BLASTX nr result

ID: Dioscorea21_contig00001446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001446
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460541.1| hypothetical protein SORBIDRAFT_02g030210 [S...   534   e-149
ref|XP_003578458.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   533   e-149
gb|ABG73436.1| DEAD/DEAH box helicase family protein [Oryza brac...   532   e-149
tpg|DAA40575.1| TPA: putative DEAD-box ATP-dependent RNA helicas...   528   e-147
tpg|DAA62342.1| TPA: putative DEAD-box ATP-dependent RNA helicas...   528   e-147

>ref|XP_002460541.1| hypothetical protein SORBIDRAFT_02g030210 [Sorghum bicolor]
            gi|241923918|gb|EER97062.1| hypothetical protein
            SORBIDRAFT_02g030210 [Sorghum bicolor]
          Length = 711

 Score =  534 bits (1376), Expect = e-149
 Identities = 260/357 (72%), Positives = 310/357 (86%)
 Frame = -1

Query: 1082 KVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQLI 903
            KVQTLLFSATLPDWV K+S RFLK D+KT DLVGNEKLKASA+V+HL LPC++AAR Q+I
Sbjct: 307  KVQTLLFSATLPDWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKAARAQVI 366

Query: 902  PDIVRCYSHGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLLL 723
            PDI+RCYSHGGRTIIFTETK+SASEL+GL+PG+RALHGD++QAQREVILAGFR G+F +L
Sbjct: 367  PDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRGGKFQVL 426

Query: 722  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEPKFKHCITR 543
            VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+GVA++LYEP++K+ + R
Sbjct: 427  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKYSVNR 486

Query: 542  IERESGVKFEHVSAPQPADIAESAGFEAAEAITTVSDSVIPVFRSQAEQLLNSSDLPVVD 363
            +ERESGVKFEH+SAPQP D+A+SAG EAA+AI++VSDSVIPVFR QAEQLL+SS L   D
Sbjct: 487  LERESGVKFEHISAPQPTDVAQSAGSEAADAISSVSDSVIPVFRQQAEQLLSSSSLSAAD 546

Query: 362  XXXXXXXXXAGYTDIKKRSLLSSLENYVTLLLQAGKPIYSPSFAFSALRRFLPDEKIEGV 183
                      GYTDIKKRSLLSS+E+Y TL LQ G+P++SP FAF+ L+RF+P+EK+  V
Sbjct: 547  LLAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPEEKLADV 606

Query: 182  KGLALTADGTGAVFDVPADEVSNFIEGQENASMVTIEVLEKLPALQEIEHSRGNGGG 12
            KG  LTADGTG VFDVPA +V ++I+  ENA+ VTI+ +++LP LQE E SRGN GG
Sbjct: 607  KGATLTADGTGVVFDVPAADVEDYIQASENAAQVTIDEVKQLPPLQEKEQSRGNSGG 663



 Score =  115 bits (288), Expect = 3e-23
 Identities = 54/73 (73%), Positives = 60/73 (82%)
 Frame = -3

Query: 1446 NGKHKATRKTGYGRPPSVIVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 1267
            NG HKA+R+T +GR PSVIVLLPTRELA QV ADFE YG   GLSACCVYGG P+R QE 
Sbjct: 186  NGAHKASRRTEHGRTPSVIVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPYRPQEM 245

Query: 1266 TLKKGVDIVVGTP 1228
             L++GVDIVVGTP
Sbjct: 246  ALRRGVDIVVGTP 258


>ref|XP_003578458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Brachypodium
            distachyon]
          Length = 694

 Score =  533 bits (1372), Expect = e-149
 Identities = 260/358 (72%), Positives = 313/358 (87%), Gaps = 1/358 (0%)
 Frame = -1

