BLASTX nr result

ID: Dioscorea21_contig00001428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001428
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19672.3| unnamed protein product [Vitis vinifera]              171   8e-41
ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   168   5e-40
ref|XP_002283027.1| PREDICTED: eukaryotic peptide chain release ...   168   5e-40
ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002512711.1| eukaryotic peptide chain release factor subu...   167   1e-39

>emb|CBI19672.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  171 bits (432), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 91/93 (97%)
 Frame = +1

Query: 91  VLSLLKMADGHETDKNIEIWKVKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDE 270
           V ++L MADGHETDKNIEIWK+KKLIKALE+ARGNGTSMISLIMPPRDQISRVTKMLGDE
Sbjct: 26  VSTVLTMADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDE 85

Query: 271 YGTASNIKSRVNRQSVLGAITSAQQRLKLYNKV 369
           +GTASNIKSRVNRQSVLGAITSAQQRLKLYNKV
Sbjct: 86  FGTASNIKSRVNRQSVLGAITSAQQRLKLYNKV 118


>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3
           [Vitis vinifera]
          Length = 437

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/87 (96%), Positives = 87/87 (100%)
 Frame = +1

Query: 109 MADGHETDKNIEIWKVKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 288
           MADGHETDKNIEIWK+KKLIKALE+ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1   MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 289 IKSRVNRQSVLGAITSAQQRLKLYNKV 369
           IKSRVNRQSVLGAITSAQQRLKLYNKV
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKV 87


>ref|XP_002283027.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3
           [Vitis vinifera] gi|147780810|emb|CAN77215.1|
           hypothetical protein VITISV_036372 [Vitis vinifera]
          Length = 437

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/87 (96%), Positives = 87/87 (100%)
 Frame = +1

Query: 109 MADGHETDKNIEIWKVKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 288
           MADGHETDKNIEIWK+KKLIKALE+ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1   MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 289 IKSRVNRQSVLGAITSAQQRLKLYNKV 369
           IKSRVNRQSVLGAITSAQQRLKLYNKV
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKV 87


>ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|222861840|gb|EEE99382.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  167 bits (424), Expect = 6e-40
 Identities = 84/87 (96%), Positives = 87/87 (100%)
 Frame = +1

Query: 109 MADGHETDKNIEIWKVKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 288
           MADGHE+DKNIEIWK+KKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1   MADGHESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 289 IKSRVNRQSVLGAITSAQQRLKLYNKV 369
           IKSRVNRQSVLGAITSAQQRLKLYNKV
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKV 87


>ref|XP_002512711.1| eukaryotic peptide chain release factor subunit, putative [Ricinus
           communis] gi|223548672|gb|EEF50163.1| eukaryotic peptide
           chain release factor subunit, putative [Ricinus
           communis]
          Length = 436

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/87 (95%), Positives = 87/87 (100%)
 Frame = +1

Query: 109 MADGHETDKNIEIWKVKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 288
           M+DGHETDKNIEIWK+KKLIKALE+ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1   MSDGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 289 IKSRVNRQSVLGAITSAQQRLKLYNKV 369
           IKSRVNRQSVLGAITSAQQRLKLYNKV
Sbjct: 61  IKSRVNRQSVLGAITSAQQRLKLYNKV 87


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