BLASTX nr result

ID: Dioscorea21_contig00001204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001204
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like is...   369   e-100
ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195...   369   e-100
ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [S...   367   3e-99
emb|CBI19935.3| unnamed protein product [Vitis vinifera]              367   3e-99
ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform...   367   3e-99

>ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
           sativus] gi|449458103|ref|XP_004146787.1| PREDICTED:
           ras-related protein RABC1-like isoform 2 [Cucumis
           sativus] gi|449529576|ref|XP_004171774.1| PREDICTED:
           ras-related protein RABC1-like isoform 1 [Cucumis
           sativus] gi|449529578|ref|XP_004171775.1| PREDICTED:
           ras-related protein RABC1-like isoform 2 [Cucumis
           sativus]
          Length = 213

 Score =  369 bits (948), Expect = e-100
 Identities = 179/194 (92%), Positives = 192/194 (98%)
 Frame = +3

Query: 213 SQPEFDYLFKLLLIGDSGVGKSSLLLRFTSDSFEDLSPTIGVDFKVKMVTMGGKRLKLAI 392
           SQPEFDYLFKLLLIGDSGVGKS+LLLRFTSDSFEDLSPTIGVDFK+K VT+GGK+LKLAI
Sbjct: 8   SQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAI 67

Query: 393 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKMLV 572
           WDTAGQERFRTLT SYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIKMLV
Sbjct: 68  WDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 127

Query: 573 GNKVDKESERVVTKKEGIDFARQYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLAEG 752
           GNKVDKESERVV+KKEGIDFAR+YGCLFLECSAKTRVNVEQCF+ELVLKILDTPSLLA+G
Sbjct: 128 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADG 187

Query: 753 SSGLKKNIFKQKPP 794
           S+GLKKNIFK+KPP
Sbjct: 188 STGLKKNIFKEKPP 201


>ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195625924|gb|ACG34792.1|
           ras-related protein Rab-18 [Zea mays]
           gi|223972897|gb|ACN30636.1| unknown [Zea mays]
           gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea
           mays]
          Length = 215

 Score =  369 bits (948), Expect = e-100
 Identities = 181/193 (93%), Positives = 190/193 (98%)
 Frame = +3

Query: 216 QPEFDYLFKLLLIGDSGVGKSSLLLRFTSDSFEDLSPTIGVDFKVKMVTMGGKRLKLAIW 395
           QPEFDYLFKLLLIGDSGVGKSSLLLRFT+DSFEDLSPTIGVDFKVKMVT+GGK+LKLAIW
Sbjct: 13  QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIW 72

Query: 396 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKMLVG 575
           DTAGQERFRTLTSSYYRGAQGVIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIKMLVG
Sbjct: 73  DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132

Query: 576 NKVDKESERVVTKKEGIDFARQYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLAEGS 755
           NKVDKESER VTKKEGI+FAR+YGCLFLECSAKT+VNVEQCFEELVLKILDTPSLLA+ S
Sbjct: 133 NKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192

Query: 756 SGLKKNIFKQKPP 794
           SG KKNIFKQKPP
Sbjct: 193 SGAKKNIFKQKPP 205


>ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
           gi|241940024|gb|EES13169.1| hypothetical protein
           SORBIDRAFT_06g034200 [Sorghum bicolor]
          Length = 215

 Score =  367 bits (942), Expect = 3e-99
 Identities = 179/193 (92%), Positives = 190/193 (98%)
 Frame = +3

Query: 216 QPEFDYLFKLLLIGDSGVGKSSLLLRFTSDSFEDLSPTIGVDFKVKMVTMGGKRLKLAIW 395
           QPEFDYLFKLLLIGDSGVGKSSLLLRFT+DSFEDLSPTIGVDFKVKMV++GGK+LKLAIW
Sbjct: 13  QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVSIGGKKLKLAIW 72

Query: 396 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKMLVG 575
           DTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIKMLVG
Sbjct: 73  DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132

Query: 576 NKVDKESERVVTKKEGIDFARQYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLAEGS 755
           NKVDKESER VTKKEGI+FAR+YGCLFLECSAKT+VNVEQCFEELVLKILDTPSLLA+ S
Sbjct: 133 NKVDKESERCVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192

Query: 756 SGLKKNIFKQKPP 794
           SG KKNIFKQKPP
Sbjct: 193 SGAKKNIFKQKPP 205


>emb|CBI19935.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  367 bits (941), Expect = 3e-99
 Identities = 180/194 (92%), Positives = 191/194 (98%)
 Frame = +3

Query: 213 SQPEFDYLFKLLLIGDSGVGKSSLLLRFTSDSFEDLSPTIGVDFKVKMVTMGGKRLKLAI 392
           SQPEFDYLFKLLLIGDSGVGKS+LLL FTS++FEDLSPTIGVDFKVK V +GGK+LKLAI
Sbjct: 104 SQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAI 163

Query: 393 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKMLV 572
           WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIKMLV
Sbjct: 164 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 223

Query: 573 GNKVDKESERVVTKKEGIDFARQYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLAEG 752
           GNKVDKESERVVTKKEGIDFAR+YGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLLAEG
Sbjct: 224 GNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEG 283

Query: 753 SSGLKKNIFKQKPP 794
           SSG++KNIFKQKPP
Sbjct: 284 SSGVRKNIFKQKPP 297


>ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
           gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related
           protein RABC1 [Vitis vinifera]
          Length = 211

 Score =  367 bits (941), Expect = 3e-99
 Identities = 180/194 (92%), Positives = 191/194 (98%)
 Frame = +3

Query: 213 SQPEFDYLFKLLLIGDSGVGKSSLLLRFTSDSFEDLSPTIGVDFKVKMVTMGGKRLKLAI 392
           SQPEFDYLFKLLLIGDSGVGKS+LLL FTS++FEDLSPTIGVDFKVK V +GGK+LKLAI
Sbjct: 8   SQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAI 67

Query: 393 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKMLV 572
           WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIKMLV
Sbjct: 68  WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 127

Query: 573 GNKVDKESERVVTKKEGIDFARQYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLAEG 752
           GNKVDKESERVVTKKEGIDFAR+YGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLLAEG
Sbjct: 128 GNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEG 187

Query: 753 SSGLKKNIFKQKPP 794
           SSG++KNIFKQKPP
Sbjct: 188 SSGVRKNIFKQKPP 201


Top