BLASTX nr result

ID: Dioscorea21_contig00001323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001323
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524809.1| elongation factor tu, putative [Ricinus comm...   714   0.0  
ref|XP_003554238.1| PREDICTED: elongation factor Tu, mitochondri...   706   0.0  
ref|XP_003562281.1| PREDICTED: elongation factor Tu, mitochondri...   705   0.0  
ref|NP_001051912.1| Os03g0851100 [Oryza sativa Japonica Group] g...   705   0.0  
ref|XP_002463510.1| hypothetical protein SORBIDRAFT_01g001080 [S...   700   0.0  

>ref|XP_002524809.1| elongation factor tu, putative [Ricinus communis]
            gi|223535993|gb|EEF37652.1| elongation factor tu,
            putative [Ricinus communis]
          Length = 449

 Score =  714 bits (1844), Expect = 0.0
 Identities = 360/394 (91%), Positives = 368/394 (93%)
 Frame = +1

Query: 1    TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKARGITIA 180
            TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEK RGITIA
Sbjct: 56   TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIA 115

Query: 181  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 360
            TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR
Sbjct: 116  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 175

Query: 361  QVGVPSLVCFLNKVDAVDDPXXXXXXXXXXXXXXSFYKFPGDEIPIIRGSALSALQGTNE 540
            QVGVPSLVCFLNK DAVDDP              SFYKFPGDEIPIIRGSALSALQGTNE
Sbjct: 176  QVGVPSLVCFLNKCDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNE 235

Query: 541  EMGRKSILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEE 720
            E+G+K+ILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGRVEQGTIK GEE
Sbjct: 236  ELGKKAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEE 295

Query: 721  VEVLGLMQTGALKTTVTGVEMFKKILDHGQAGDNVGLLLRGLKRGDVQRGQVICKPGTVK 900
            VE+LGLMQ   LKTTVTGVEMFKKILD GQAGDNVGLLLRGLKR DVQRGQVI KPG+VK
Sbjct: 296  VEILGLMQGAPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGSVK 355

Query: 901  TYKKFEAEIYVLTKDEGGRHTAFFSNYSPQFYLRTADVTGKVELPESVKMVMPGDNVTAI 1080
            TYKKFEAEIYVLTKDEGGRHTAFFSNY PQFY+RTAD+TGKVELPE+VKMVMPGDNVTA 
Sbjct: 356  TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAT 415

Query: 1081 FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 1182
            FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS
Sbjct: 416  FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 449


>ref|XP_003554238.1| PREDICTED: elongation factor Tu, mitochondrial-like [Glycine max]
          Length = 452

 Score =  706 bits (1821), Expect = 0.0
 Identities = 356/394 (90%), Positives = 367/394 (93%)
 Frame = +1

Query: 1    TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKARGITIA 180
            TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLA+EGKAKAVAFDEIDKAPEEK RGITIA
Sbjct: 59   TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAVAFDEIDKAPEEKKRGITIA 118

Query: 181  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 360
            TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR
Sbjct: 119  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 178

Query: 361  QVGVPSLVCFLNKVDAVDDPXXXXXXXXXXXXXXSFYKFPGDEIPIIRGSALSALQGTNE 540
            QVGVPSLVCFLNKVDAVDDP              SFYKFPGDEIPIIRGSALSALQGTN+
Sbjct: 179  QVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTND 238

Query: 541  EMGRKSILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEE 720
            E+GR++ILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGRVEQG IK G+E
Sbjct: 239  EIGRQAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGDE 298

Query: 721  VEVLGLMQTGALKTTVTGVEMFKKILDHGQAGDNVGLLLRGLKRGDVQRGQVICKPGTVK 900
            VEVLGLMQ G LKTTVTGVEMFKKILD GQAGDNVGLLLRGLKR D+QRGQVI KPG+VK
Sbjct: 299  VEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSVK 358

