BLASTX nr result

ID: Dioscorea21_contig00001490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001490
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   143   7e-53
ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like...   143   3e-52
ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like...   143   6e-52
ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinu...   143   6e-52
ref|XP_002322778.1| predicted protein [Populus trichocarpa] gi|1...   143   6e-52

>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  143 bits (361), Expect(2) = 7e-53
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 530 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 351
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 350 FHRL 339
           FH+L
Sbjct: 61  FHKL 64



 Score = 89.4 bits (220), Expect(2) = 7e-53
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -1

Query: 225 VDVSQFGYFKVLGKGRLPEGKPVVVKAKLVSKIAEKKIKEAGGAVILTA 79
           +DV+QFGYFKVLGKG LPE KP+VVKAKLVSKIAEKKIKEAGGAV+LTA
Sbjct: 98  IDVTQFGYFKVLGKGALPESKPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449521585|ref|XP_004167810.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  143 bits (361), Expect(2) = 3e-52
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 530 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 351
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 350 FHRL 339
           FH+L
Sbjct: 61  FHKL 64



 Score = 87.4 bits (215), Expect(2) = 3e-52
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -1

Query: 225 VDVSQFGYFKVLGKGRLPEGKPVVVKAKLVSKIAEKKIKEAGGAVILTA 79
           VDV+QFGYFKVLGKG LPE +P+VVKAKLVSKIAEKKIKEAGGAV+LTA
Sbjct: 98  VDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449487742|ref|XP_004157778.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  143 bits (361), Expect(2) = 6e-52
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 530 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 351
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 350 FHRL 339
           FH+L
Sbjct: 61  FHKL 64



 Score = 86.3 bits (212), Expect(2) = 6e-52
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -1

Query: 225 VDVSQFGYFKVLGKGRLPEGKPVVVKAKLVSKIAEKKIKEAGGAVILTA 79
           +DV+QFGYFKVLGKG LPE KPVVVKAKL+SKIAEKKIKE GGAV+LTA
Sbjct: 98  IDVTQFGYFKVLGKGVLPENKPVVVKAKLISKIAEKKIKENGGAVVLTA 146


>ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinus communis]
           gi|223532700|gb|EEF34482.1| 60S ribosomal protein L27a,
           putative [Ricinus communis]
          Length = 146

 Score =  143 bits (361), Expect(2) = 6e-52
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 530 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 351
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 350 FHRL 339
           FH+L
Sbjct: 61  FHKL 64



 Score = 86.3 bits (212), Expect(2) = 6e-52
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -1

Query: 225 VDVSQFGYFKVLGKGRLPEGKPVVVKAKLVSKIAEKKIKEAGGAVILTA 79
           +DV+QFGYFKVLGKG LPE +P+VVKAKLVSKIAEKKIKEAGGAV+LTA
Sbjct: 98  LDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_002322778.1| predicted protein [Populus trichocarpa] gi|118483220|gb|ABK93513.1|
           unknown [Populus trichocarpa]
           gi|118484573|gb|ABK94160.1| unknown [Populus
           trichocarpa] gi|222867408|gb|EEF04539.1| predicted
           protein [Populus trichocarpa]
          Length = 146

 Score =  143 bits (361), Expect(2) = 6e-52
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 530 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 351
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 350 FHRL 339
           FH+L
Sbjct: 61  FHKL 64



 Score = 86.3 bits (212), Expect(2) = 6e-52
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = -1

Query: 225 VDVSQFGYFKVLGKGRLPEGKPVVVKAKLVSKIAEKKIKEAGGAVILTA 79
           +DV+QFGYFKVLGKG LPE +P+VVKAKLVSKIAEKKIKEAGGAV+LTA
Sbjct: 98  IDVTQFGYFKVLGKGVLPEKQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


Top