BLASTX nr result

ID: Dioscorea21_contig00001240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001240
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   587   e-165
dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare]    584   e-164
ref|XP_002468475.1| hypothetical protein SORBIDRAFT_01g046570 [S...   580   e-163
ref|NP_001132088.1| uncharacterized protein LOC100193503 [Zea ma...   576   e-162
gb|ACG43686.1| ATP-dependent RNA helicase DBP5 [Zea mays]             575   e-161

>ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Brachypodium
            distachyon]
          Length = 508

 Score =  587 bits (1512), Expect = e-165
 Identities = 297/459 (64%), Positives = 366/459 (79%), Gaps = 9/459 (1%)
 Frame = -1

Query: 1374 KKIEELSIT--------EKSRTLDDPEDSEIKAVTSGNTVYEAAVKFEDLNLSQDLIKGL 1219
            K+IE LS++        +    LDD +DS+I+AVTSG TVYE+A  FEDL L+ +L+KGL
Sbjct: 59   KQIEALSLSVPEDDGGQQGPPLLDDSDDSQIQAVTSGGTVYESATTFEDLKLTPELLKGL 118

Query: 1218 YVEMGFTRPSKIQAVSLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPTKEGPQAM 1039
            + EMGFTRPSKIQA++LPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDP ++ PQA+
Sbjct: 119  HDEMGFTRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPNRKIPQAI 178

Query: 1038 CICPTRELAQQNQAVLMRMGKYSGITSMCAIPSESAGYIPVYKRPEVKEHVVIGTPGTIK 859
            CICPTRELAQQN++VLMRMGK++GIT  CAIP     Y+P+ + P + + VVIGT GT+ 
Sbjct: 179  CICPTRELAQQNKSVLMRMGKFTGITCACAIPPAQKDYMPISRMPAITDQVVIGTSGTLM 238

Query: 858  KLMTGRKLKTGNIKILVFDEADHMLAEGGFKDDSERIMKDIRKESGGCQVLLFSATFNET 679
            K +T +KL T  IKILVFDEADHMLAE GF+ DSERIM+DI++ +GGCQVLLFSATFNE 
Sbjct: 239  KWITNKKLATREIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNER 298

Query: 678  VKAFVSNVVRDGNQIFVKKEDLTLEKVKQYKVKCYRDRERPDERLKIEVIK-KILEYGQK 502
            VK FV+ V++DGNQIFVKKEDLTLEKVKQYKV+       PDE  KIEVI+ KI E+GQK
Sbjct: 299  VKDFVTKVIKDGNQIFVKKEDLTLEKVKQYKVRV------PDEAAKIEVIRDKIFEFGQK 352

Query: 501  VGQTIIFVRTKESARNLHKQLSSEGYECTSIQGALVIEDRDKIIKEFKDGLTQVLITTDL 322
            VGQ IIFVRTK S +N+H  L+ E Y C+SIQG+L   +R+K+I+EFKDG T+VLI+TD+
Sbjct: 353  VGQVIIFVRTKISTKNVHNALTKEDYVCSSIQGSLDQSEREKVIQEFKDGYTKVLISTDV 412

Query: 321  LARGFDQAQVNLVVNHDLPVNYESYRRGSPEPDCEVYLHRVGRTGRFGRKGAVFNLLGSR 142
            LARGFDQAQVNLV+N+D+P+ Y +      EPD EVYLHR+GR GRFGRKGAVFNLL   
Sbjct: 413  LARGFDQAQVNLVINYDMPIKYNT----RDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGD 468

Query: 141  DDEALLEMIENHFQHKIPMVDNGQNDDSIVNAIKDAGLL 25
             D+ ++  IEN+FQHK+P V N +++++   A+KDAGLL
Sbjct: 469  TDDNVMTKIENYFQHKVPEVPNWKSEENFETALKDAGLL 507


>dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 506

 Score =  584 bits (1506), Expect = e-164
 Identities = 298/459 (64%), Positives = 365/459 (79%), Gaps = 9/459 (1%)
 Frame = -1

Query: 1374 KKIEELSIT--------EKSRTLDDPEDSEIKAVTSGNTVYEAAVKFEDLNLSQDLIKGL 1219
            K+IE LS++        +    LDD +DS+I+AVTSG TVYE+A  FED+ L+ +L+KGL
Sbjct: 57   KQIEALSLSVPEDDGGPDGPPLLDDSDDSQIQAVTSGGTVYESATTFEDVKLTPELLKGL 116

