BLASTX nr result

ID: Dioscorea21_contig00001306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001306
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326421.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
ref|XP_002519978.1| Protein kinase APK1B, chloroplast precursor,...   112   8e-23
ref|XP_002264739.2| PREDICTED: uncharacterized protein LOC100246...   107   3e-21
emb|CAQ58610.1| Unknown gene [Vitis vinifera] gi|239056196|emb|C...   107   3e-21
ref|XP_002323109.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21

>ref|XP_002326421.1| predicted protein [Populus trichocarpa] gi|222833614|gb|EEE72091.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score =  114 bits (284), Expect = 3e-23
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
 Frame = -3

Query: 493 PMISVEYGPMSNVSMSADNS--RRMLGPFQLCLACRCCSASDPTNCSSMPCCFGIDCNLP 320
           PM   EY  +       D+   RR L PFQLCL C+CC+ +  TNC++MPCCFGIDC LP
Sbjct: 59  PMEPAEYRLIGRKGDDHDDDLWRRRLAPFQLCLLCKCCAGAATTNCATMPCCFGIDCQLP 118

Query: 319 DKPYGVCAFVPKTCNCTSC 263
           +KPYGVCAFVPKTCNCTSC
Sbjct: 119 NKPYGVCAFVPKTCNCTSC 137


>ref|XP_002519978.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus
           communis] gi|223540742|gb|EEF42302.1| Protein kinase
           APK1B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 534

 Score =  112 bits (280), Expect = 8e-23
 Identities = 45/57 (78%), Positives = 49/57 (85%)
 Frame = -3

Query: 433 RRMLGPFQLCLACRCCSASDPTNCSSMPCCFGIDCNLPDKPYGVCAFVPKTCNCTSC 263
           RR L PFQLCL C+CC+A   T CS+MPCCFGIDC LP+KPYGVCAFVPKTCNCTSC
Sbjct: 476 RRRLAPFQLCLLCKCCAAPAATTCSTMPCCFGIDCQLPNKPYGVCAFVPKTCNCTSC 532


>ref|XP_002264739.2| PREDICTED: uncharacterized protein LOC100246776 [Vitis vinifera]
          Length = 118

 Score =  107 bits (267), Expect = 3e-21
 Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 4/63 (6%)
 Frame = -3

Query: 439 NSRRMLGPFQLCLACRCCSA--SDPTN--CSSMPCCFGIDCNLPDKPYGVCAFVPKTCNC 272
           + RR L PFQLCL C+CC+A  +DPT   C++MPCCFGIDC LP+KP+GVCAFVPKTCNC
Sbjct: 54  DGRRKLAPFQLCLVCKCCAAGGADPTTGTCATMPCCFGIDCQLPNKPFGVCAFVPKTCNC 113

Query: 271 TSC 263
           TSC
Sbjct: 114 TSC 116


>emb|CAQ58610.1| Unknown gene [Vitis vinifera] gi|239056196|emb|CAQ58634.1| unknown
           gene [Vitis vinifera]
          Length = 89

 Score =  107 bits (267), Expect = 3e-21
 Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 4/63 (6%)
 Frame = -3

Query: 439 NSRRMLGPFQLCLACRCCSA--SDPTN--CSSMPCCFGIDCNLPDKPYGVCAFVPKTCNC 272
           + RR L PFQLCL C+CC+A  +DPT   C++MPCCFGIDC LP+KP+GVCAFVPKTCNC
Sbjct: 25  DGRRKLAPFQLCLVCKCCAAGGADPTTGTCATMPCCFGIDCQLPNKPFGVCAFVPKTCNC 84

Query: 271 TSC 263
           TSC
Sbjct: 85  TSC 87


>ref|XP_002323109.1| predicted protein [Populus trichocarpa] gi|222867739|gb|EEF04870.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score =  107 bits (267), Expect = 3e-21
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -3

Query: 433 RRMLGPFQLCLACRCCSASDPTNCSSMPCCFGIDCNLPDKPYGVCAFVPKTCNCTSC 263
           RR L PFQLCL C+CC+ +  T C++M CCFGIDC LP+KPYGVCAFVPKTCNCTSC
Sbjct: 19  RRRLAPFQLCLLCKCCAGAATTTCATMSCCFGIDCRLPNKPYGVCAFVPKTCNCTSC 75


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