BLASTX nr result

ID: Dioscorea21_contig00001541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001541
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20236.3| unnamed protein product [Vitis vinifera]              338   2e-90
dbj|BAD37623.1| unknown protein [Oryza sativa Japonica Group] gi...   338   3e-90
ref|XP_002300405.1| predicted protein [Populus trichocarpa] gi|2...   320   6e-85
ref|NP_001146021.1| putative homeodomain-like transcription fact...   319   1e-84
ref|NP_001141052.1| uncharacterized protein LOC100273133 [Zea ma...   315   2e-83

>emb|CBI20236.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  338 bits (868), Expect = 2e-90
 Identities = 180/314 (57%), Positives = 206/314 (65%), Gaps = 3/314 (0%)
 Frame = +3

Query: 6   GGPVFRFIQSEVVEMEKCLQEANNLLPPREIICALAEKFSSSADRAGKIVVQPKQVWNWF 185
           GGP FRF  +EV EME  LQE NN +P REI+ AL+EKFS+S DRAG+IVVQ KQVWNWF
Sbjct: 8   GGPAFRFTPNEVAEMENILQEHNNSMPAREILVALSEKFSASTDRAGRIVVQVKQVWNWF 67

Query: 186 QNRRYARRARSSKGPEKLIVSTMPRDDSLTFKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 365
           QNRRYA RA+S+K P KL VS++P+DD    KN                           
Sbjct: 68  QNRRYAIRAKSTKAPGKLSVSSLPKDDLTQVKNVPQDEAYFKCPLVLAIILQICTDLILV 127

Query: 366 XXXXXXXS---DSFQVEFEAKSARDGAWYDVSAFISHRTIEAGDPEVRVRFAGFGAEEDE 536
                  S   DS Q+EFEAKSARDGAWYDV+AF+SHR ++  DP+V VRFAGFG EEDE
Sbjct: 128 PVPNAGKSAPSDSSQMEFEAKSARDGAWYDVAAFLSHRYLDTSDPDVLVRFAGFGPEEDE 187

Query: 537 WVDVVKCVRLRSLPCEASECAVVIPGDLILCFQEGKEQALYFDAHVLDAQXXXXXXXXXX 716
           WV+V + VR RSLPCE+SEC VVIPGDLILCFQEGKEQALY+DAHVLDAQ          
Sbjct: 188 WVNVKRNVRQRSLPCESSECVVVIPGDLILCFQEGKEQALYYDAHVLDAQRRRHDVRGCR 247

Query: 717 XXFLVRYDHDQSEEIVPLRKVCRRPETDYRLKMLQASRAAALESSVVSSDPTLPGSSKEV 896
             FLVRYDHDQSEEIVPLRKVCRRPETDYRL+ L AS     ES  V      P     +
Sbjct: 248 CRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHASN----ESGSVDQQKPEPSYGGSI 303

Query: 897 ILAAEKPPKQWKSM 938
                 PP+  + +
Sbjct: 304 SRIFPTPPEMMQKL 317


>dbj|BAD37623.1| unknown protein [Oryza sativa Japonica Group]
           gi|215737438|dbj|BAG96568.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 370

 Score =  338 bits (866), Expect = 3e-90
 Identities = 179/312 (57%), Positives = 209/312 (66%)
 Frame = +3

Query: 6   GGPVFRFIQSEVVEMEKCLQEANNLLPPREIICALAEKFSSSADRAGKIVVQPKQVWNWF 185
           GGP FRF Q+EV EME  LQ+ NN +P R +I ALA+KF+SS  R+GK+ VQPKQVWNWF
Sbjct: 8   GGPAFRFTQAEVAEMEARLQQLNNAIPHRSVIQALADKFTSSPARSGKVAVQPKQVWNWF 67

Query: 186 QNRRYARRARSSKGPEKLIVSTMPRDDSLTFKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 365
           QNRRY+ R+RSS+GP  L+ + M    S   K+                           
Sbjct: 68  QNRRYSHRSRSSRGPPTLMQTKMLPTGSDEHKSPPFRAMPSASAHSGSPSGKGSL----- 122

Query: 366 XXXXXXXSDSFQVEFEAKSARDGAWYDVSAFISHRTIEAGDPEVRVRFAGFGAEEDEWVD 545
                   +S QVEFEAKSARDGAWYDV+AF+SHR  E+GDPEVRVRF+GFGAEEDEW++
Sbjct: 123 --------ESGQVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWIN 174

