BLASTX nr result

ID: Dioscorea21_contig00001563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001563
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71261.1| 60S ribosomal protein L31B [Hevea brasiliensis]        171   6e-41
gb|ABD73300.1| ribosomal protein L31 [Panax ginseng]                  171   6e-41
gb|AAP72960.1| putative ribosomal protein L31 [Lactuca sativa]        170   1e-40
gb|ADR71260.1| 60S ribosomal protein L31A [Hevea brasiliensis]        169   2e-40
ref|XP_003633550.1| PREDICTED: 60S ribosomal protein L31-like [V...   169   2e-40

>gb|ADR71261.1| 60S ribosomal protein L31B [Hevea brasiliensis]
          Length = 120

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/120 (71%), Positives = 96/120 (80%)
 Frame = -3

Query: 399 MVDKARKGRKDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 220
           MVDK +  +++VVTREYTINLHKRLHGCTFKK APNAIKEI+KFAQKAMGT DVRVDVKL
Sbjct: 1   MVDKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 219 NKQIWSXXXXXXXXXXXXXXXXXRNDEEDAKEELFSLVTVAEVPTEGLKGLGTKVIEDDD 40
           NK IWS                 RND+EDAKEEL+SLVTVAE P+EGLKGLGTK+IED+D
Sbjct: 61  NKHIWSRGIRSVPRRVRVRIARRRNDDEDAKEELYSLVTVAETPSEGLKGLGTKIIEDED 120


>gb|ABD73300.1| ribosomal protein L31 [Panax ginseng]
          Length = 121

 Score =  171 bits (433), Expect = 6e-41
 Identities = 90/122 (73%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
 Frame = -3

Query: 399 MVDKARKGRKD-VVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVK 223
           MVDKA KGRK+ VVTREYTINLH+RLHGCTFKK APNAIKEI+KFAQKAMGTTDVRVD K
Sbjct: 1   MVDKASKGRKEEVVTREYTINLHRRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDAK 60

Query: 222 LNKQIWSXXXXXXXXXXXXXXXXXRNDEEDAKEELFSLVTVAEVPTEGLKGLGTKVIEDD 43
           LNKQIWS                 RNDEEDAKEEL+SLVTVA+ P EGLKGLGTK+I+D+
Sbjct: 61  LNKQIWSRGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVADTP-EGLKGLGTKIIDDE 119

Query: 42  DE 37
           +E
Sbjct: 120 EE 121


>gb|AAP72960.1| putative ribosomal protein L31 [Lactuca sativa]
          Length = 120

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/120 (70%), Positives = 96/120 (80%)
 Frame = -3

Query: 399 MVDKARKGRKDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 220
           MVDK +  +++VVTREYTINLHKRLHGCTFKK AP AIKEI+KFAQKAMGTTDVRVDVKL
Sbjct: 1   MVDKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKL 60

Query: 219 NKQIWSXXXXXXXXXXXXXXXXXRNDEEDAKEELFSLVTVAEVPTEGLKGLGTKVIEDDD 40
           NK +WS                 RND+EDAKEEL+SLVTVAE+P EGLKGLGTKVI+D+D
Sbjct: 61  NKYVWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDED 120


>gb|ADR71260.1| 60S ribosomal protein L31A [Hevea brasiliensis]
          Length = 121

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/121 (72%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
 Frame = -3

Query: 399 MVDKARKGRKD-VVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVK 223
           MV+KA KGRK+ VVTREYTINLHKRLHGCTFKK AP AIKEI+KFAQKAMGTTDVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 222 LNKQIWSXXXXXXXXXXXXXXXXXRNDEEDAKEELFSLVTVAEVPTEGLKGLGTKVIEDD 43
           LNK IWS                 RNDEEDAKEE +SLVTV EVP+EG KGLGTKVI+++
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

Query: 42  D 40
           D
Sbjct: 121 D 121


>ref|XP_003633550.1| PREDICTED: 60S ribosomal protein L31-like [Vitis vinifera]
           gi|297736224|emb|CBI24862.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  169 bits (428), Expect = 2e-40
 Identities = 88/121 (72%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
 Frame = -3

Query: 399 MVDKARKGRKD-VVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVK 223
           MV+K+ K RK+ +VTREYTINLHKRLHGCTFKK AP AIKEI+KFAQKAMGTTDVRVDVK
Sbjct: 1   MVEKSNKARKEEIVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 222 LNKQIWSXXXXXXXXXXXXXXXXXRNDEEDAKEELFSLVTVAEVPTEGLKGLGTKVIEDD 43
           LNK IWS                 RNDEEDAKEELFSLVTVAEVP EGLKGL TK+I+D+
Sbjct: 61  LNKHIWSRGIRSVPRRIRVRIARKRNDEEDAKEELFSLVTVAEVPPEGLKGLETKIIDDE 120

Query: 42  D 40
           D
Sbjct: 121 D 121


Top