Query: 901  TYKKFEAEIYVLTKDEGGRHTAFFSNYSPQFYLRTADVTGKVELPESVKMVMPGDNVTAI 1080
            T KKFEAEIYVLTKDEGGRHTAFFSNY PQFYLRTADVTGKVELPE+VKMVMPGDNVTA+
Sbjct: 359  TSKKFEAEIYVLTKDEGGRHTAFFSNYKPQFYLRTADVTGKVELPENVKMVMPGDNVTAV 418

Query: 1081 FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 1182
            FELI  VPLEAGQRFALREGGRTVGAGVVSKV+S
Sbjct: 419  FELISAVPLEAGQRFALREGGRTVGAGVVSKVLS 452


>ref|XP_003562281.1| PREDICTED: elongation factor Tu, mitochondrial-like [Brachypodium
            distachyon]
          Length = 455

 Score =  705 bits (1820), Expect = 0.0
 Identities = 350/394 (88%), Positives = 369/394 (93%)
 Frame = +1

Query: 1    TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKARGITIA 180
            TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAE G AKAVAFDEIDKAPEEKARGITI+
Sbjct: 61   TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGSAKAVAFDEIDKAPEEKARGITIS 120

Query: 181  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 360
            TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR
Sbjct: 121  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 180

Query: 361  QVGVPSLVCFLNKVDAVDDPXXXXXXXXXXXXXXSFYKFPGDEIPIIRGSALSALQGTNE 540
            QVGVPSLVCFLNKVDAVDDP              SFYKFPGD+IPIIRGSALSALQGTN+
Sbjct: 181  QVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTND 240

Query: 541  EMGRKSILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEE 720
            E+G+ +ILKLMDAVDEYIPDPVR LDK FLMPIEDVFSIQGRGTVVTGRVEQGTIKTGE+
Sbjct: 241  EIGKNAILKLMDAVDEYIPDPVRVLDKHFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGED 300

Query: 721  VEVLGLMQTGALKTTVTGVEMFKKILDHGQAGDNVGLLLRGLKRGDVQRGQVICKPGTVK 900
            VE+LGL +TG LKTTVTGVEMFKKIL+HG+AGDNVGLLLRGLKRGDVQRGQV+CKPG+VK
Sbjct: 301  VEILGLSETGPLKTTVTGVEMFKKILNHGEAGDNVGLLLRGLKRGDVQRGQVVCKPGSVK 360

Query: 901  TYKKFEAEIYVLTKDEGGRHTAFFSNYSPQFYLRTADVTGKVELPESVKMVMPGDNVTAI 1080
            TYKKFEAEIYVLTKDEGGRHTAFFSNY PQFY RTAD+TGKVELP++VKMVMPGDNVTAI
Sbjct: 361  TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYFRTADITGKVELPQNVKMVMPGDNVTAI 420

Query: 1081 FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 1182
            FELI PVPLE GQRFALREGGRTVGAGV++KV+S
Sbjct: 421  FELISPVPLEPGQRFALREGGRTVGAGVIAKVMS 454


>ref|NP_001051912.1| Os03g0851100 [Oryza sativa Japonica Group]
            gi|18001149|gb|AAL55261.1|AF327062_1 translational
            elongation factor Tu [Oryza sativa]
            gi|21685576|gb|AAM74563.1|AF303468_1 elongation factor Tu
            [Oryza sativa] gi|27573344|gb|AAO20062.1| translational
            elongation factor Tu [Oryza sativa Japonica Group]
            gi|108712131|gb|ABF99926.1| Elongation factor Tu,
            mitochondrial precursor, putative, expressed [Oryza
            sativa Japonica Group] gi|113550383|dbj|BAF13826.1|
            Os03g0851100 [Oryza sativa Japonica Group]
            gi|125546467|gb|EAY92606.1| hypothetical protein
            OsI_14349 [Oryza sativa Indica Group]
            gi|125588659|gb|EAZ29323.1| hypothetical protein
            OsJ_13388 [Oryza sativa Japonica Group]
            gi|215717010|dbj|BAG95373.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 453

 Score =  705 bits (1819), Expect = 0.0
 Identities = 354/394 (89%), Positives = 366/394 (92%)
 Frame = +1

Query: 1    TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKARGITIA 180
            TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAE GKAKAVAFDEIDKAPEEKARGITIA
Sbjct: 60   TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIA 119