Query: 1082 KVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQLI 903
            KVQTLLFSATLP+WVKK+S RFLK DKKT DLVGNEK+KAS++V+HL LPC+RAAR Q+I
Sbjct: 303  KVQTLLFSATLPEWVKKLSMRFLKADKKTVDLVGNEKMKASSSVKHLALPCNRAARSQII 362

Query: 902  PDIVRCYSHGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLLL 723
            PDI++CYS GGRTIIFTETKESASEL+GL+PG+RALHGDI QAQREV++AGFRSG+FL+L
Sbjct: 363  PDIIKCYSRGGRTIIFTETKESASELSGLIPGSRALHGDIAQAQREVVIAGFRSGKFLVL 422

Query: 722  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEPKFKHCITR 543
            VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+GVA++L+EP++K+ +TR
Sbjct: 423  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKYSVTR 482

Query: 542  IERESGVKFEHVSAPQPADIAESAGFEAAEAITTVSDSVIPVFRSQAEQLLNSSDLPVVD 363
            IERESGVKFEH+SAPQP D+A+SAG EAA+AI +VSDSVIPVFR QAE+LL+SS +  VD
Sbjct: 483  IERESGVKFEHISAPQPTDVAQSAGNEAADAIASVSDSVIPVFRQQAEELLSSSSMSAVD 542

Query: 362  XXXXXXXXXAGYTDIKKRSLLSSLENYVTLLLQAGKPIYSPSFAFSALRRFLPDEKIEGV 183
                      GYTDIKKRSLLSS+ENY TL LQ G+P+Y+P FA + L+RF+P++K+  V
Sbjct: 543  LLAKALAKAVGYTDIKKRSLLSSMENYTTLQLQTGRPMYTPGFALTTLKRFMPEDKLSDV 602

Query: 182  KGLALTADGTGAVFDVPADEVSNFIEGQENASMVTIEVLEKLPALQEIE-HSRGNGGG 12
             G+ LTADGTGAVFDVP+ EV ++I G ENA+MVT++ +++LP LQE E  SRGN GG
Sbjct: 603  HGITLTADGTGAVFDVPSAEVQDYILGSENAAMVTLDEVKQLPPLQEREQQSRGNSGG 660



 Score =  115 bits (288), Expect = 3e-23
 Identities = 54/73 (73%), Positives = 59/73 (80%)
 Frame = -3

Query: 1446 NGKHKATRKTGYGRPPSVIVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 1267
            NG HKATR+T YGR PSV+VLLPTRELA QV ADFE YGGA GLS CC YGG  +R QE 
Sbjct: 182  NGPHKATRRTDYGRLPSVLVLLPTRELANQVHADFEFYGGAFGLSTCCAYGGSHYRPQEM 241

Query: 1266 TLKKGVDIVVGTP 1228
             ++KGVDIVVGTP
Sbjct: 242  AMRKGVDIVVGTP 254


>gb|ABG73436.1| DEAD/DEAH box helicase family protein [Oryza brachyantha]
          Length = 688

 Score =  532 bits (1371), Expect = e-149
 Identities = 265/359 (73%), Positives = 310/359 (86%), Gaps = 1/359 (0%)
 Frame = -1

Query: 1082 KVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQLI 903
            KVQTLLFSATLPDWV K+S RFLKP KKT DLVG+EKLKASA+VRHL LPC+RAAR Q+I
Sbjct: 290  KVQTLLFSATLPDWVGKLSLRFLKPGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVI 349

Query: 902  PDIVRCYSHGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLLL 723
            PDI+RCYS GGRTIIFTETKESASEL+GL+ G+RALHGD+ QAQREVILAGFRSG+FL+L
Sbjct: 350  PDIIRCYSRGGRTIIFTETKESASELSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVL 409

Query: 722  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEPKFKHCITR 543
            VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+GVA++L++P+ K  + R
Sbjct: 410  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFDPRHKFNVNR 469

