BLASTX nr result

ID: Dioscorea21_contig00001359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001359
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047612.1| Os02g0654500 [Oryza sativa Japonica Group] g...   330   2e-88
ref|XP_002454549.1| hypothetical protein SORBIDRAFT_04g033120 [S...   330   4e-88
gb|ACG38053.1| ubiquitin carboxyl-terminal hydrolase isozyme L3 ...   329   7e-88
ref|XP_004147225.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   326   6e-87
emb|CAC39056.1| putative protein [Oryza sativa]                       325   1e-86

>ref|NP_001047612.1| Os02g0654500 [Oryza sativa Japonica Group]
           gi|49388197|dbj|BAD25320.1| carboxyl-terminal
           proteinase-like [Oryza sativa Japonica Group]
           gi|113537143|dbj|BAF09526.1| Os02g0654500 [Oryza sativa
           Japonica Group]
          Length = 229

 Score =  330 bits (847), Expect = 2e-88
 Identities = 162/225 (72%), Positives = 186/225 (82%), Gaps = 7/225 (3%)
 Frame = +1

Query: 40  KRWLPLEANPDVMNQFVWGLGVPEDEVEFNDVYGLDDELLDMVPKPVLAVLFLFPYNEAK 219
           KRW+PLEANPDVMNQF+WGLGV E E +F DVYGLDDELL MVP+PVLAVLFL+P     
Sbjct: 3   KRWIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLD 62

Query: 220 EEIQGSG-------GQKEPSKQVYFLKQTVDNACGTIGVLHALGNATSKINLVEGSYFDR 378
           ++ + SG       G K+ SK+VYF KQTV NACGT+GV+HA+GNA SK+ LVEGSYFDR
Sbjct: 63  DDEEESGAAATSTAGDKDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDR 122

Query: 379 FFKSTSNMDPFERAAFLEADREMEDAHSVAASAGDTEANPNVEEHYICFTCVDGELYELD 558
           F+K T +MDP +RAAFLE D EMEDAHSVAASAGDT+AN  V EH++CF+CVDGELYELD
Sbjct: 123 FYKQTVDMDPVQRAAFLEEDDEMEDAHSVAASAGDTDANVEVNEHFVCFSCVDGELYELD 182

Query: 559 GVKSQPISHGPSSPTSLLKDAAEVIKAIIQKNPDSMNFNVMALSK 693
           G KSQPI HGPSSP +LL+DAA+VIKA I  NPDSMNFNVMALSK
Sbjct: 183 GRKSQPICHGPSSPDTLLQDAAKVIKARIASNPDSMNFNVMALSK 227


>ref|XP_002454549.1| hypothetical protein SORBIDRAFT_04g033120 [Sorghum bicolor]
           gi|241934380|gb|EES07525.1| hypothetical protein
           SORBIDRAFT_04g033120 [Sorghum bicolor]
          Length = 229

 Score =  330 bits (845), Expect = 4e-88
 Identities = 163/227 (71%), Positives = 190/227 (83%), Gaps = 8/227 (3%)
 Frame = +1

Query: 40  KRWLPLEANPDVMNQFVWGLGVPEDEVEFNDVYGLDDELLDMVPKPVLAVLFLFPYN--- 210
           KRW+PLEANPDVMNQF+WGLGVPE +V+F DVYGLDDELL MVP+PVLAVLFL+P     
Sbjct: 3   KRWIPLEANPDVMNQFIWGLGVPEGDVQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLD 62

Query: 211 -EAKEEIQGSGGQ----KEPSKQVYFLKQTVDNACGTIGVLHALGNATSKINLVEGSYFD 375
            E KEE   S       KE SK+VYF KQTV NACGT+GV+HA+GNA S+I LVEGSYF+
Sbjct: 63  EEEKEESSASATSTTRGKELSKKVYFTKQTVGNACGTVGVIHAIGNAKSQIKLVEGSYFE 122

Query: 376 RFFKSTSNMDPFERAAFLEADREMEDAHSVAASAGDTEANPNVEEHYICFTCVDGELYEL 555
           +F+K T++MDP +RA FLE D EMEDAHSVAASAGDT+AN +V EH++CF+CVDGELYEL
Sbjct: 123 KFYKQTADMDPIQRATFLEEDDEMEDAHSVAASAGDTDANVDVNEHFVCFSCVDGELYEL 182

Query: 556 DGVKSQPISHGPSSPTSLLKDAAEVIKAIIQKNPDSMNFNVMALSKK 696
           DG KSQP SHGPSSP +LL+DAA+VIKA I +NP+SMNFNVMALSKK
Sbjct: 183 DGRKSQPTSHGPSSPETLLQDAAKVIKARIAENPNSMNFNVMALSKK 229


>gb|ACG38053.1| ubiquitin carboxyl-terminal hydrolase isozyme L3 [Zea mays]
           gi|219887279|gb|ACL54014.1| unknown [Zea mays]
           gi|413923316|gb|AFW63248.1| Ubiquitin carboxyl-terminal
           hydrolase isozyme L3 [Zea mays]
          Length = 229

 Score =  329 bits (843), Expect = 7e-88
 Identities = 161/227 (70%), Positives = 191/227 (84%), Gaps = 8/227 (3%)
 Frame = +1