Query: 181  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 360
            TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR
Sbjct: 120  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 179

Query: 361  QVGVPSLVCFLNKVDAVDDPXXXXXXXXXXXXXXSFYKFPGDEIPIIRGSALSALQGTNE 540
            QVGVPSLVCFLNKVDAVDDP              SFYKFPGDEIPIIRGSALSALQGTN+
Sbjct: 180  QVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTND 239

Query: 541  EMGRKSILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEE 720
            E+G+ +ILKLMDAVDEYIPDPVRQLDK FLMPIEDVFSIQGRGTVVTGRVEQGTIKTGE+
Sbjct: 240  EIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGED 299

Query: 721  VEVLGLMQTGALKTTVTGVEMFKKILDHGQAGDNVGLLLRGLKRGDVQRGQVICKPGTVK 900
            VE+LGL  +G LKTTVTGVEMFKKILDHG+AGDNVGLLLRGLKRGDVQRGQV+CKPGTVK
Sbjct: 300  VEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVVCKPGTVK 359

Query: 901  TYKKFEAEIYVLTKDEGGRHTAFFSNYSPQFYLRTADVTGKVELPESVKMVMPGDNVTAI 1080
            TY+KFEAEIYVLTKDEGGRHTAF SNYSPQFY RTADVTGKV LP+ V+MVMPGDNVTA 
Sbjct: 360  TYQKFEAEIYVLTKDEGGRHTAFLSNYSPQFYFRTADVTGKVVLPDGVEMVMPGDNVTAG 419

Query: 1081 FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 1182
            FELI PVPLE GQRFALREGGRTVGAGVVSKV S
Sbjct: 420  FELISPVPLEPGQRFALREGGRTVGAGVVSKVYS 453


>ref|XP_002463510.1| hypothetical protein SORBIDRAFT_01g001080 [Sorghum bicolor]
            gi|241917364|gb|EER90508.1| hypothetical protein
            SORBIDRAFT_01g001080 [Sorghum bicolor]
          Length = 453

 Score =  700 bits (1806), Expect = 0.0
 Identities = 350/394 (88%), Positives = 365/394 (92%)
 Frame = +1

Query: 1    TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKARGITIA 180
            TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAE GKAKAVAFDEIDKAPEEKARGITIA
Sbjct: 60   TFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIA 119

Query: 181  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 360
            TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR
Sbjct: 120  TAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLAR 179

Query: 361  QVGVPSLVCFLNKVDAVDDPXXXXXXXXXXXXXXSFYKFPGDEIPIIRGSALSALQGTNE 540
            QVGVPSLVCFLNKVDAVDDP              +FYKFPGDEIPIIRGSALSALQG N+
Sbjct: 180  QVGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDEIPIIRGSALSALQGNND 239

Query: 541  EMGRKSILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEE 720
            E+G+ +ILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGE+
Sbjct: 240  EIGKNAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGED 299

Query: 721  VEVLGLMQTGALKTTVTGVEMFKKILDHGQAGDNVGLLLRGLKRGDVQRGQVICKPGTVK 900
            VE+LGL Q+G LKTTVTGVEMFKKILDHG+AGDNVGLLLRGLKRGDV+RGQV+CKPG++K
Sbjct: 300  VEILGLTQSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVERGQVVCKPGSLK 359

Query: 901  TYKKFEAEIYVLTKDEGGRHTAFFSNYSPQFYLRTADVTGKVELPESVKMVMPGDNVTAI 1080
            TYKKFEAEIYVLTKDEGGRHT F +NYSPQFY RTADVTGKVEL    KMV+PGDNVTA 
Sbjct: 360  TYKKFEAEIYVLTKDEGGRHTHFMTNYSPQFYFRTADVTGKVELLGETKMVLPGDNVTAN 419

Query: 1081 FELILPVPLEAGQRFALREGGRTVGAGVVSKVIS 1182
            FELI PVPLE GQRFALREGGRTVGAGVVSKVIS
Sbjct: 420  FELISPVPLEPGQRFALREGGRTVGAGVVSKVIS 453


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