Query: 546 VVKCVRLRSLPCEASECAVVIPGDLILCFQEGKEQALYFDAHVLDAQXXXXXXXXXXXXF 725
           V KCVR RSLPCE++EC  V+PGDLILCFQEGKEQALYFDA VLDAQ            F
Sbjct: 175 VRKCVRQRSLPCESTECVAVLPGDLILCFQEGKEQALYFDACVLDAQRRRHDVRGCRCRF 234

Query: 726 LVRYDHDQSEEIVPLRKVCRRPETDYRLKMLQASRAAALESSVVSSDPTLPGSSKEVILA 905
           LVRYDHD SEEIVPLRKVCRRPETDYRL++L A+RAA +    V        S  +   A
Sbjct: 235 LVRYDHDHSEEIVPLRKVCRRPETDYRLQILHAARAAGMAKEAVVD----LVSHNDKSSA 290

Query: 906 AEKPPKQWKSMD 941
            +KPPKQ K MD
Sbjct: 291 EQKPPKQHKMMD 302


>ref|XP_002300405.1| predicted protein [Populus trichocarpa] gi|222847663|gb|EEE85210.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  320 bits (820), Expect = 6e-85
 Identities = 163/278 (58%), Positives = 192/278 (69%)
 Frame = +3

Query: 6   GGPVFRFIQSEVVEMEKCLQEANNLLPPREIICALAEKFSSSADRAGKIVVQPKQVWNWF 185
           GGP FRF+Q EV EM+  LQE +N++P RE++ +LAEKFS S++R GKI VQ KQVWNWF
Sbjct: 8   GGPSFRFMQYEVTEMDAILQEHHNMMPAREVLVSLAEKFSESSERKGKIQVQMKQVWNWF 67

Query: 186 QNRRYARRARSSKGPEKLIVSTMPRDDSLTFKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 365
           QNRRYA RA+S+K P KL ++ MPRDDS   ++                           
Sbjct: 68  QNRRYAIRAKSNKAPMKLNITPMPRDDSAAARSVPQQAAAPIPDAVPATTSASSAAGARR 127

Query: 366 XXXXXXXSDSFQVEFEAKSARDGAWYDVSAFISHRTIEAGDPEVRVRFAGFGAEEDEWVD 545
                  S++  +EFEAKS RDGAWYDV  F SHR ++ GDPEV VRFAGFG +EDEW++
Sbjct: 128 AT-----SENSYMEFEAKSGRDGAWYDVGTFQSHRYLDKGDPEVLVRFAGFGPDEDEWLN 182

Query: 546 VVKCVRLRSLPCEASECAVVIPGDLILCFQEGKEQALYFDAHVLDAQXXXXXXXXXXXXF 725
           V K VR RSLPCEASEC  V+PGDLILCFQEGK+QALYFDAHVLDAQ            F
Sbjct: 183 VCKHVRQRSLPCEASECVAVLPGDLILCFQEGKDQALYFDAHVLDAQRRRHDVRGCRCRF 242

Query: 726 LVRYDHDQSEEIVPLRKVCRRPETDYRLKMLQASRAAA 839
           LVRYDHDQSEEIVPLRK+CRRPETDYRL  L A+  +A
Sbjct: 243 LVRYDHDQSEEIVPLRKICRRPETDYRLLQLHAANDSA 280


>ref|NP_001146021.1| putative homeodomain-like transcription factor superfamily protein
           [Zea mays] gi|219885347|gb|ACL53048.1| unknown [Zea
           mays] gi|414589321|tpg|DAA39892.1| TPA: putative
           homeodomain-like transcription factor superfamily
           protein [Zea mays]
          Length = 380

 Score =  319 bits (818), Expect = 1e-84
 Identities = 170/318 (53%), Positives = 206/318 (64%), Gaps = 6/318 (1%)
 Frame = +3

Query: 6   GGPVFRFIQSEVVEMEKCLQEANNLLPPREIICALAEKFSSSADRAGKIVVQPKQVWNWF 185
           G P FRF+ SEV EME  L + NN +P R ++  LA+KFS+S +RAGK+ +QPKQVWNWF
Sbjct: 8   GAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQPKQVWNWF 67

