWIVIELQXX 1164
             VES+KQRIGSECLVDEATG +    PG   ++G+PPISAVRLEQMSKAVRW+VIELQ  
Sbjct: 61   FVESVKQRIGSECLVDEATG-SVAGKPGQAVTTGLPPISAVRLEQMSKAVRWLVIELQHG 119

Query: 1163 XXXXXXXXXXXXXAPFDARFPEDGAQ 1086
                         APFDARF ED AQ
Sbjct: 120  SGTAGGPSHSHVSAPFDARFSEDAAQ 145


>ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|222848384|gb|EEE85931.1|
            predicted protein [Populus trichocarpa]
          Length = 146

 Score =  152 bits (385), Expect = 2e-34
 Identities = 87/146 (59%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
 Frame = -2

Query: 1514 MDSIVDALSSAYNXXXXXXXXXXXXXEQSGGRKSPKTDAALEAFRQRWELFRVACDQAEE 1335
            MDSIVD+L++AY              E SGG+K+  TD ALE F+Q+WELFRV+CDQAEE
Sbjct: 1    MDSIVDSLNNAYQDFVGAAANVLEAKELSGGQKTAATDVALENFKQKWELFRVSCDQAEE 60

Query: 1334 LVESMKQRIGSECLVDEATGA-NPRCGPGS-SGIPPISAVRLEQMSKAVRWIVIELQ-XX 1164
             VES+KQR+GSECLVDEATG+ + R G G  +G+PPISAVRLEQMSKAVRW+VIELQ   
Sbjct: 61   FVESVKQRVGSECLVDEATGSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 1163 XXXXXXXXXXXXXAPFDARFPEDGAQ 1086
                         APFDARF ED AQ
Sbjct: 121  GAAGGAAGHAHPSAPFDARFSEDAAQ 146


>ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            32-like [Cucumis sativus]
            gi|449515353|ref|XP_004164714.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 32-like [Cucumis
            sativus]
          Length = 146

 Score =  146 bits (369), Expect = 1e-32
 Identities = 84/146 (57%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
 Frame = -2

Query: 1514 MDSIVDALSSAYNXXXXXXXXXXXXXEQSGGRKSPKTDAALEAFRQRWELFRVACDQAEE 1335
            MDS+VD+L++AY              E SG +K+  TDAALE F+Q+WELFRVACDQAEE
Sbjct: 1    MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 1334 LVESMKQRIGSECLVDEATG--ANPRCGPGSSGIPPISAVRLEQMSKAVRWIVIELQ-XX 1164
             VES+KQRIGSECLVDEATG  A       ++ +PPISAVRLEQMSKAVRW+VIELQ   
Sbjct: 61   FVESVKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 1163 XXXXXXXXXXXXXAPFDARFPEDGAQ 1086
                         APFDARF ED  Q
Sbjct: 121  GAAASASAHSHQSAPFDARFTEDATQ 146


>ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807018 isoform 1 [Glycine
            max] gi|356508222|ref|XP_003522858.1| PREDICTED:
            uncharacterized protein LOC100807018 isoform 2 [Glycine
            max] gi|356508224|ref|XP_003522859.1| PREDICTED:
            uncharacterized protein LOC100807018 isoform 3 [Glycine
            max]
          Length = 146

 Score =  144 bits (364), Expect = 5e-32
 Identities = 87/148 (58%), Positives = 98/148 (66%), Gaps = 5/148 (3%)
 Frame = -2

Query: 1514 MDSIVDALSSAYNXXXXXXXXXXXXXEQSGGRKSPKTDAALEAFRQRWELFRVACDQAEE 1335
            MDSIVD+L++AY              E +G  K+  TD ALE F+Q+WELFRVACDQAEE
Sbjct: 1    MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 1334 LVESMKQRIGSECLVDEATGANPRCG-PGS---SGIPPISAVRLEQMSKAVRWIVIELQ- 1170
             VES+KQRIGSECLVDEAT   P  G PG    +G+PPISAVRLEQMSKAVRW+VIELQ 
Sbjct: 61   FVESVKQRIGSECLVDEAT--RPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQH 118

Query: 1169 XXXXXXXXXXXXXXXAPFDARFPEDGAQ 1086
                           APFDARF ED AQ
Sbjct: 119  GSGAGSANSALTHPSAPFDARFSEDAAQ 146


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