BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001542
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40787.1| unknown [Picea sitchensis]                             431   e-118
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   429   e-117
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   426   e-117
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   422   e-115
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   414   e-113

>gb|ACN40787.1| unknown [Picea sitchensis]
          Length = 397

 Score =  431 bits (1109), Expect = e-118
 Identities = 215/329 (65%), Positives = 238/329 (72%), Gaps = 12/329 (3%)
 Frame = -2

Query: 1327 VRETAAEQLEERQSDWAYSKPVVFLDILWNMAFVGVAVGVLILSRDENPLMPLRLWIGGY 1148
            VRETAAEQLEERQSDWAYS+PVV LDI+WN+AFV VA  VL+LSR ENP MP+R+W+ GY
Sbjct: 70   VRETAAEQLEERQSDWAYSRPVVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGY 129

Query: 1147 ALQCMLHMVCVVIEYRRRHPSFLXXXXXXXXXXXXXXXXXXXXXXXXSYGDEQSEDE--- 977
            ALQC+LHM+CV  EYRRRH S                          S G++Q  D+   
Sbjct: 130  ALQCLLHMICVCFEYRRRH-SNAQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATD 188

Query: 976  ---------DRTSVAKHLESANTMFSFIWWIIGFYWVSAGGQELTRDAPQLYWLCIXXXX 824
                     +RTS+AK LESANTMFSFIWWI+GFYW+SAGGQ LT DAPQLYWLC+    
Sbjct: 189  EEVDEVLSTERTSIAKRLESANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLA 248

Query: 823  XXXXXXXXXXXXXXVIGIAVCCCLPCIIAILYAVADQEGASDEDIRQLPKYKFRRIGSSE 644
                          VIGIAVCCCLPCIIAILYAVADQEGAS+EDI  LPKYKF+ IG SE
Sbjct: 249  FDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDIGLLPKYKFKSIGGSE 308

Query: 643  KLGAETSGPFGGIMTESGSDSTNEHALSAEDAECCICLSTYDDGVELRELPCRHHFHCAC 464
            K+  E SGPFGGIM     +S+ E  LSAEDAECCICLSTYDDGVELRELPC HHFHC C
Sbjct: 309  KISGEKSGPFGGIMNLCTGESSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTC 368

Query: 463  IDKWLYINATCPLCKYNIIKSSNHGREEV 377
            IDKWL INATCPLCKYNIIKSSN+ REEV
Sbjct: 369  IDKWLRINATCPLCKYNIIKSSNNAREEV 397


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  429 bits (1102), Expect = e-117
 Identities = 215/320 (67%), Positives = 234/320 (73%), Gaps = 3/320 (0%)
 Frame = -2

Query: 1327 VRETAAEQLEERQSDWAYSKPVVFLDILWNMAFVGVAVGVLILSRDENPLMPLRLWIGGY 1148
            VRETAAEQLEERQSDWAYSKPVV LDILWN AFV VA+GVLI+SR E+P MPLRLWI GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGY 125

Query: 1147 ALQCMLHMVCVVIEYRRRHPSFLXXXXXXXXXXXXXXXXXXXXXXXXSYGDEQSEDEDRT 968
             LQC+LHMVCV +EYRRR                             +    Q ED D T
Sbjct: 126  GLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLA--QLEDHDGT 183

Query: 967  S-VAKHLESANTMFSFIWWIIGFYWVSAGGQELTRDAPQLYWLCIXXXXXXXXXXXXXXX 791
            S VAKHLESANTMFSFIWWIIGFYWVSAGGQ L+ ++PQLYWLCI               
Sbjct: 184  SSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVA 243

Query: 790  XXXVIGIAVCCCLPCIIAILYAVADQEGASDEDIRQLPKYKFRRIGSSEKL--GAETSGP 617
               +IGIAVCCCLPCIIAILYAVADQEGAS EDI QL K+KFRR+ + EKL    +  GP
Sbjct: 244  LACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGNGDEQGP 303

Query: 616  FGGIMTESGSDSTNEHALSAEDAECCICLSTYDDGVELRELPCRHHFHCACIDKWLYINA 437
             GG+MTE G+DS  EH LS EDAECCICLS YDDGVELRELPC HHFHCAC+DKWLYINA
Sbjct: 304  LGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINA 363

Query: 436  TCPLCKYNIIKSSNHGREEV 377
            TCPLCKYNI+KSS+  REEV
Sbjct: 364  TCPLCKYNILKSSSRDREEV 383


>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 383

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/318 (66%), Positives = 231/318 (72%), Gaps = 1/318 (0%)
 Frame = -2

Query: 1327 VRETAAEQLEERQSDWAYSKPVVFLDILWNMAFVGVAVGVLILSRDENPLMPLRLWIGGY 1148
            VRETAAEQLEERQSDWAYSKPVV LD++WN AFV VA  VL+LSR E+P MPLR WI GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFWIVGY 125

Query: 1147 ALQCMLHMVCVVIEYRRRHPSFLXXXXXXXXXXXXXXXXXXXXXXXXSYGDEQS-EDEDR 971
            ALQC+LH+VCV +EYRRR                              Y    S  DE  
Sbjct: 126  ALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVTLASLGDESS 185