Query: 186 QNRRYARRARS----SKGPEKLIVSTMPRDDSLTFKNXXXXXXXXXXXXXXXXXXXXXXX 353
           QNRRY+ RA++    S  P K+  S           +                       
Sbjct: 68  QNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHGSSSTGKN 127

Query: 354 XXXXXXXXXXXSDSFQVEFEAKSARDGAWYDVSAFISHRTIEAGDPEVRVRFAGFGAEED 533
                       +S  VEFEAKSARDGAWYDV+AF+SHR  E+GDPEVRVRF+GFGAEED
Sbjct: 128 PV----------ESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEED 177

Query: 534 EWVDVVKCVRLRSLPCEASECAVVIPGDLILCFQEGKEQALYFDAHVLDAQXXXXXXXXX 713
           EW++V KCVR RSLPCEA+EC  V+PGDLILCFQEGK+QALY+DAHVLDAQ         
Sbjct: 178 EWINVRKCVRQRSLPCEATECVAVLPGDLILCFQEGKDQALYYDAHVLDAQRRRHDVRGC 237

Query: 714 XXXFLVRYDHDQSEEIVPLRKVCRRPETDYRLKMLQASRAAALESSVVS--SDPTLPGSS 887
              FLVRYDHD SEEIVPLRKVCRRPETDYRL++L A+RAAA  + V +   +  +  +S
Sbjct: 238 RCRFLVRYDHDSSEEIVPLRKVCRRPETDYRLQILHAARAAATNADVHTPPKEVKVELAS 297

Query: 888 KEVILAAEKPPKQWKSMD 941
            +   A +KP KQ K MD
Sbjct: 298 TDKSPAEQKPHKQHKMMD 315


>ref|NP_001141052.1| uncharacterized protein LOC100273133 [Zea mays]
           gi|194702404|gb|ACF85286.1| unknown [Zea mays]
           gi|238013980|gb|ACR38025.1| unknown [Zea mays]
           gi|414884976|tpg|DAA60990.1| TPA: putative
           homeodomain-like transcription factor superfamily
           protein [Zea mays]
          Length = 382

 Score =  315 bits (806), Expect = 2e-83
 Identities = 170/319 (53%), Positives = 202/319 (63%), Gaps = 7/319 (2%)
 Frame = +3

Query: 6   GGPVFRFIQSEVVEMEKCLQEANNLLPPREIICALAEKFSSSADRAGKIVVQPKQVWNWF 185
           G P FRF+ SEV EME  L + NN +P R ++  LA+KFS+S +RAGK+ +QPKQVWNWF
Sbjct: 9   GAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQPKQVWNWF 68

Query: 186 QNRRYARRARSSKGPEKLIVSTMPRDDSLTFKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 365
           QNRRY+ RA++++      V   P                                    
Sbjct: 69  QNRRYSHRAKTTR------VVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHHGS 122

Query: 366 XXXXXXXSDSFQVEFEAKSARDGAWYDVSAFISHRTIEAGDPEVRVRFAGFGAEEDEWVD 545
                   +   VEFEAKSARDGAWYDV+AF+SHR  E+GDPEVRVRF+GFGAEEDEW++
Sbjct: 123 SSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWIN 182

Query: 546 VVKCVRLRSLPCEASECAVVIPGDLILCFQEGKEQALYFDAHVLDAQXXXXXXXXXXXXF 725
           V KCVR RSLPCEA+EC  V+PGDLILCFQE KEQALYFDA VLDAQ            F
Sbjct: 183 VRKCVRQRSLPCEATECVAVLPGDLILCFQEDKEQALYFDARVLDAQRRRHDVRGCRCRF 242

Query: 726 LVRYDHDQSEEIVPLRKVCRRPETDYRLKMLQASRAAALESSVVSSDPTLPGSSKEVILA 905
           LVRYDHD SEEIVPLRKVCRRPETDYRL++L A+RAAA      S+D   P    +V LA
Sbjct: 243 LVRYDHDSSEEIVPLRKVCRRPETDYRLQILHAARAAA-----ASADIHTPPREAKVELA 297

Query: 906 A-------EKPPKQWKSMD 941
           +       +KP KQ+K MD
Sbjct: 298 SNAKSPYEQKPQKQYKMMD 316


Top