Query: 40  KRWLPLEANPDVMNQFVWGLGVPEDEVEFNDVYGLDDELLDMVPKPVLAVLFLFPYNEAK 219
           KRW+PLEANPDV+NQF+WGLGV E++V+F DVYGLDDELL MVP+PVLAVLFL+P     
Sbjct: 3   KRWIPLEANPDVLNQFIWGLGVHEEDVQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLD 62

Query: 220 EEIQGSG--------GQKEPSKQVYFLKQTVDNACGTIGVLHALGNATSKINLVEGSYFD 375
           EE + S           KE SK+VYF KQTV NACGT+GV+HA+GNATS+I LVEGSYF+
Sbjct: 63  EEKEESSVSAATSTSAGKELSKKVYFTKQTVGNACGTVGVIHAIGNATSQIKLVEGSYFE 122

Query: 376 RFFKSTSNMDPFERAAFLEADREMEDAHSVAASAGDTEANPNVEEHYICFTCVDGELYEL 555
           +F+K T++MDP +RAAFLE D EMEDAHSVAASAGDT+AN +V EH++CF+CVDGELYEL
Sbjct: 123 KFYKQTADMDPAQRAAFLEEDDEMEDAHSVAASAGDTDANVDVNEHFVCFSCVDGELYEL 182

Query: 556 DGVKSQPISHGPSSPTSLLKDAAEVIKAIIQKNPDSMNFNVMALSKK 696
           DG KSQP SHGPSSP +LL+DAA+VIKA I +NP+SMNFNVMALSKK
Sbjct: 183 DGRKSQPTSHGPSSPETLLQDAAKVIKARIAENPNSMNFNVMALSKK 229


>ref|XP_004147225.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3-like
           [Cucumis sativus] gi|449514686|ref|XP_004164450.1|
           PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme
           L3-like [Cucumis sativus]
          Length = 242

 Score =  326 bits (835), Expect = 6e-87
 Identities = 160/227 (70%), Positives = 187/227 (82%), Gaps = 3/227 (1%)
 Frame = +1

Query: 25  AASRSKRWLPLEANPDVMNQFVWGLGVPEDEVEFNDVYGLDDELLDMVPKPVLAVLFLFP 204
           ++S  KRWLPLEANPDVMNQF+WGLG+PEDE E  DVYGLDDELLDMVPKPVLAVLFL+P
Sbjct: 9   SSSAHKRWLPLEANPDVMNQFLWGLGLPEDEAECGDVYGLDDELLDMVPKPVLAVLFLYP 68

Query: 205 YNEAKEEI---QGSGGQKEPSKQVYFLKQTVDNACGTIGVLHALGNATSKINLVEGSYFD 375
             E  EE    Q    +K+ S QVYF+KQTV NACGTIG+LHA+GN TS+I L EGS+ D
Sbjct: 69  ITEKSEEERRQQEKEAKKDYSNQVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLD 128

Query: 376 RFFKSTSNMDPFERAAFLEADREMEDAHSVAASAGDTEANPNVEEHYICFTCVDGELYEL 555
           RFFKST +MDP ERAAFLE D EME AHSVAA+AGDT A   V+ H+ICF+CVDG+LYEL
Sbjct: 129 RFFKSTKSMDPIERAAFLEKDDEMEVAHSVAATAGDTTAPEKVDTHFICFSCVDGKLYEL 188

Query: 556 DGVKSQPISHGPSSPTSLLKDAAEVIKAIIQKNPDSMNFNVMALSKK 696
           DG K++PISHGPSSP SLL+DAA VIK +I  NP+S+NFNV+A+SK+
Sbjct: 189 DGRKTEPISHGPSSPNSLLQDAARVIKDMISDNPESLNFNVIAISKR 235


>emb|CAC39056.1| putative protein [Oryza sativa]
          Length = 227

 Score =  325 bits (833), Expect = 1e-86
 Identities = 162/225 (72%), Positives = 185/225 (82%), Gaps = 7/225 (3%)
 Frame = +1

Query: 40  KRWLPLEANPDVMNQFVWGLGVPEDEVEFNDVYGLDDELLDMVPKPVLAVLFLFPYNEAK 219
           KRW+PLEANPDVMNQF+WGLGV E E +F DVYGLDDELL MVP+PVLAVLFL+P     
Sbjct: 3   KRWIPLEANPDVMNQFMWGLGVAEGEAQFCDVYGLDDELLAMVPQPVLAVLFLYPLTSLD 62

Query: 220 EEIQGSG-------GQKEPSKQVYFLKQTVDNACGTIGVLHALGNATSKINLVEGSYFDR 378
           ++ + SG       G K+ SK+VYF KQTV NACGT+GV+HA+GNA SK+ LVEGSYFDR
Sbjct: 63  DDEEESGAAATSTAGDKDLSKRVYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDR 122

Query: 379 FFKSTSNMDPFERAAFLEADREMEDAHSVAASAGDTEANPNVEEHYICFTCVDGELYELD 558
           F+K T +MDP  RAAFLE D EMEDAHSVAASAGDT+AN  V EH++CF+CVDGELYELD
Sbjct: 123 FYKQTVDMDP--RAAFLEEDDEMEDAHSVAASAGDTDANVEVNEHFVCFSCVDGELYELD 180

Query: 559 GVKSQPISHGPSSPTSLLKDAAEVIKAIIQKNPDSMNFNVMALSK 693
           G KSQPI HGPSSP +LL+DAA+VIKA I  NPDSMNFNVMALSK
Sbjct: 181 GRKSQPICHGPSSPDTLLQDAAKVIKARIASNPDSMNFNVMALSK 225


Top