Query: 970  TSVAKHLESANTMFSFIWWIIGFYWVSAGGQELTRDAPQLYWLCIXXXXXXXXXXXXXXX 791
            TSVAKHLESANTMFSFIWWIIGFYWVSAGGQ L RD+PQLYWLCI               
Sbjct: 186  TSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVA 245

Query: 790  XXXVIGIAVCCCLPCIIAILYAVADQEGASDEDIRQLPKYKFRRIGSSEKLGAETSGPFG 611
               VIGIAVCCCLPCIIAILYAVADQEGAS EDI QL ++KFR++G  EK+  +  G  G
Sbjct: 246  LACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACG 305

Query: 610  GIMTESGSDSTNEHALSAEDAECCICLSTYDDGVELRELPCRHHFHCACIDKWLYINATC 431
            GIMTE G+D+  EH LS EDAECCICLS YDDGVELRELPC HHFHC C+DKWLYINATC
Sbjct: 306  GIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATC 365

Query: 430  PLCKYNIIKSSNHGREEV 377
            PLCKYNI+KSS++GREEV
Sbjct: 366  PLCKYNILKSSSNGREEV 383


>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 372

 Score =  422 bits (1085), Expect = e-115
 Identities = 206/317 (64%), Positives = 228/317 (71%)
 Frame = -2

Query: 1327 VRETAAEQLEERQSDWAYSKPVVFLDILWNMAFVGVAVGVLILSRDENPLMPLRLWIGGY 1148
            VRETAAEQLEERQSDWAYSKPVV LD++WN AFV VA  VL+LSR E+P MPLR WI GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFWIVGY 125

Query: 1147 ALQCMLHMVCVVIEYRRRHPSFLXXXXXXXXXXXXXXXXXXXXXXXXSYGDEQSEDEDRT 968
            ALQC+LH+VCV +EYRRR                                  Q +     
Sbjct: 126  ALQCILHIVCVSVEYRRRR----------RRAGVFGSEDDGIGSGGSYSSSPQGDSSQYV 175

Query: 967  SVAKHLESANTMFSFIWWIIGFYWVSAGGQELTRDAPQLYWLCIXXXXXXXXXXXXXXXX 788
            +VAKHLESANTMFSFIWWIIGFYWVSAGGQ L RD+PQLYWLCI                
Sbjct: 176  TVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVAL 235

Query: 787  XXVIGIAVCCCLPCIIAILYAVADQEGASDEDIRQLPKYKFRRIGSSEKLGAETSGPFGG 608
              VIGIAVCCCLPCIIAILYAVADQEGAS EDI QL ++KFR++G  EK+  +  G  GG
Sbjct: 236  ACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGG 295

Query: 607  IMTESGSDSTNEHALSAEDAECCICLSTYDDGVELRELPCRHHFHCACIDKWLYINATCP 428
            IMTE G+D+  EH LS EDAECCICLS YDDGVELRELPC HHFHC C+DKWLYINATCP
Sbjct: 296  IMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCP 355

Query: 427  LCKYNIIKSSNHGREEV 377
            LCKYNI+KSS++GREEV
Sbjct: 356  LCKYNILKSSSNGREEV 372


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 382

 Score =  414 bits (1063), Expect = e-113
 Identities = 202/315 (64%), Positives = 227/315 (72%), Gaps = 4/315 (1%)
 Frame = -2

Query: 1327 VRETAAEQLEERQSDWAYSKPVVFLDILWNMAFVGVAVGVLILSRDENPLMPLRLWIGGY 1148
            VRETAAEQLEERQSDWAYSKP+V LDI+WN+AFV VA+ VL++SRDE P  PLRLWI GY
Sbjct: 61   VRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGY 120

Query: 1147 ALQCMLHMVCVVIEYRRRH----PSFLXXXXXXXXXXXXXXXXXXXXXXXXSYGDEQSED 980
             LQC+LHMVCV +EY+RR        L                           + ++ D
Sbjct: 121  GLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRD 180

Query: 979  EDRTSVAKHLESANTMFSFIWWIIGFYWVSAGGQELTRDAPQLYWLCIXXXXXXXXXXXX 800
            ED TSVAKHLESANTMFSFIWWIIGFYWVSAGGQ+LTRD+PQLYWLCI            
Sbjct: 181  EDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVI 240

Query: 799  XXXXXXVIGIAVCCCLPCIIAILYAVADQEGASDEDIRQLPKYKFRRIGSSEKLGAETSG 620
                  VIGIAVCCCLPCIIAILY VADQEGA+ E+I +LPKYKFRRIG SEKL  E   
Sbjct: 241  CVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQE 300

Query: 619  PFGGIMTESGSDSTNEHALSAEDAECCICLSTYDDGVELRELPCRHHFHCACIDKWLYIN 440
             FGGIMTE  +D+  EH +  EDAECCICLS Y+D  ELRELPCRH FHC CIDKWLYIN
Sbjct: 301  SFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYIN 360

Query: 439  ATCPLCKYNIIKSSN 395
            ATCPLCK NI+K+++
Sbjct: 361  ATCPLCKLNILKNAS 375