Query: 1218 YVEMGFTRPSKIQAVSLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPTKEGPQAM 1039
            + EMGF+RPSKIQA++LPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDP ++ PQA+
Sbjct: 117  HDEMGFSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPNRKVPQAI 176

Query: 1038 CICPTRELAQQNQAVLMRMGKYSGITSMCAIPSESAGYIPVYKRPEVKEHVVIGTPGTIK 859
            CICPTRELAQQN++VLMRMGK++GIT  CAIPS    Y+P+ K   V + VVIGT GT+ 
Sbjct: 177  CICPTRELAQQNKSVLMRMGKFTGITCACAIPSSQKEYMPISKMAPVTDQVVIGTSGTLT 236

Query: 858  KLMTGRKLKTGNIKILVFDEADHMLAEGGFKDDSERIMKDIRKESGGCQVLLFSATFNET 679
            K +T +KL T  IKILVFDEADHMLAE GFK DS RIMKDI+  +GGCQVLLFSATFNE 
Sbjct: 237  KWITHKKLATREIKILVFDEADHMLAEEGFKTDSLRIMKDIQNSAGGCQVLLFSATFNEK 296

Query: 678  VKAFVSNVVRDGNQIFVKKEDLTLEKVKQYKVKCYRDRERPDERLKIEVIK-KILEYGQK 502
            VK FV+ V++DGNQIFVKKEDLTLEKVKQYKV+       PDE  KIEVI+ KI E+GQK
Sbjct: 297  VKEFVTRVIKDGNQIFVKKEDLTLEKVKQYKVRV------PDEAAKIEVIRDKIFEFGQK 350

Query: 501  VGQTIIFVRTKESARNLHKQLSSEGYECTSIQGALVIEDRDKIIKEFKDGLTQVLITTDL 322
            VGQ IIFVRT+ S +N+H  L+ E Y C+SIQG+L   +R+K+I+EFKDG T+VLI+TD+
Sbjct: 351  VGQVIIFVRTRNSTKNVHNALTKEDYVCSSIQGSLDQAEREKVIQEFKDGYTKVLISTDV 410

Query: 321  LARGFDQAQVNLVVNHDLPVNYESYRRGSPEPDCEVYLHRVGRTGRFGRKGAVFNLLGSR 142
            LARGFDQAQVNLV+N+D+P+ Y +      EPD EVYLHR+GR GRFGRKGAVFNLL  +
Sbjct: 411  LARGFDQAQVNLVINYDMPIKYNT----RDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGQ 466

Query: 141  DDEALLEMIENHFQHKIPMVDNGQNDDSIVNAIKDAGLL 25
             DE ++  IE++FQHK+P V N +++D+   A+KDAGLL
Sbjct: 467  TDEVVMTKIEDYFQHKVPEVPNWKSEDNFETALKDAGLL 505


>ref|XP_002468475.1| hypothetical protein SORBIDRAFT_01g046570 [Sorghum bicolor]
            gi|241922329|gb|EER95473.1| hypothetical protein
            SORBIDRAFT_01g046570 [Sorghum bicolor]
          Length = 499

 Score =  580 bits (1496), Expect = e-163
 Identities = 293/449 (65%), Positives = 360/449 (80%), Gaps = 1/449 (0%)
 Frame = -1

Query: 1368 IEELSITEKSRTLDDPEDSEIKAVTSGNTVYEAAVKFEDLNLSQDLIKGLYVEMGFTRPS 1189
            +E+ +  E    LDD +DS+I+AVTSG TVYE+A  FEDL LS +L+KGL+ EMGF+RPS
Sbjct: 61   VEDAAGEEGPPLLDDSDDSQIQAVTSGGTVYESATTFEDLKLSPELLKGLHDEMGFSRPS 120

Query: 1188 KIQAVSLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPTKEGPQAMCICPTRELAQ 1009
            KIQA++LPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDP +  PQA+CICPTRELAQ
Sbjct: 121  KIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQRRIPQAICICPTRELAQ 180

Query: 1008 QNQAVLMRMGKYSGITSMCAIPSESAGYIPVYKRPEVKEHVVIGTPGTIKKLMTGRKLKT 829
            QN+AVLMRMGK++GIT  CAIP     Y+P+ K   + + +VIGT GT+ K +T +KL T
Sbjct: 181  QNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTLIKWITHKKLAT 240

