BLASTX nr result

ID: Dioscorea21_contig00001485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001485
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloro...   127   3e-27
ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [S...   127   3e-27
ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group] g...   126   6e-27
ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloro...   125   1e-26
gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indi...   124   2e-26

>ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine
           max]
          Length = 188

 Score =  127 bits (319), Expect = 3e-27
 Identities = 73/117 (62%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   PPIAATAAASP-KIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXX 177
           P +  +A  +P KI +LGD+IAGLTLEEAK+LVDFLQD+LGVS                 
Sbjct: 49  PRVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAGGAV 108

Query: 178 XXXXXXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKE 348
                 VEEKTEFDVVIEEVPSNARIA IK +RALT +LALK+AK+LIEGLPKKFKE
Sbjct: 109 ADAPAVVEEKTEFDVVIEEVPSNARIAVIKAVRALT-NLALKEAKELIEGLPKKFKE 164


>ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [Sorghum bicolor]
           gi|241928064|gb|EES01209.1| hypothetical protein
           SORBIDRAFT_03g030270 [Sorghum bicolor]
          Length = 181

 Score =  127 bits (319), Expect = 3e-27
 Identities = 75/114 (65%), Positives = 81/114 (71%)
 Frame = +1

Query: 10  AATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXX 189
           A TA  SPKI ELGD IAGLTLEEA+SLVD LQ+RLGV+                     
Sbjct: 46  ACTATESPKILELGDAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVVAAPAGAGAAEE 105

Query: 190 XXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351
               EKTEFDVVIEEVPS+ARIATIKV+RALT SLALK+AKDLIEGLPKK KEA
Sbjct: 106 EAPVEKTEFDVVIEEVPSSARIATIKVVRALT-SLALKEAKDLIEGLPKKLKEA 158


>ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group]
           gi|4176422|dbj|BAA37170.1| ribosomal protein L12 [Oryza
           sativa Japonica Group] gi|51038123|gb|AAT93926.1|
           putative 50S ribosomal protein L12 [Oryza sativa
           Japonica Group] gi|51854291|gb|AAU10672.1| ribosomal
           protein L12 [Oryza sativa Japonica Group]
           gi|113579908|dbj|BAF18271.1| Os05g0568300 [Oryza sativa
           Japonica Group]
          Length = 179

 Score =  126 bits (316), Expect = 6e-27
 Identities = 73/113 (64%), Positives = 82/113 (72%)
 Frame = +1

Query: 13  ATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXXX 192
           +TAA+SPK+ ELGD IAGLTLEEA+ LVD LQ+RLGVS                      
Sbjct: 45  STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104

Query: 193 XVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351
              EKTEFDVVIEEVPS+ARIATIKV+RALT +LALK+AKDLIEGLPKK KEA
Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALT-NLALKEAKDLIEGLPKKAKEA 156


>ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine
           max]
          Length = 190

 Score =  125 bits (313), Expect = 1e-26
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = +1

Query: 7   IAATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXX 186
           + +   A  KI +LGD+IAGLTLEEAK+LVDFLQD+LGVS                    
Sbjct: 54  VVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAVGAVADA 113

Query: 187 XXXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKE 348
              VEEKTEFDV+IEEVPSNARIA IK +RALT +LALK+AK+LIEGLPKKFKE
Sbjct: 114 PAAVEEKTEFDVLIEEVPSNARIAVIKAVRALT-NLALKEAKELIEGLPKKFKE 166


>gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indica Group]
          Length = 179

 Score =  124 bits (312), Expect = 2e-26
 Identities = 72/113 (63%), Positives = 81/113 (71%)
 Frame = +1

Query: 13  ATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXXX 192
           +TAA+SPK+ ELGD IAGLTLEEA+ LVD LQ+RLGVS                      
Sbjct: 45  STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104

Query: 193 XVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351
              EKTEFDVVIEEVPS+ARIATIKV+RALT +L LK+AKDLIEGLPKK KEA
Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALT-NLVLKEAKDLIEGLPKKAKEA 156


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