BLASTX nr result

ID: Dioscorea21_contig00001444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001444
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu...    77   2e-12
ref|XP_003577639.1| PREDICTED: uncharacterized protein LOC100842...    74   2e-11
dbj|BAJ88869.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   2e-11
dbj|BAK05864.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   2e-11
ref|XP_002445763.1| hypothetical protein SORBIDRAFT_07g025380 [S...    73   2e-11

>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 524

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = -3

Query: 417 NNKAGGHAIGTPPSSHPIQSEQPAIAKQPPGPRMPDGTRGFTIGRGKPVA 268
           +N  G H +GTPPS++ I +EQP++AKQPPGPRMPDGT+GF +GRGKPVA
Sbjct: 472 HNNRGNH-VGTPPSNNLIINEQPSMAKQPPGPRMPDGTKGFAMGRGKPVA 520


>ref|XP_003577639.1| PREDICTED: uncharacterized protein LOC100842995 [Brachypodium
           distachyon]
          Length = 488

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 8/56 (14%)
 Frame = -3

Query: 417 NNKAGGHAIGTPPSSHPIQSEQ-------PAIA-KQPPGPRMPDGTRGFTIGRGKP 274
           NN++G H +GTPPSSHP+++E        PA A KQ PGPRMPDGTRGF++GRGKP
Sbjct: 420 NNRSGAHPVGTPPSSHPVKTEPQQTQYPPPAGASKQHPGPRMPDGTRGFSMGRGKP 475


>dbj|BAJ88869.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 8/56 (14%)
 Frame = -3

Query: 417 NNKAGGHAIGTPPSSHPIQSEQ-------PAIA-KQPPGPRMPDGTRGFTIGRGKP 274
           NN++G H +GTPPSSHP+++EQ       PA A KQ PGPRMPDGTRGF++GRG P
Sbjct: 284 NNRSGAHPVGTPPSSHPVKAEQQQTQSSPPAGANKQLPGPRMPDGTRGFSMGRGMP 339


>dbj|BAK05864.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 483

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 8/56 (14%)
 Frame = -3

Query: 417 NNKAGGHAIGTPPSSHPIQSEQ-------PAIA-KQPPGPRMPDGTRGFTIGRGKP 274
           NN++G H +GTPPSSHP+++EQ       PA A KQ PGPRMPDGTRGF++GRG P
Sbjct: 416 NNRSGAHPVGTPPSSHPVKAEQQQTQSSPPAGANKQLPGPRMPDGTRGFSMGRGMP 471


>ref|XP_002445763.1| hypothetical protein SORBIDRAFT_07g025380 [Sorghum bicolor]
           gi|241942113|gb|EES15258.1| hypothetical protein
           SORBIDRAFT_07g025380 [Sorghum bicolor]
          Length = 437

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = -3

Query: 417 NNKAGGHAIGTPPSSHPIQSEQPAIAKQPPGPRMPDGTRGFTIGRGKPVAPPT 259
           NN+   H IGTPPS HP      A+ K PPGPRMPDGT+GFT+GRGKP+ P T
Sbjct: 379 NNRDAHHPIGTPPSEHP------AVPKPPPGPRMPDGTKGFTMGRGKPLNPTT 425


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