Query: 828  GNIKILVFDEADHMLAEGGFKDDSERIMKDIRKESGGCQVLLFSATFNETVKAFVSNVVR 649
             +IKILVFDEADHMLAE GF+ DSERIM+DI++ +GGCQVLLFSATFNE VK FV+ V+R
Sbjct: 241  RDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTKVIR 300

Query: 648  DGNQIFVKKEDLTLEKVKQYKVKCYRDRERPDERLKIEVIK-KILEYGQKVGQTIIFVRT 472
            DGNQIFVKKE+LTLEKVKQYKV+       PDE  KIEVI+ KI E+GQKVGQ IIFVRT
Sbjct: 301  DGNQIFVKKEELTLEKVKQYKVQI------PDESAKIEVIRDKIFEFGQKVGQVIIFVRT 354

Query: 471  KESARNLHKQLSSEGYECTSIQGALVIEDRDKIIKEFKDGLTQVLITTDLLARGFDQAQV 292
            K+S +N+H  L+ E Y C+SIQG+L   +R+KII+EFKDG T+VLI+TD+LARGFDQAQV
Sbjct: 355  KQSTKNVHNALTREDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTDVLARGFDQAQV 414

Query: 291  NLVVNHDLPVNYESYRRGSPEPDCEVYLHRVGRTGRFGRKGAVFNLLGSRDDEALLEMIE 112
            NLV+N+D+P+ + +      EPD EVYLHR+GR GRFGRKGAVFNLL  + D  +++ IE
Sbjct: 415  NLVINYDMPIKFGT----RDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGQTDNVVMKKIE 470

Query: 111  NHFQHKIPMVDNGQNDDSIVNAIKDAGLL 25
            ++FQH +P V N Q ++    A+KDAGLL
Sbjct: 471  DYFQHSVPEVRNWQREEDFEAALKDAGLL 499


>ref|NP_001132088.1| uncharacterized protein LOC100193503 [Zea mays]
            gi|195607946|gb|ACG25803.1| ATP-dependent RNA helicase
            DBP5 [Zea mays]
          Length = 504

 Score =  576 bits (1484), Expect = e-162
 Identities = 294/460 (63%), Positives = 363/460 (78%), Gaps = 10/460 (2%)
 Frame = -1

Query: 1374 KKIEELSIT---------EKSRTLDDPEDSEIKAVTSGNTVYEAAVKFEDLNLSQDLIKG 1222
            K+IE LS+          E    LDD +DS+I+AV SG TVYE+A  FEDL LS +L+KG
Sbjct: 55   KQIEALSLAPSVDDAAGEEGPPLLDDSDDSQIQAVISGGTVYESATTFEDLKLSPELLKG 114

Query: 1221 LYVEMGFTRPSKIQAVSLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPTKEGPQA 1042
            L+ EMGF+RPSKIQA++LPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDP ++ PQA
Sbjct: 115  LHDEMGFSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQRKIPQA 174

Query: 1041 MCICPTRELAQQNQAVLMRMGKYSGITSMCAIPSESAGYIPVYKRPEVKEHVVIGTPGTI 862
            +CICPTRELAQQN+AVLMRMGK++GIT  CAIP     Y+P+ K   + + +VIGT GT+
Sbjct: 175  ICICPTRELAQQNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTL 234

Query: 861  KKLMTGRKLKTGNIKILVFDEADHMLAEGGFKDDSERIMKDIRKESGGCQVLLFSATFNE 682
             K +T +KL T +IKILVFDEADHMLAE GF+ DSER+M+DI++ +GGCQVLLFSATFN+
Sbjct: 235  IKWITHKKLATRDIKILVFDEADHMLAEDGFRSDSERMMRDIQRSAGGCQVLLFSATFND 294

Query: 681  TVKAFVSNVVRDGNQIFVKKEDLTLEKVKQYKVKCYRDRERPDERLKIEVIK-KILEYGQ 505
             VK FV+ V+RDGNQIFVKKE+LTLEKVKQYKV+       PDE  KIEVI+ KI E+GQ
Sbjct: 295  RVKDFVTKVIRDGNQIFVKKEELTLEKVKQYKVQV------PDESAKIEVIRDKIFEFGQ 348

Query: 504  KVGQTIIFVRTKESARNLHKQLSSEGYECTSIQGALVIEDRDKIIKEFKDGLTQVLITTD 325
            KVGQ IIFVRTK+S +N+H  L+ E Y C+SIQG+L   +R+KII+EFKDG T+VLI+TD
Sbjct: 349  KVGQVIIFVRTKQSTKNVHNALTREDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTD 408