Query: 542  IERESGVKFEHVSAPQPADIAESAGFEAAEAITTVSDSVIPVFRSQAEQLLNSSDLPVVD 363
            IERESGVKFEH+SAPQP D+A+SAG EAAEAI +VSDSVIPVFR QAEQLL+SS +   D
Sbjct: 470  IERESGVKFEHISAPQPTDVAQSAGSEAAEAIASVSDSVIPVFREQAEQLLSSSGMSAAD 529

Query: 362  XXXXXXXXXAGYTDIKKRSLLSSLENYVTLLLQAGKPIYSPSFAFSALRRFLPDEKIEGV 183
                      GYTDIKKRSLLSS+EN+ TLLLQ G+ +Y+P F  S L+RF+P+E++  V
Sbjct: 530  LLAKALAKAVGYTDIKKRSLLSSMENHTTLLLQTGRSVYAPGFVLSTLKRFMPEERLADV 589

Query: 182  KGLALTADGTGAVFDVPADEVSNFIEGQENASMVTIEVLEKLPALQEIEHSRG-NGGGR 9
            KG+ LTADGTGAVFDVP+ EV ++I+G ENA+MVTIE +++LP LQE + SRG NGGGR
Sbjct: 590  KGITLTADGTGAVFDVPSAEVEDYIQGSENAAMVTIEEVKQLPPLQERDQSRGSNGGGR 648



 Score =  108 bits (270), Expect = 3e-21
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -3

Query: 1446 NGKHKATRKTGYGRPPSVIVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 1267
            NGKHKA+    YGRPPSV+VLLPTRELAKQV  DFE YG   GLS+CCVYGG  +R QE 
Sbjct: 170  NGKHKASG-ADYGRPPSVLVLLPTRELAKQVHTDFEFYGATFGLSSCCVYGGSEYRPQEM 228

Query: 1266 TLKKGVDIVVGTP 1228
             ++KGVDIVVGTP
Sbjct: 229  KIRKGVDIVVGTP 241


>tpg|DAA40575.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 671

 Score =  528 bits (1360), Expect = e-147
 Identities = 258/357 (72%), Positives = 309/357 (86%)
 Frame = -1

Query: 1082 KVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQLI 903
            KVQTLLFSATLPDWV K+S RFLK D+KT DLVGNEKLKASA+V+HL LPC++AAR QLI
Sbjct: 308  KVQTLLFSATLPDWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKAARAQLI 367

Query: 902  PDIVRCYSHGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLLL 723
            PDI+RCYSHGGRTIIFTETK+SASEL+GL+PG+RALHGD++QAQREVILAGFRSG+F +L
Sbjct: 368  PDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRSGKFQVL 427

Query: 722  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEPKFKHCITR 543
            VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+GVA++LYEP++K+ ++R
Sbjct: 428  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKYSVSR 487

Query: 542  IERESGVKFEHVSAPQPADIAESAGFEAAEAITTVSDSVIPVFRSQAEQLLNSSDLPVVD 363
            +ERESGVKFEH+SAPQP D+A+SAG EAA+AI +VSDSVIPVFR QAEQLL+SS L   D
Sbjct: 488  LERESGVKFEHISAPQPTDVAQSAGSEAADAIASVSDSVIPVFRQQAEQLLSSSTLSAAD 547

Query: 362  XXXXXXXXXAGYTDIKKRSLLSSLENYVTLLLQAGKPIYSPSFAFSALRRFLPDEKIEGV 183
                      GYTDIKKRSLLSS+E+Y TL LQ G+ ++SP FAF+ L+RF+P+EK+  V
Sbjct: 548  LLAKALAKAVGYTDIKKRSLLSSMEDYATLHLQTGRQMWSPGFAFTILKRFMPEEKLADV 607

Query: 182  KGLALTADGTGAVFDVPADEVSNFIEGQENASMVTIEVLEKLPALQEIEHSRGNGGG 12
            KG  LTADGTG VFDVPA +V ++I+  ENA+ VTI+ +++LP LQE + + G GGG
Sbjct: 608  KGATLTADGTGVVFDVPAADVEDYIQASENAAQVTIDEVQQLPPLQEKQLAAGGGGG 664



