BLASTX nr result

ID: Dioscorea21_contig00001400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001400
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV07578.1| thioredoxin f5, partial [Solanum tuberosum]            130   1e-28
gb|AFV07573.1| DsbA c3, partial [Solanum tuberosum]                   130   1e-28
gb|AFK40324.1| unknown [Medicago truncatula]                          125   3e-27
ref|XP_002510591.1| conserved hypothetical protein [Ricinus comm...   125   4e-27
ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854...   122   2e-26

>gb|AFV07578.1| thioredoxin f5, partial [Solanum tuberosum]
          Length = 206

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/109 (55%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 LIFIFMLVIEISL----GQIIIPKKYDGFPLYNSKNKDEGSIMVEAFFDPLCPDSRDSWP 150
           ++  F+ VI +S+     Q + P +YDGFP Y  +  D  +I++EAF+DP+CPDSRDSWP
Sbjct: 12  VLLFFLSVINVSVRDVDAQSLPPARYDGFP-YQKQLDDSNTILIEAFYDPVCPDSRDSWP 70

Query: 149 PLKQALQYYSPHLSFIVHPFPLPYHSNAYIASLALHIANNLNTSTTFPL 3
           PLKQAL +Y    S +VH  PLPYH NA++AS  LHIAN LNTS+TFPL
Sbjct: 71  PLKQALHFYGSRTSLVVHLLPLPYHDNAFVASRTLHIANELNTSSTFPL 119


>gb|AFV07573.1| DsbA c3, partial [Solanum tuberosum]
          Length = 194

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/109 (55%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 LIFIFMLVIEISL----GQIIIPKKYDGFPLYNSKNKDEGSIMVEAFFDPLCPDSRDSWP 150
           ++  F+ VI +S+     Q + P +YDGFP Y  +  D  +I++EAF+DP+CPDSRDSWP
Sbjct: 12  VLLFFLSVINVSVRDVDAQSLPPARYDGFP-YQKQLDDSNTILIEAFYDPVCPDSRDSWP 70

Query: 149 PLKQALQYYSPHLSFIVHPFPLPYHSNAYIASLALHIANNLNTSTTFPL 3
           PLKQAL +Y    S +VH  PLPYH NA++AS  LHIAN LNTS+TFPL
Sbjct: 71  PLKQALHFYGSRTSLVVHLLPLPYHDNAFVASRTLHIANELNTSSTFPL 119


>gb|AFK40324.1| unknown [Medicago truncatula]
          Length = 230

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/104 (54%), Positives = 73/104 (70%)
 Frame = -2

Query: 314 IFIFMLVIEISLGQIIIPKKYDGFPLYNSKNKDEGSIMVEAFFDPLCPDSRDSWPPLKQA 135
           + I + +  +  G  I PKKYDGF   N  +    +I +EAF+DPLCPDS DSWPPLK+A
Sbjct: 9   VLILLALQSLVGGDYIPPKKYDGFVYKNRHHLSYDTIQIEAFYDPLCPDSADSWPPLKKA 68

Query: 134 LQYYSPHLSFIVHPFPLPYHSNAYIASLALHIANNLNTSTTFPL 3
           L +YS  +SF+VH  PLPYH NA++AS ALHI N+LN + TFPL
Sbjct: 69  LHHYSSRVSFVVHLLPLPYHDNAFVASRALHIVNSLNRTATFPL 112


>ref|XP_002510591.1| conserved hypothetical protein [Ricinus communis]
           gi|223551292|gb|EEF52778.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/112 (57%), Positives = 76/112 (67%), Gaps = 7/112 (6%)
 Frame = -2

Query: 317 LIFIFMLVIEISL----GQIIIPKKYDGFPLYNSKNK---DEGSIMVEAFFDPLCPDSRD 159
           LI +F  VI +S      Q + P +YDGF LY           +I++EAFFDP+CPDSRD
Sbjct: 6   LILLFAFVINVSKWGLDAQKLPPARYDGF-LYEKHGPCRHHADTILIEAFFDPVCPDSRD 64

Query: 158 SWPPLKQALQYYSPHLSFIVHPFPLPYHSNAYIASLALHIANNLNTSTTFPL 3
           SWPPLKQAL YY    S ++H  PLPYH NAY+AS ALHIANNLN S+TFPL
Sbjct: 65  SWPPLKQALHYYGSRTSLLLHLLPLPYHDNAYVASRALHIANNLNHSSTFPL 116


>ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854733 [Vitis vinifera]
          Length = 234

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/108 (51%), Positives = 76/108 (70%)
 Frame = -2

Query: 326 VVHLIFIFMLVIEISLGQIIIPKKYDGFPLYNSKNKDEGSIMVEAFFDPLCPDSRDSWPP 147
           ++ L+  ++   E  +  + IP K+DGF +YN       SI++EAFFDP+CPDSRD+WPP
Sbjct: 13  LLSLVLFYVFEHESIVRAVSIPAKFDGF-VYNYTGTGIDSIIIEAFFDPVCPDSRDAWPP 71

Query: 146 LKQALQYYSPHLSFIVHPFPLPYHSNAYIASLALHIANNLNTSTTFPL 3
           LK+A+ YY+P +S IVHPF LPYH NA+  S ALHI N LN+S T+ L
Sbjct: 72  LKRAIAYYAPRVSLIVHPFALPYHDNAFATSRALHIVNKLNSSATYHL 119


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