BLASTX nr result

ID: Dioscorea21_contig00001370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001370
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8...   212   2e-53
gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]      211   6e-53
ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Po...   208   3e-52
gb|AFK45661.1| unknown [Medicago truncatula]                          208   4e-52
ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago tr...   208   4e-52

>ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
           vinifera]
          Length = 274

 Score =  212 bits (540), Expect = 2e-53
 Identities = 102/120 (85%), Positives = 103/120 (85%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGEVINGRYAMLGAVGAIAPEILG+ GLIPPETALPWFKTGV PPAGTYNYWAD YTLFV
Sbjct: 98  YGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTGVFPPAGTYNYWADPYTLFV 157

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
            EMALMGFAEHRRFQDW NPGSMGKQYFLG EKYLGGSGDPAY           GKDEKS
Sbjct: 158 FEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKS 217


>gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/120 (83%), Positives = 105/120 (87%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGE+INGRYAMLGAVGAIAPEILG+AGLIPPETALPWF+TGVIPPAGTY+YWAD YTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
            EMALMGFAEHRRFQDW  PGSMGKQYFLGFEKYLGGSG+PAY           GKDEKS
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKS 218


>ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
           gi|118485656|gb|ABK94678.1| unknown [Populus
           trichocarpa] gi|222861991|gb|EEE99533.1|
           light-harvesting complex I protein Lhca3 [Populus
           trichocarpa]
          Length = 274

 Score =  208 bits (530), Expect = 3e-52
 Identities = 99/120 (82%), Positives = 104/120 (86%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGE+INGRYAMLGAVGAIAPEILG+AGLIPPETALPWF+TGVIPPAGTY+YWAD YTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
            EMALMGFAEHRR QDW  PGSMGKQYFLGFEKYLGGSG+PAY           GKDEKS
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKS 218


>gb|AFK45661.1| unknown [Medicago truncatula]
          Length = 277

 Score =  208 bits (529), Expect = 4e-52
 Identities = 98/120 (81%), Positives = 104/120 (86%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV
Sbjct: 102 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 161

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
           +EMA MGFAEHRRFQDWYNPGSMGKQYFLG EK LGGSG+PAY           GKDEKS
Sbjct: 162 MEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 221


>ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355519418|gb|AET01042.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 573

 Score =  208 bits (529), Expect = 4e-52
 Identities = 98/120 (81%), Positives = 104/120 (86%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV
Sbjct: 102 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 161

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
           +EMA MGFAEHRRFQDWYNPGSMGKQYFLG EK LGGSG+PAY           GKDEKS
Sbjct: 162 MEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 221



 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/120 (80%), Positives = 103/120 (85%)
 Frame = -3

Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182
           YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV
Sbjct: 398 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 457

Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2
           +EMA MGFAEHRR QDWYNPGSMGKQYFLG EK LGGSG+PAY           GKDEKS
Sbjct: 458 MEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 517


Top