BLASTX nr result
ID: Dioscorea21_contig00001485
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00001485 (773 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloro... 127 3e-27 ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [S... 127 3e-27 ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group] g... 126 6e-27 ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloro... 125 1e-26 gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indi... 124 2e-26 >ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine max] Length = 188 Score = 127 bits (319), Expect = 3e-27 Identities = 73/117 (62%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Frame = +1 Query: 1 PPIAATAAASP-KIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXX 177 P + +A +P KI +LGD+IAGLTLEEAK+LVDFLQD+LGVS Sbjct: 49 PRVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAGGAV 108 Query: 178 XXXXXXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKE 348 VEEKTEFDVVIEEVPSNARIA IK +RALT +LALK+AK+LIEGLPKKFKE Sbjct: 109 ADAPAVVEEKTEFDVVIEEVPSNARIAVIKAVRALT-NLALKEAKELIEGLPKKFKE 164 >ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [Sorghum bicolor] gi|241928064|gb|EES01209.1| hypothetical protein SORBIDRAFT_03g030270 [Sorghum bicolor] Length = 181 Score = 127 bits (319), Expect = 3e-27 Identities = 75/114 (65%), Positives = 81/114 (71%) Frame = +1 Query: 10 AATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXX 189 A TA SPKI ELGD IAGLTLEEA+SLVD LQ+RLGV+ Sbjct: 46 ACTATESPKILELGDAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVVAAPAGAGAAEE 105 Query: 190 XXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351 EKTEFDVVIEEVPS+ARIATIKV+RALT SLALK+AKDLIEGLPKK KEA Sbjct: 106 EAPVEKTEFDVVIEEVPSSARIATIKVVRALT-SLALKEAKDLIEGLPKKLKEA 158 >ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group] gi|4176422|dbj|BAA37170.1| ribosomal protein L12 [Oryza sativa Japonica Group] gi|51038123|gb|AAT93926.1| putative 50S ribosomal protein L12 [Oryza sativa Japonica Group] gi|51854291|gb|AAU10672.1| ribosomal protein L12 [Oryza sativa Japonica Group] gi|113579908|dbj|BAF18271.1| Os05g0568300 [Oryza sativa Japonica Group] Length = 179 Score = 126 bits (316), Expect = 6e-27 Identities = 73/113 (64%), Positives = 82/113 (72%) Frame = +1 Query: 13 ATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXXX 192 +TAA+SPK+ ELGD IAGLTLEEA+ LVD LQ+RLGVS Sbjct: 45 STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104 Query: 193 XVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351 EKTEFDVVIEEVPS+ARIATIKV+RALT +LALK+AKDLIEGLPKK KEA Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALT-NLALKEAKDLIEGLPKKAKEA 156 >ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine max] Length = 190 Score = 125 bits (313), Expect = 1e-26 Identities = 70/114 (61%), Positives = 81/114 (71%) Frame = +1 Query: 7 IAATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXX 186 + + A KI +LGD+IAGLTLEEAK+LVDFLQD+LGVS Sbjct: 54 VVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAVGAVADA 113 Query: 187 XXXVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKE 348 VEEKTEFDV+IEEVPSNARIA IK +RALT +LALK+AK+LIEGLPKKFKE Sbjct: 114 PAAVEEKTEFDVLIEEVPSNARIAVIKAVRALT-NLALKEAKELIEGLPKKFKE 166 >gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indica Group] Length = 179 Score = 124 bits (312), Expect = 2e-26 Identities = 72/113 (63%), Positives = 81/113 (71%) Frame = +1 Query: 13 ATAAASPKIEELGDKIAGLTLEEAKSLVDFLQDRLGVSXXXXXXXXXXXXXXXXXXXXXX 192 +TAA+SPK+ ELGD IAGLTLEEA+ LVD LQ+RLGVS Sbjct: 45 STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104 Query: 193 XVEEKTEFDVVIEEVPSNARIATIKVIRALTPSLALKDAKDLIEGLPKKFKEA 351 EKTEFDVVIEEVPS+ARIATIKV+RALT +L LK+AKDLIEGLPKK KEA Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALT-NLVLKEAKDLIEGLPKKAKEA 156