Query: 324  LLARGFDQAQVNLVVNHDLPVNYESYRRGSPEPDCEVYLHRVGRTGRFGRKGAVFNLLGS 145
            +LARGFDQAQVNLV+N+D+P+ + +      EPD EVYLHR+GR GRFGRKGAVFNLL  
Sbjct: 409  VLARGFDQAQVNLVINYDMPIKFGT----RDEPDYEVYLHRIGRAGRFGRKGAVFNLLCG 464

Query: 144  RDDEALLEMIENHFQHKIPMVDNGQNDDSIVNAIKDAGLL 25
            + D  +++ IE++FQH +P V N Q ++    A+KDAGLL
Sbjct: 465  QTDNVVMKKIEDYFQHSVPEVRNWQREEDFEAALKDAGLL 504


>gb|ACG43686.1| ATP-dependent RNA helicase DBP5 [Zea mays]
          Length = 494

 Score =  575 bits (1481), Expect = e-161
 Identities = 294/460 (63%), Positives = 362/460 (78%), Gaps = 10/460 (2%)
 Frame = -1

Query: 1374 KKIEELSIT---------EKSRTLDDPEDSEIKAVTSGNTVYEAAVKFEDLNLSQDLIKG 1222
            K+IE LS+          E    LDD +DS+I+AV SG TVYE+A  FEDL LS +L+KG
Sbjct: 45   KQIEALSLAPSVDDAAGEEGPPLLDDSDDSQIQAVISGGTVYESATTFEDLKLSPELLKG 104

Query: 1221 LYVEMGFTRPSKIQAVSLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPTKEGPQA 1042
            L+ EMGF+RPSKIQA++LPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDP  + PQA
Sbjct: 105  LHDEMGFSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQHKIPQA 164

Query: 1041 MCICPTRELAQQNQAVLMRMGKYSGITSMCAIPSESAGYIPVYKRPEVKEHVVIGTPGTI 862
            +CICPTRELAQQN+AVLMRMGK++GIT  CAIP     Y+P+ K   + + +VIGT GT+
Sbjct: 165  ICICPTRELAQQNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTL 224

Query: 861  KKLMTGRKLKTGNIKILVFDEADHMLAEGGFKDDSERIMKDIRKESGGCQVLLFSATFNE 682
             K +T +KL T +IKILVFDEADHMLAE GF+ DSER+M+DI++ +GGCQVLLFSATFN+
Sbjct: 225  IKWITHKKLATRDIKILVFDEADHMLAEDGFRSDSERMMRDIQRSAGGCQVLLFSATFND 284

Query: 681  TVKAFVSNVVRDGNQIFVKKEDLTLEKVKQYKVKCYRDRERPDERLKIEVIK-KILEYGQ 505
             VK FV+ V+RDGNQIFVKKE+LTLEKVKQYKV+       PDE  KIEVI+ KI E+GQ
Sbjct: 285  RVKDFVTKVIRDGNQIFVKKEELTLEKVKQYKVQV------PDESAKIEVIRDKIFEFGQ 338

Query: 504  KVGQTIIFVRTKESARNLHKQLSSEGYECTSIQGALVIEDRDKIIKEFKDGLTQVLITTD 325
            KVGQ IIFVRTK+S +N+H  L+ E Y C+SIQG+L   +R+KII+EFKDG T+VLI+TD
Sbjct: 339  KVGQVIIFVRTKQSTKNVHNALTREDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTD 398

Query: 324  LLARGFDQAQVNLVVNHDLPVNYESYRRGSPEPDCEVYLHRVGRTGRFGRKGAVFNLLGS 145
            +LARGFDQAQVNLV+N+D+P+ + +      EPD EVYLHR+GR GRFGRKGAVFNLL  
Sbjct: 399  VLARGFDQAQVNLVINYDMPIKFGT----RDEPDYEVYLHRIGRAGRFGRKGAVFNLLCG 454

Query: 144  RDDEALLEMIENHFQHKIPMVDNGQNDDSIVNAIKDAGLL 25
            + D  +++ IE++FQH +P V N Q ++    A+KDAGLL
Sbjct: 455  QTDNVVMKKIEDYFQHSVPEVRNWQREEDFEAALKDAGLL 494