BLASTX nr result
ID: Dioscorea21_contig00001488
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00001488 (474 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chl... 68 9e-10 ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 60 2e-07 ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr... 60 2e-07 ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chl... 58 9e-07 gb|AFK47048.1| unknown [Lotus japonicus] 57 1e-06 >ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vitis vinifera] gi|147792102|emb|CAN66292.1| hypothetical protein VITISV_027031 [Vitis vinifera] Length = 109 Score = 67.8 bits (164), Expect = 9e-10 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = +3 Query: 168 MADEPKPGTPEAKKIYAPICVTMPTAKVCHK 260 MA EPKPGTPEAKKIYAPICVTMPTAK+CHK Sbjct: 79 MAGEPKPGTPEAKKIYAPICVTMPTAKICHK 109 >ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max] gi|255632908|gb|ACU16808.1| unknown [Glycine max] Length = 104 Score = 60.1 bits (144), Expect = 2e-07 Identities = 25/29 (86%), Positives = 28/29 (96%) Frame = +3 Query: 168 MADEPKPGTPEAKKIYAPICVTMPTAKVC 254 +ADEPKPGTPEAKK YAPICVTMPTA++C Sbjct: 74 VADEPKPGTPEAKKKYAPICVTMPTARIC 102 >ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative [Ricinus communis] gi|223543089|gb|EEF44624.1| Photosystem II 5 kDa protein, chloroplast precursor, putative [Ricinus communis] Length = 104 Score = 59.7 bits (143), Expect = 2e-07 Identities = 23/30 (76%), Positives = 28/30 (93%) Frame = +3 Query: 171 ADEPKPGTPEAKKIYAPICVTMPTAKVCHK 260 A+EPK GTPEAKK Y+P+CVTMPTA++CHK Sbjct: 75 AEEPKAGTPEAKKFYSPVCVTMPTARICHK 104 >ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Glycine max] Length = 105 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/29 (82%), Positives = 27/29 (93%) Frame = +3 Query: 168 MADEPKPGTPEAKKIYAPICVTMPTAKVC 254 +ADEPKPGTP AKK YAPICVTMPTA++C Sbjct: 75 VADEPKPGTPAAKKKYAPICVTMPTARIC 103 >gb|AFK47048.1| unknown [Lotus japonicus] Length = 107 Score = 57.4 bits (137), Expect = 1e-06 Identities = 24/31 (77%), Positives = 28/31 (90%) Frame = +3 Query: 168 MADEPKPGTPEAKKIYAPICVTMPTAKVCHK 260 +ADEPK G+PEAKK YAP+CVTMPTA+VC K Sbjct: 73 LADEPKNGSPEAKKKYAPVCVTMPTARVCRK 103