BLASTX nr result

ID: Dioscorea21_contig00001247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001247
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [V...   100   6e-19
ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycoper...    91   5e-16
ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [C...    88   3e-15
ref|NP_001233810.1| TCP transcription factor 15 [Solanum lycoper...    87   7e-15
ref|NP_001173218.1| Os02g0828566 [Oryza sativa Japonica Group] g...    82   2e-13

>ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [Vitis vinifera]
          Length = 255

 Score =  100 bits (248), Expect = 6e-19
 Identities = 64/129 (49%), Positives = 73/129 (56%), Gaps = 22/129 (17%)
 Frame = +3

Query: 111 FILGKRLRSDDE----DKDDAVAQAGMSA-----FWAVPTRPDFAQMWGFAAAAGGA--E 257
           FILGKRLR DD+     KD+ VA A  +A     FWAVP RPDF Q+W FAAAA  A  E
Sbjct: 133 FILGKRLRGDDDVDGGAKDEVVAAAAAAAAAAGGFWAVPARPDFGQVWSFAAAAAAAPPE 192

Query: 258 IVVPP-----------RFPSGPVGEASAARVGNYLPMAQGHLNXXXXXXXXXXXXXXXXX 404
           +VV             RF   P+GEASAARVGNYLP+AQGHLN                 
Sbjct: 193 MVVQAPTMASQPTISGRFMQQPMGEASAARVGNYLPIAQGHLN------LLASLSGAPAS 246

Query: 405 XGRREDEPR 431
            GRR+D+PR
Sbjct: 247 SGRRDDDPR 255


>ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycopersicum]
           gi|306416839|gb|ADM87263.1| TCP transcription factor 14
           [Solanum lycopersicum]
          Length = 266

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 59/110 (53%), Positives = 65/110 (59%), Gaps = 29/110 (26%)
 Frame = +3

Query: 111 FILGKRLRSDDED-----KDD-AVAQAGMSA------FWAVPTRPDFAQMWGFAAAAGGA 254
           FILGKRLRSDDE+     KDD AVA  G +A      FWAVP RPDF Q+W FAAA    
Sbjct: 137 FILGKRLRSDDENIENGNKDDVAVAAGGATAVGPTAGFWAVPARPDFGQIWSFAAAPP-P 195

Query: 255 EIVVPP-----------------RFPSGPVGEASAARVGNYLPMAQGHLN 353
           E++VP                  RF    +GEASAARVGNYLPM QGHLN
Sbjct: 196 EMMVPTSAAAAAAAAAALSSQSSRFFQQQMGEASAARVGNYLPMTQGHLN 245


>ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [Cucumis sativus]
           gi|449528835|ref|XP_004171408.1| PREDICTED:
           transcription factor TCP7-like [Cucumis sativus]
          Length = 256

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 55/126 (43%), Positives = 64/126 (50%), Gaps = 19/126 (15%)
 Frame = +3

Query: 111 FILGKRLRSDDEDKDDA----------VAQAGMSAFWAVPTRPDFAQMWGFAAAAGGAEI 260
           FILGKR+RSDD+ KDDA          V   G   +WA+P RPD+ Q+W FAAAA    +
Sbjct: 141 FILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMV 200

Query: 261 VVPPRF---------PSGPVGEASAARVGNYLPMAQGHLNXXXXXXXXXXXXXXXXXXGR 413
           V P               P+ EASAARVGNYLP   GHLN                  GR
Sbjct: 201 VQPGGIAQQASLFAQQQQPIREASAARVGNYLP---GHLN-------LLASLSGGGGSGR 250

Query: 414 REDEPR 431
           RED+PR
Sbjct: 251 REDDPR 256


>ref|NP_001233810.1| TCP transcription factor 15 [Solanum lycopersicum]
           gi|306416841|gb|ADM87264.1| TCP transcription factor 15
           [Solanum lycopersicum]
          Length = 249

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 49/92 (53%), Positives = 56/92 (60%), Gaps = 11/92 (11%)
 Frame = +3

Query: 111 FILGKRLRSDDEDKD----DAVAQAGMSAFWAVPTRPDFAQMWGFAA-------AAGGAE 257
           F+LGKRLRS+D+D      D V  AG   FWAVP RPDF Q+W FAA       +A  A 
Sbjct: 142 FLLGKRLRSEDDDNGSGDKDVVPSAG---FWAVPARPDFGQVWSFAAPSPEISHSAAAAM 198

Query: 258 IVVPPRFPSGPVGEASAARVGNYLPMAQGHLN 353
              P RF    + EASA RVGNY P+AQGHLN
Sbjct: 199 NTQPSRFLQQQMEEASAGRVGNYFPIAQGHLN 230


>ref|NP_001173218.1| Os02g0828566 [Oryza sativa Japonica Group]
           gi|48716463|dbj|BAD23070.1| transcription factor
           PCF3-like [Oryza sativa Japonica Group]
           gi|255671377|dbj|BAH91947.1| Os02g0828566 [Oryza sativa
           Japonica Group]
          Length = 236

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/109 (45%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
 Frame = +3

Query: 111 FILGKRLRSDDEDKDDAV----AQAGMSAFWAVPTRPDFAQMWGFAAAAGGAEIVVPPRF 278
           FILGKRLR+ D+          A A   AFWA+P R DF Q+W FAAA    E++V    
Sbjct: 128 FILGKRLRAADDHTTSPAPAPDATAPTQAFWALPARADFGQLWSFAAAP---EMMVAAAA 184

Query: 279 PSGPVGEASAARVGNYLPMAQGHLNXXXXXXXXXXXXXXXXXXGRREDE 425
                GEASAARVGNYLPMAQG+LN                  GR E+E
Sbjct: 185 APAMPGEASAARVGNYLPMAQGNLNLLASFSGGPGGAGATAATGRPEEE 233


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