BLASTX nr result
ID: Dioscorea21_contig00001370
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00001370 (363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8... 212 2e-53 gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides] 211 6e-53 ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Po... 208 3e-52 gb|AFK45661.1| unknown [Medicago truncatula] 208 4e-52 ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago tr... 208 4e-52 >ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis vinifera] Length = 274 Score = 212 bits (540), Expect = 2e-53 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGEVINGRYAMLGAVGAIAPEILG+ GLIPPETALPWFKTGV PPAGTYNYWAD YTLFV Sbjct: 98 YGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTGVFPPAGTYNYWADPYTLFV 157 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 EMALMGFAEHRRFQDW NPGSMGKQYFLG EKYLGGSGDPAY GKDEKS Sbjct: 158 FEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKS 217 >gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides] Length = 274 Score = 211 bits (536), Expect = 6e-53 Identities = 100/120 (83%), Positives = 105/120 (87%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGE+INGRYAMLGAVGAIAPEILG+AGLIPPETALPWF+TGVIPPAGTY+YWAD YTLFV Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 EMALMGFAEHRRFQDW PGSMGKQYFLGFEKYLGGSG+PAY GKDEKS Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKS 218 >ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa] gi|118485656|gb|ABK94678.1| unknown [Populus trichocarpa] gi|222861991|gb|EEE99533.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa] Length = 274 Score = 208 bits (530), Expect = 3e-52 Identities = 99/120 (82%), Positives = 104/120 (86%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGE+INGRYAMLGAVGAIAPEILG+AGLIPPETALPWF+TGVIPPAGTY+YWAD YTLFV Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 EMALMGFAEHRR QDW PGSMGKQYFLGFEKYLGGSG+PAY GKDEKS Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKS 218 >gb|AFK45661.1| unknown [Medicago truncatula] Length = 277 Score = 208 bits (529), Expect = 4e-52 Identities = 98/120 (81%), Positives = 104/120 (86%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV Sbjct: 102 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 161 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 +EMA MGFAEHRRFQDWYNPGSMGKQYFLG EK LGGSG+PAY GKDEKS Sbjct: 162 MEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 221 >ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula] gi|355519418|gb|AET01042.1| Chlorophyll a-b binding protein [Medicago truncatula] Length = 573 Score = 208 bits (529), Expect = 4e-52 Identities = 98/120 (81%), Positives = 104/120 (86%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV Sbjct: 102 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 161 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 +EMA MGFAEHRRFQDWYNPGSMGKQYFLG EK LGGSG+PAY GKDEKS Sbjct: 162 MEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 221 Score = 206 bits (523), Expect = 2e-51 Identities = 97/120 (80%), Positives = 103/120 (85%) Frame = -3 Query: 361 YGEVINGRYAMLGAVGAIAPEILGQAGLIPPETALPWFKTGVIPPAGTYNYWADNYTLFV 182 YGE+INGR+AMLGA GAIAPEILG+AGLIP ETALPWF+TGVIPPAGTYNYWADNYTLFV Sbjct: 398 YGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFV 457 Query: 181 LEMALMGFAEHRRFQDWYNPGSMGKQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEKS 2 +EMA MGFAEHRR QDWYNPGSMGKQYFLG EK LGGSG+PAY GKDEKS Sbjct: 458 MEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKS 517