BLASTX nr result

ID: Dioscorea21_contig00001589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001589
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   163   6e-38
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   160   3e-37
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]   160   3e-37
ref|XP_002445683.1| hypothetical protein SORBIDRAFT_07g024200 [S...   159   6e-37
gb|ACN33388.1| unknown [Zea mays]                                     159   6e-37

>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  163 bits (412), Expect = 6e-38
 Identities = 81/103 (78%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   VGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 182
           VGDAK KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDAQHVEEA
Sbjct: 17  VGDAKEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEA 76

Query: 183 EKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAIIKQI 311
           EKIGL+YMDVEG                 YHAFLASEA+IKQI
Sbjct: 77  EKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 119



 Score =  137 bits (345), Expect = 3e-30
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +2

Query: 440 KVNETKAMVKFQLKKVLCMGVAVGNCSMEDKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 619
           KVNETKAMVKFQLKKVLCMGVAVGNCSME+KQIFQNVQLSVNFLVSLLKKNWQNVRCLYL
Sbjct: 146 KVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 205

Query: 620 KSTMGKPVRVF 652
           KSTMGK  R+F
Sbjct: 206 KSTMGKSNRIF 216


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  160 bits (406), Expect = 3e-37
 Identities = 80/103 (77%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   VGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 182
           V ++K KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA
Sbjct: 17  VNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 76

Query: 183 EKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAIIKQI 311
           EKIGL+YMDVEG                 YHAFLASEA+IKQI
Sbjct: 77  EKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 119



 Score =  136 bits (343), Expect = 6e-30
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +2

Query: 440 KVNETKAMVKFQLKKVLCMGVAVGNCSMEDKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 619
           KVNETKAMVKFQLKKVLCMGVAVGNCSME+KQIFQNVQLSVNFLVSLLKKNWQNVRCLYL
Sbjct: 146 KVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 205

Query: 620 KSTMGKPVRVF 652
           KSTMG+  RVF
Sbjct: 206 KSTMGRSNRVF 216


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score =  160 bits (406), Expect = 3e-37
 Identities = 80/103 (77%), Positives = 84/103 (81%)
 Frame = +3

Query: 3    VGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 182
            V ++K KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA
Sbjct: 802  VNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 861

Query: 183  EKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAIIKQI 311
            EKIGL+YMDVEG                 YHAFLASEA+IKQI
Sbjct: 862  EKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 904


>ref|XP_002445683.1| hypothetical protein SORBIDRAFT_07g024200 [Sorghum bicolor]
           gi|242081831|ref|XP_002445684.1| hypothetical protein
           SORBIDRAFT_07g024210 [Sorghum bicolor]
           gi|241942033|gb|EES15178.1| hypothetical protein
           SORBIDRAFT_07g024200 [Sorghum bicolor]
           gi|241942034|gb|EES15179.1| hypothetical protein
           SORBIDRAFT_07g024210 [Sorghum bicolor]
          Length = 216

 Score =  159 bits (403), Expect = 6e-37
 Identities = 80/103 (77%), Positives = 82/103 (79%)
 Frame = +3

Query: 3   VGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 182
           VGDAK K R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA
Sbjct: 17  VGDAKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 76

Query: 183 EKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAIIKQI 311
           EK+GLDYMDVE                  YHAFLASEAIIKQI
Sbjct: 77  EKMGLDYMDVESLKKMNKNKKLVKKLAKKYHAFLASEAIIKQI 119



 Score =  129 bits (325), Expect = 7e-28
 Identities = 63/71 (88%), Positives = 67/71 (94%)
 Frame = +2

Query: 440 KVNETKAMVKFQLKKVLCMGVAVGNCSMEDKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 619
           KVNETKA VKFQLKKVLCMGVAVGN SME+KQI QN+Q+SVNFLVSLLKKNWQNVRCLY+
Sbjct: 146 KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYV 205

Query: 620 KSTMGKPVRVF 652
           KSTMGKP RVF
Sbjct: 206 KSTMGKPYRVF 216


>gb|ACN33388.1| unknown [Zea mays]
          Length = 215

 Score =  159 bits (403), Expect = 6e-37
 Identities = 80/103 (77%), Positives = 82/103 (79%)
 Frame = +3

Query: 3   VGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 182
           VGDAK K R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA
Sbjct: 17  VGDAKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEA 76

Query: 183 EKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAIIKQI 311
           EK+GLDYMDVE                  YHAFLASEAIIKQI
Sbjct: 77  EKMGLDYMDVEALKKMNKNKKLVKRLAKKYHAFLASEAIIKQI 119



 Score =  123 bits (308), Expect = 7e-26
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = +2

Query: 440 KVNETKAMVKFQLKKVLCMGVAVGNCSMEDKQIFQNVQLSVNFLVSLLKKNWQNVRCLYL 619
           KVNETKA VKFQLKKVLCMGVAVGN +ME KQI QN+Q+SVNFLVSLLKKNWQNVRCLY+
Sbjct: 146 KVNETKATVKFQLKKVLCMGVAVGNLAME-KQIQQNIQMSVNFLVSLLKKNWQNVRCLYV 204

Query: 620 KSTMGKPVRVF 652
           KSTMGKP RVF
Sbjct: 205 KSTMGKPYRVF 215


Top