BLASTX nr result

ID: Dioscorea21_contig00001489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001489
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   143   5e-44
ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like...   143   6e-44
ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinu...   143   1e-43
ref|XP_002311766.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-43
gb|ABK92884.1| unknown [Populus trichocarpa]                          143   1e-43

>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  143 bits (361), Expect(2) = 5e-44
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 614 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 435
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 434 FHRL 423
           FH+L
Sbjct: 61  FHKL 64



 Score = 60.5 bits (145), Expect(2) = 5e-44
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = -1

Query: 309 VDVSQFGYFKVLGKGRLPEGXXXXXXXXXXXXXAEKKIKEAGGAVVLTA 163
           +DV+QFGYFKVLGKG LPE              AEKKIKEAGGAVVLTA
Sbjct: 98  IDVTQFGYFKVLGKGALPESKPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449521585|ref|XP_004167810.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  143 bits (361), Expect(2) = 6e-44
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 614 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 435
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 434 FHRL 423
           FH+L
Sbjct: 61  FHKL 64



 Score = 60.1 bits (144), Expect(2) = 6e-44
 Identities = 33/49 (67%), Positives = 34/49 (69%)
 Frame = -1

Query: 309 VDVSQFGYFKVLGKGRLPEGXXXXXXXXXXXXXAEKKIKEAGGAVVLTA 163
           VDV+QFGYFKVLGKG LPE              AEKKIKEAGGAVVLTA
Sbjct: 98  VDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinus communis]
           gi|223532700|gb|EEF34482.1| 60S ribosomal protein L27a,
           putative [Ricinus communis]
          Length = 146

 Score =  143 bits (361), Expect(2) = 1e-43
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 614 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 435
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 434 FHRL 423
           FH+L
Sbjct: 61  FHKL 64



 Score = 58.9 bits (141), Expect(2) = 1e-43
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = -1

Query: 309 VDVSQFGYFKVLGKGRLPEGXXXXXXXXXXXXXAEKKIKEAGGAVVLTA 163
           +DV+QFGYFKVLGKG LPE              AEKKIKEAGGAVVLTA
Sbjct: 98  LDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_002311766.1| predicted protein [Populus trichocarpa] gi|222851586|gb|EEE89133.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  143 bits (361), Expect(2) = 1e-43
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 614 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 435
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 434 FHRL 423
           FH+L
Sbjct: 61  FHKL 64



 Score = 58.9 bits (141), Expect(2) = 1e-43
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = -1

Query: 309 VDVSQFGYFKVLGKGRLPEGXXXXXXXXXXXXXAEKKIKEAGGAVVLTA 163
           +DV+QFGYFKVLGKG LPE              AEKKIKEAGGAVVLTA
Sbjct: 98  IDVTQFGYFKVLGKGVLPEKQPIVVKAKLISKIAEKKIKEAGGAVVLTA 146


>gb|ABK92884.1| unknown [Populus trichocarpa]
          Length = 146

 Score =  143 bits (361), Expect(2) = 1e-43
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = -2

Query: 614 MTTRFRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 435
           MTTRF+KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 434 FHRL 423
           FH+L
Sbjct: 61  FHKL 64



 Score = 58.9 bits (141), Expect(2) = 1e-43
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = -1

Query: 309 VDVSQFGYFKVLGKGRLPEGXXXXXXXXXXXXXAEKKIKEAGGAVVLTA 163
           +DV+QFGYFKVLGKG LPE              AEKKIKEAGGAVVLTA
Sbjct: 98  IDVTQFGYFKVLGKGVLPEKQPIVVKAKLISKIAEKKIKEAGGAVVLTA 146


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