BLASTX nr result

ID: Dioscorea21_contig00001571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001571
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium]           65   9e-09
dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris]          64   1e-08
gb|AEW69809.1| Hop-interacting protein THI107 [Solanum lycopersi...    62   5e-08
dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum]             59   4e-07
dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila]      58   1e-06

>emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium]
          Length = 724

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
 Frame = -3

Query: 217 MPAMAC-VDAAV-PPLGYGFAWDGSLXXXXXXXXXXXXXXXXXXXXGLP--WSIDHSAAL 50
           MPA+ C VDAAV PPLGY F+WD SL                         WS D S+AL
Sbjct: 1   MPALGCCVDAAVSPPLGYAFSWDSSLPAPEFFSSGVPPSTNETAAHTAGSHWSPDLSSAL 60

Query: 49  YKIDGWGAPYFTVNAA 2
           Y++DGWGAPYF++N++
Sbjct: 61  YRVDGWGAPYFSINSS 76


>dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris]
          Length = 621

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/76 (48%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = -3

Query: 217 MPAMAC-VDAAV-PPLGYGFAWDGSLXXXXXXXXXXXXXXXXXXXXGLP--WSIDHSAAL 50
           MPA+ C VDAAV PP GY F WD SL                         WS  HS+AL
Sbjct: 1   MPALGCCVDAAVSPPPGYSFLWDSSLPAPEIFPSGVPPSTNTAVATTTTTHWSPAHSSAL 60

Query: 49  YKIDGWGAPYFTVNAA 2
           Y IDGWGAPYFTVN++
Sbjct: 61  YSIDGWGAPYFTVNSS 76


>gb|AEW69809.1| Hop-interacting protein THI107 [Solanum lycopersicum]
          Length = 721

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -3

Query: 217 MPAMAC-VDAAV-PPLGYGFAWDGSLXXXXXXXXXXXXXXXXXXXXG-LPWSIDHSAALY 47
           MPA+ C VDA+V PPLGY F+WD SL                        WS D S+ LY
Sbjct: 1   MPALGCCVDASVSPPLGYAFSWDSSLPAPELFSSGVPPATNAAAVSTGSHWSTDLSSDLY 60

Query: 46  KIDGWGAPYFTVNAA 2
           ++DGWGAPYF+VN++
Sbjct: 61  RVDGWGAPYFSVNSS 75


>dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum]
          Length = 733

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 36/76 (47%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = -3

Query: 217 MPAMAC-VDAAV-PPLGYGFAWDGSLXXXXXXXXXXXXXXXXXXXXGLP--WSIDHSAAL 50
           MPA+ C VDAAV PP GY F  D SL                         WS  HS+AL
Sbjct: 1   MPALGCCVDAAVSPPPGYSFLGDSSLPAPEIFPSGVPPSTNTAVATTTTTHWSPAHSSAL 60

Query: 49  YKIDGWGAPYFTVNAA 2
           Y IDGWGAPYFTVN++
Sbjct: 61  YSIDGWGAPYFTVNSS 76


>dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila]
          Length = 725

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -3

Query: 217 MPAMACVDAAVPPLGYGFAWDGSLXXXXXXXXXXXXXXXXXXXXGLP--WSIDHSAALYK 44
           MPA+ACVD A  P GY F+ D SL                         WS   SA+LY+
Sbjct: 1   MPALACVDTAFVPPGYAFSGDSSLPTAGDVFMPASPNSAAASVVDSSCRWSSSLSASLYR 60

Query: 43  IDGWGAPYFTVNAA 2
           IDGWGAPYF  N++
Sbjct: 61  IDGWGAPYFVANSS 74


Top