BLASTX nr result

ID: Dioscorea21_contig00001508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001508
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76860.1| unknown [Picea sitchensis]                             134   8e-30
ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|XP_002311904.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002269339.1| PREDICTED: uncharacterized protein LOC100252...   122   4e-26
ref|XP_002513324.1| conserved hypothetical protein [Ricinus comm...   118   4e-25

>gb|ADE76860.1| unknown [Picea sitchensis]
          Length = 166

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/146 (48%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
 Frame = -3

Query: 432 LSPMASIVTRALNLIQSPSGRLLTVR-RCSGRPKKEVVG--KLVEIDLEEESTATTKADV 262
           LS  A  ++   N  Q PS RLL  R R  G  +K+  G  +L+E+DL + +    +   
Sbjct: 7   LSQTALKMSNRGNYAQVPSSRLLNARFRSGGSSRKDSEGGSQLIEVDLGDSAAENGENSS 66

Query: 261 EILRVRRLEDAIHGIIVRRAAPDWLPFRPGSSYWVPPRPTSLGLVELVEKLA-NPMSEEE 85
           E+  ++RLEDAIHGI+VRRAAPDWLPF PG+SYWVPPR  +  LVEL+ +L+ N M++EE
Sbjct: 67  EVFGIQRLEDAIHGILVRRAAPDWLPFLPGASYWVPPRKNNGSLVELLGRLSNNSMTQEE 126

Query: 84  RLSFSSVRGWPSLDYFVQGDPPRHVK 7
            LSF++ RGWPS  YF++G  P  V+
Sbjct: 127 SLSFTTSRGWPSSAYFIEGGSPHQVE 152


>ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|222865476|gb|EEF02607.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  128 bits (321), Expect = 6e-28
 Identities = 73/136 (53%), Positives = 91/136 (66%), Gaps = 8/136 (5%)
 Frame = -3

Query: 411 VTRALNLIQSPS-----GRLLTVRRCSGRPKKEVVGKLVEIDLEEESTATTKADVEILRV 247
           VT+   L  SPS      RLLT+R  S  P +    +       ++S++++  D  +   
Sbjct: 9   VTKTYYLTSSPSPTRCSSRLLTLRAQSNVPNRNNQSE------SDDSSSSSSTDPLL--- 59

Query: 246 RRLEDAIHGIIVRRAAPDWLPFRPGSSYWVPPRPT---SLGLVELVEKLANPMSEEERLS 76
           R+LEDAIHGIIVRRAAPDWLPF PGSSYWVPP  +   SLG+  LVEKLANP+S+EE LS
Sbjct: 60  RKLEDAIHGIIVRRAAPDWLPFLPGSSYWVPPPRSASGSLGIAHLVEKLANPLSDEESLS 119

Query: 75  FSSVRGWPSLDYFVQG 28
            S+VRGWPS DYFV+G
Sbjct: 120 TSTVRGWPSSDYFVKG 135


>ref|XP_002311904.1| predicted protein [Populus trichocarpa] gi|222851724|gb|EEE89271.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/122 (57%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
 Frame = -3

Query: 378 SGRLLTVRRCSGRPKKEVVGKLVEIDLEEESTATTKADVEILRVRRLEDAIHGIIVRRAA 199
           S RLLT+R  S  P           + ++ S+A++  D  +   R+LEDAIH IIVRRAA
Sbjct: 22  SSRLLTLRAQSNIPNSNSPS-----ETDDSSSASSSTDPLL---RKLEDAIHRIIVRRAA 73

Query: 198 PDWLPFRPGSSYWVP-PRPT--SLGLVELVEKLANPMSEEERLSFSSVRGWPSLDYFVQG 28
           PDWLPF PGSSYWVP PR T  SLG+  LVEKLANP+S+EE LS ++VRGWPS DYFV+G
Sbjct: 74  PDWLPFLPGSSYWVPSPRSTSGSLGIAHLVEKLANPLSDEESLSTTTVRGWPSSDYFVKG 133

Query: 27  DP 22
            P
Sbjct: 134 AP 135


>ref|XP_002269339.1| PREDICTED: uncharacterized protein LOC100252029 [Vitis vinifera]
          Length = 197

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/164 (45%), Positives = 99/164 (60%), Gaps = 14/164 (8%)
 Frame = -3

Query: 462 PLPRLAELSPLSP-----MASIVTRALNLIQ---SPSGR------LLTVRRCSGRPKKEV 325
           P+  L+ +S +S      MA ++ + L L +   SPS +      +LTVR  S R  K  
Sbjct: 6   PVQFLSAISAISAKSSLSMARVLFQTLTLTRLSLSPSCKPPPLISVLTVRHRSNRSGK-- 63

Query: 324 VGKLVEIDLEEESTATTKADVEILRVRRLEDAIHGIIVRRAAPDWLPFRPGSSYWVPPRP 145
             +L+EI+LE ES      DVE++ +RRLEDAIH II +R APDWLPF PGSSYWVPP  
Sbjct: 64  -AQLIEINLESES-----GDVEVMGIRRLEDAIHRIIAQRLAPDWLPFIPGSSYWVPPSR 117

Query: 144 TSLGLVELVEKLANPMSEEERLSFSSVRGWPSLDYFVQGDPPRH 13
               L++ + KLA  MS E+ L+ ++VRGWPS  YF+Q D   H
Sbjct: 118 RQFDLLKCMGKLAREMSVEDALAVTAVRGWPSPSYFIQDDASEH 161


>ref|XP_002513324.1| conserved hypothetical protein [Ricinus communis]
           gi|223547232|gb|EEF48727.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/125 (53%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
 Frame = -3

Query: 372 RLLTVRRCSGRPKKEVVGKLVEIDLEEESTATTKADVEILRVRRLEDAIHGIIVRRAAPD 193
           RLL  R  S  P           D+ EES+ T         +R+LEDAIH IIVRRAAPD
Sbjct: 22  RLLAFRAQSNTPNHLA-------DISEESSTTDPL------LRKLEDAIHRIIVRRAAPD 68

Query: 192 WLPFRPGSSYWV-PPRPT--SLGLVELVEKLANPMSEEERLSFSSVRGWPSLDYFVQGDP 22
           WLPF PGSSYWV PPR T  SLG+ +LVEKLANP+++E+ LS ++VRGWPS D+F Q   
Sbjct: 69  WLPFLPGSSYWVPPPRSTGGSLGIAQLVEKLANPLTDEQSLSTTTVRGWPSSDFFFQDAS 128

Query: 21  PRHVK 7
           PR ++
Sbjct: 129 PRTIE 133


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