BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001241
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550.1|RBS_ZANAE RecName: Full=Ribulose bisphosphate carbox...   152   1e-34
gb|AAB70543.1| ribulose 1,5-bisphosphate carboxylase small subun...   147   3e-33
gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   147   3e-33
ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group] g...   147   4e-33
ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group] g...   147   4e-33

>sp|O48550.1|RBS_ZANAE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|2665670|gb|AAC18406.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Zantedeschia aethiopica]
          Length = 178

 Score =  152 bits (383), Expect = 1e-34
 Identities = 63/86 (73%), Positives = 75/86 (87%)
 Frame = -2

Query: 917 ETLSYLPHLTDDQLIKQFDYLLRSGWVPCIEFCRIGFVYREHHRSPGYYDGRYWTMWKLP 738
           ETLSYLP LT +QL ++ DYL+R+GW+PCIEFC++GFVYRE+H SPGYYDGRYWTMWKLP
Sbjct: 69  ETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLP 128

Query: 737 MFGCTDATQVLKEVRNCENEHPDKFN 660
           MFGCTD++QVLKEV  C   +PD FN
Sbjct: 129 MFGCTDSSQVLKEVDECSKAYPDYFN 154


>gb|AAB70543.1| ribulose 1,5-bisphosphate carboxylase small subunit [Oryza sativa
           Indica Group]
          Length = 175

 Score =  147 bits (371), Expect = 3e-33
 Identities = 63/85 (74%), Positives = 74/85 (87%)
 Frame = -2

Query: 917 ETLSYLPHLTDDQLIKQFDYLLRSGWVPCIEFCRIGFVYREHHRSPGYYDGRYWTMWKLP 738
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF ++GFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 60  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119

Query: 737 MFGCTDATQVLKEVRNCENEHPDKF 663
           MFGCTDATQVLKE+ + +  +PD F
Sbjct: 120 MFGCTDATQVLKELEDAKKAYPDAF 144


>gb|ABA46879.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Musa balbisiana]
          Length = 161

 Score =  147 bits (371), Expect = 3e-33
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = -2

Query: 917 ETLSYLPHLTDDQLIKQFDYLLRSGWVPCIEFCRIGFVYREHHRSPGYYDGRYWTMWKLP 738
           ETLSYLP L D+ L+KQ +YLLRS W+PC+EFC  GFV+RE+HRSPGYYDGRYWTMWKLP
Sbjct: 69  ETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLP 128

Query: 737 MFGCTDATQVLKEVRNCENEHPDKF 663
           MFGCTDA QV KE+  C+ E+PD F
Sbjct: 129 MFGCTDAVQVAKELEECKKEYPDAF 153


>ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group]
           gi|77554383|gb|ABA97179.1| Ribulose bisphosphate
           carboxylase small chain C, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|77554384|gb|ABA97180.1| Ribulose bisphosphate
           carboxylase small chain C, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649114|dbj|BAF29626.1| Os12g0292400 [Oryza sativa
           Japonica Group] gi|125579070|gb|EAZ20216.1| hypothetical
           protein OsJ_35820 [Oryza sativa Japonica Group]
           gi|149390921|gb|ABR25478.1| ribulose bisphosphate
           carboxylase small chain c [Oryza sativa Indica Group]
           gi|215687018|dbj|BAG90832.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215687290|dbj|BAG91855.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score =  147 bits (370), Expect = 4e-33
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -2

Query: 917 ETLSYLPHLTDDQLIKQFDYLLRSGWVPCIEFCRIGFVYREHHRSPGYYDGRYWTMWKLP 738
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF ++GFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 60  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119

Query: 737 MFGCTDATQVLKEVRNCENEHPDKF 663
           MFGCTDATQVLKE+   +  +PD F
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAF 144


>ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group]
           gi|77554377|gb|ABA97173.1| Ribulose bisphosphate
           carboxylase small chain A, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|108862507|gb|ABG21973.1| Ribulose bisphosphate
           carboxylase small chain A, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649113|dbj|BAF29625.1| Os12g0291400 [Oryza sativa
           Japonica Group] gi|125579068|gb|EAZ20214.1| hypothetical
           protein OsJ_35814 [Oryza sativa Japonica Group]
           gi|215704569|dbj|BAG94202.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score =  147 bits (370), Expect = 4e-33
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -2

Query: 917 ETLSYLPHLTDDQLIKQFDYLLRSGWVPCIEFCRIGFVYREHHRSPGYYDGRYWTMWKLP 738
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF ++GFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 60  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119

Query: 737 MFGCTDATQVLKEVRNCENEHPDKF 663
           MFGCTDATQVLKE+   +  +PD F
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAF 144