BLASTX nr result

ID: Dioscorea21_contig00001447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001447
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578458.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   409   e-112
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]                 408   e-112
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   407   e-111
emb|CBI24488.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_002460541.1| hypothetical protein SORBIDRAFT_02g030210 [S...   404   e-110

>ref|XP_003578458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Brachypodium
           distachyon]
          Length = 694

 Score =  409 bits (1050), Expect = e-112
 Identities = 201/249 (80%), Positives = 225/249 (90%)
 Frame = -3

Query: 748 NGKHKATRKTGYGRPPSVLVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 569
           NG HKATR+T YGR PSVLVLLPTRELA QV ADFE YGGA GLS CC YGG  +R QE 
Sbjct: 182 NGPHKATRRTDYGRLPSVLVLLPTRELANQVHADFEFYGGAFGLSTCCAYGGSHYRPQEM 241

Query: 568 ALKKGVDIVVGTPGRVKDHIERGTIDLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 389
           A++KGVDIVVGTPGRVKD I +GT++LKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV
Sbjct: 242 AMRKGVDIVVGTPGRVKDFIVKGTLNLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 301

Query: 388 NKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQL 209
            KVQTLLFSATLP+WVKK+S RFLK DKKT DLVGNEK+KAS++V+HL LPC+RAAR Q+
Sbjct: 302 TKVQTLLFSATLPEWVKKLSMRFLKADKKTVDLVGNEKMKASSSVKHLALPCNRAARSQI 361

Query: 208 IPDIVRCYSHAGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLL 29
           IPDI++CYS  GRTIIFTETKESASEL+GL+PG+RALHGDI QAQREV++AGFRSG+FL+
Sbjct: 362 IPDIIKCYSRGGRTIIFTETKESASELSGLIPGSRALHGDIAQAQREVVIAGFRSGKFLV 421

Query: 28  LVATNVAAR 2
           LVATNVAAR
Sbjct: 422 LVATNVAAR 430


>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
          Length = 713

 Score =  408 bits (1048), Expect = e-112
 Identities = 203/249 (81%), Positives = 223/249 (89%)
 Frame = -3

Query: 748 NGKHKATRKTGYGRPPSVLVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 569
           NG  K++RKTGYGR PSVLVLLPTRELA +V ADFEVYGGA+GLS+CC+YGG P+  QE 
Sbjct: 193 NGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSCCLYGGAPYNTQEI 252

Query: 568 ALKKGVDIVVGTPGRVKDHIERGTIDLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 389
            L++GVDIV+GTPGRVKDHIERG IDL  LKFRVLDEADEML MGFV+DVELILGKVE+V
Sbjct: 253 KLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVENV 312

Query: 388 NKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQL 209
           NKVQTLLFSATLPDWVK I+A+FLKPDKKTADLVGN K+KAS NVRH+VLPCS  AR QL
Sbjct: 313 NKVQTLLFSATLPDWVKHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAPARSQL 372

Query: 208 IPDIVRCYSHAGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLL 29
           IPDI+RCYS  GRTIIFTETKESAS+LAGLLPGARALHGDI QAQREV L GFRSG+F+ 
Sbjct: 373 IPDIIRCYSSGGRTIIFTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRSGKFMT 432

Query: 28  LVATNVAAR 2
           LVATNVAAR
Sbjct: 433 LVATNVAAR 441


>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
           vinifera]
          Length = 711

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/249 (79%), Positives = 225/249 (90%)
 Frame = -3

Query: 748 NGKHKATRKTGYGRPPSVLVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 569
           NG ++ +RKTGYGRPP VLVLLPTRELA QV ADF+VYGGA+GL++CC+YGG P++ QE 
Sbjct: 183 NGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGAIGLTSCCLYGGAPYQAQEI 242

Query: 568 ALKKGVDIVVGTPGRVKDHIERGTIDLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 389
            LK+GVDIVVGTPGR+KDHIERG ID  SLKFRVLDEADEML MGFV+DVELILGKVEDV
Sbjct: 243 KLKRGVDIVVGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDV 302

Query: 388 NKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQL 209
           +KVQTLLFSATLP WVK+IS+RFLKP  KTADLVGNEK+KAS NVRH+VLPCS +AR Q+
Sbjct: 303 SKVQTLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQV 362

Query: 208 IPDIVRCYSHAGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLL 29
           IPD++RCYS  GRTIIFTETK+SASELAGLLPGARALHGDI Q+QREV L+GFRSG+F+ 
Sbjct: 363 IPDVIRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMT 422

Query: 28  LVATNVAAR 2
           LVATNVAAR
Sbjct: 423 LVATNVAAR 431


>emb|CBI24488.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/249 (79%), Positives = 225/249 (90%)
 Frame = -3

Query: 748 NGKHKATRKTGYGRPPSVLVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 569
           NG ++ +RKTGYGRPP VLVLLPTRELA QV ADF+VYGGA+GL++CC+YGG P++ QE 
Sbjct: 36  NGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGAIGLTSCCLYGGAPYQAQEI 95

Query: 568 ALKKGVDIVVGTPGRVKDHIERGTIDLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 389
            LK+GVDIVVGTPGR+KDHIERG ID  SLKFRVLDEADEML MGFV+DVELILGKVEDV
Sbjct: 96  KLKRGVDIVVGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDV 155

Query: 388 NKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQL 209
           +KVQTLLFSATLP WVK+IS+RFLKP  KTADLVGNEK+KAS NVRH+VLPCS +AR Q+
Sbjct: 156 SKVQTLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQV 215

Query: 208 IPDIVRCYSHAGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLL 29
           IPD++RCYS  GRTIIFTETK+SASELAGLLPGARALHGDI Q+QREV L+GFRSG+F+ 
Sbjct: 216 IPDVIRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMT 275

Query: 28  LVATNVAAR 2
           LVATNVAAR
Sbjct: 276 LVATNVAAR 284


>ref|XP_002460541.1| hypothetical protein SORBIDRAFT_02g030210 [Sorghum bicolor]
           gi|241923918|gb|EER97062.1| hypothetical protein
           SORBIDRAFT_02g030210 [Sorghum bicolor]
          Length = 711

 Score =  404 bits (1037), Expect = e-110
 Identities = 197/249 (79%), Positives = 224/249 (89%)
 Frame = -3

Query: 748 NGKHKATRKTGYGRPPSVLVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 569
           NG HKA+R+T +GR PSV+VLLPTRELA QV ADFE YG   GLSACCVYGG P+R QE 
Sbjct: 186 NGAHKASRRTEHGRTPSVIVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPYRPQEM 245

Query: 568 ALKKGVDIVVGTPGRVKDHIERGTIDLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDV 389
           AL++GVDIVVGTPGRVKD I +GT++LK+LKFRVLDEADEMLNMGFVDDVELILGKVED 
Sbjct: 246 ALRRGVDIVVGTPGRVKDFIVKGTLNLKNLKFRVLDEADEMLNMGFVDDVELILGKVEDA 305

Query: 388 NKVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQL 209
            KVQTLLFSATLPDWV K+S RFLK D+KT DLVGNEKLKASA+V+HL LPC++AAR Q+
Sbjct: 306 TKVQTLLFSATLPDWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKAARAQV 365

Query: 208 IPDIVRCYSHAGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLL 29
           IPDI+RCYSH GRTIIFTETK+SASEL+GL+PG+RALHGD++QAQREVILAGFR G+F +
Sbjct: 366 IPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRGGKFQV 425

Query: 28  LVATNVAAR 2
           LVATNVAAR
Sbjct: 426 LVATNVAAR 434


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