BLASTX nr result

ID: Dioscorea21_contig00001169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001169
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458878.1| hypothetical protein SORBIDRAFT_03g042020 [S...    60   1e-06
gb|ACR35787.1| unknown [Zea mays] gi|414879350|tpg|DAA56481.1| T...    59   1e-06

>ref|XP_002458878.1| hypothetical protein SORBIDRAFT_03g042020 [Sorghum bicolor]
            gi|241930853|gb|EES03998.1| hypothetical protein
            SORBIDRAFT_03g042020 [Sorghum bicolor]
          Length = 567

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 15/288 (5%)
 Frame = -2

Query: 910  SSSTVKEFSVSARNGLKLENRIKPKKDNALQR----QKHPIHKTTGKVERNIGSCTSTSS 743
            SS+  +  S   R+ +  EN   P   +  +R    ++ P+ +   + E N+ +    S+
Sbjct: 296  SSAGARRPSTGDRHAIAKENSQLPAVVSTPRRPSTAERRPVTRDRAQKEANVTTPRRPST 355

Query: 742  RVSKNIKSTVAVTHRTLTEVRSNGTIPRPFSLATERRAATFENKLDERGLVTKLPNRLTT 563
                 +K   A  H  ++ VR   T         ERRA T ++ +       K P++   
Sbjct: 356  SERLPVKRENAAKHNDISAVRRPST--------GERRAITRDSVVRTD---VKTPSKARA 404

Query: 562  SLNHAKGVISAQGSFNKTATTSGVRSKGQENK------RGQEVQDKTLACGKQSFNGRST 401
            ++ H KG  +  G+  K  T +  RS   E K      +G  V D      K+     S 
Sbjct: 405  TVAHPKGETTTVGNTKKAVTPNAARSGKLETKSNNNRLKGPSVLDSHSTRSKRMDLQAS- 463

Query: 400  LVLGQQKARSVDLPARNIPNRSGGIEHKFSIAFGRNLRKE-IKEDLRSREPSGSGTRIMS 224
               G+QK+ SV+LP R I + + G     +I+  R+ +KE ++  ++SR  +   T  + 
Sbjct: 464  ---GKQKSSSVNLPPRKIFSSTAGEPAVETIS--RSKKKEGVQATVQSRASTSKRTTPLQ 518

Query: 223  SQNGNPRTGNIKAGQCLTKPDKK----KLPIGNASVDVKKPKQPMPRW 92
            + N   R  N  A      P +       P G +S+  +KPK   P+W
Sbjct: 519  TGNLKARAPNPPAPPAPPPPRRTSRMISKPTGASSIVGRKPKASAPQW 566


>gb|ACR35787.1| unknown [Zea mays] gi|414879350|tpg|DAA56481.1| TPA: hypothetical
            protein ZEAMMB73_143819 [Zea mays]
            gi|414879351|tpg|DAA56482.1| TPA: hypothetical protein
            ZEAMMB73_143819 [Zea mays] gi|414879352|tpg|DAA56483.1|
            TPA: hypothetical protein ZEAMMB73_143819 [Zea mays]
            gi|414879353|tpg|DAA56484.1| TPA: hypothetical protein
            ZEAMMB73_143819 [Zea mays] gi|414879354|tpg|DAA56485.1|
            TPA: hypothetical protein ZEAMMB73_143819 [Zea mays]
          Length = 571

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 18/305 (5%)
 Frame = -2

Query: 952  KKNKSTVRASANGI---SSSTVKEFSVSARNGLKLENRIKPKKDNALQR----QKHPIHK 794
            K + ST R+   G+   SS+  +  S   R+ +  EN   P   +  +R    ++ P+ +
Sbjct: 284  KMSASTERSKLTGLRRPSSAGAQRPSTGERHAIARENSQLPVVVSTPRRPSTAERRPVTR 343

Query: 793  TTGKVERNIGSCTSTSSRVSKNIKSTVAVTHRTLTEVRSNGTIPRPFSLATERRAATFEN 614
               + + N+ +    S+     IK   A  H  ++ VR   T         ERRA T + 
Sbjct: 344  DRAEKQANVTTPRRPSTSERLPIKRETAAKHNDISAVRRPST--------GERRAFTRDG 395

Query: 613  KLDERGLVTKLPNRLTTSLNHAKGVISAQGSFNKTATTSGVRSKGQENKRGQEVQDKTLA 434
             L       K P++   ++ H    ++  G+  K  T +  RS   E K          A
Sbjct: 396  VLRTD---VKTPSKARATVAHPMSEMTTVGNTRKAITPNAARSSKLETKSNNYRLKGPSA 452

Query: 433  CGKQSF--NGRSTLVLGQQKARSVDLPARNIPNRSGGIEHKFSIAFGRNLRKE-IKEDLR 263
                S   N     V G+QK+ SV+LP R I + + G     +I+  R+ +KE ++  ++
Sbjct: 453  LDSHSTRSNRMDLQVSGKQKSSSVNLPPRKIFSSTAGEPSVGTIS--RSKKKEGVQATVQ 510

Query: 262  SREPSGSGTRIMSSQNGNPRTGNIKA--------GQCLTKPDKKKLPIGNASVDVKKPKQ 107
            SR  +   T  + + N   R  N  A         +  TKP       G +S+  +KPK 
Sbjct: 511  SRASTSKRTTPLQTGNLKARGPNPPAPPPPPRRPSRTTTKPS-----AGASSIGGRKPKA 565

Query: 106  PMPRW 92
              P+W
Sbjct: 566  SAPQW 570


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