 Score =  112 bits (279), Expect = 3e-22
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = -3

Query: 1446 NGKHKATRKTGYGRPPSVIVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 1267
            NG +KA+R+T +GR PSV+VLLPTRELA QV ADFE YG   GLSACCVYGG P+R QE 
Sbjct: 187  NGANKASRRTEHGRTPSVLVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPYRPQEM 246

Query: 1266 TLKKGVDIVVGTP 1228
             L++GVDIVVGTP
Sbjct: 247  ALRRGVDIVVGTP 259


>tpg|DAA62342.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 707

 Score =  528 bits (1359), Expect = e-147
 Identities = 257/357 (71%), Positives = 309/357 (86%)
 Frame = -1

Query: 1082 KVQTLLFSATLPDWVKKISARFLKPDKKTADLVGNEKLKASANVRHLVLPCSRAARPQLI 903
            KVQTLLFSATLP+WV K+S RFLK D+KT DLVGNEKLKASA+V+HL LPC++AAR Q+I
Sbjct: 306  KVQTLLFSATLPEWVNKLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKAARAQVI 365

Query: 902  PDIVRCYSHGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILAGFRSGRFLLL 723
            PDI+RCYSHGGRTIIFTETK+SASEL+GL+ G+RALHGD+ QAQREVILAGFRSG+F +L
Sbjct: 366  PDIIRCYSHGGRTIIFTETKDSASELSGLIHGSRALHGDVAQAQREVILAGFRSGKFQVL 425

Query: 722  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEPKFKHCITR 543
            VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+GVA++LYEP++KH ++R
Sbjct: 426  VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKHSVSR 485

Query: 542  IERESGVKFEHVSAPQPADIAESAGFEAAEAITTVSDSVIPVFRSQAEQLLNSSDLPVVD 363
            +ERESGVKFEH+SAPQP D+A+SAG EAA+AI +VSDSVIP+FR QAEQLL+SS L   D
Sbjct: 486  LERESGVKFEHISAPQPTDVAQSAGSEAADAIASVSDSVIPIFRQQAEQLLSSSSLSAAD 545

Query: 362  XXXXXXXXXAGYTDIKKRSLLSSLENYVTLLLQAGKPIYSPSFAFSALRRFLPDEKIEGV 183
                      GYTDIKKRSLLSSLE+Y TL LQ G+P++SP FAF+ L+RF+P++K+  V
Sbjct: 546  LLAKALAKAVGYTDIKKRSLLSSLEDYSTLHLQTGRPMWSPGFAFTILKRFMPEDKLADV 605

Query: 182  KGLALTADGTGAVFDVPADEVSNFIEGQENASMVTIEVLEKLPALQEIEHSRGNGGG 12
            KG  LTADGTG VFDVPA +V ++I+  E+A+ VTI+ +++LP LQE + SRGN GG
Sbjct: 606  KGATLTADGTGVVFDVPAADVEDYIQASESAAQVTIDEVKQLPPLQEKDQSRGNSGG 662



 Score =  112 bits (279), Expect = 3e-22
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = -3

Query: 1446 NGKHKATRKTGYGRPPSVIVLLPTRELAKQVSADFEVYGGAVGLSACCVYGGDPFRGQEF 1267
            NG +KA+R+T +GR PSV+VLLPTRELA QV ADFE YG   GLSACCVYGG P+R QE 
Sbjct: 185  NGANKASRRTEHGRTPSVLVLLPTRELANQVHADFEFYGATFGLSACCVYGGSPYRPQEM 244

Query: 1266 TLKKGVDIVVGTP 1228
             L++GVDIVVGTP
Sbjct: 245  ALRRGVDIVVGTP 257


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