BLASTX nr result

ID: Dioscorea21_contig00001165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001165
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   271   2e-70
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-70
ref|XP_002333929.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-70
gb|AEO33732.1| hypothetical protein [Amblyomma maculatum]             266   6e-69
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   265   2e-68

>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  271 bits (694), Expect = 2e-70
 Identities = 153/286 (53%), Positives = 184/286 (64%), Gaps = 4/286 (1%)
 Frame = -2

Query: 1252 AGNPEGINIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMAISCILLLAFLVV 1073
            AGN  GI IHAVFVS+ SG +L+ YA   D+ +W+IPS E+SAWS+MAIS I LLA   V
Sbjct: 122  AGNSAGIKIHAVFVSKASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAV 181

Query: 1072 LATCFFXXXXXXXXXXXXXXXXQEFHGMSRQLVKAMPIVVFTTVLEDNCTSRTCAICLED 893
            LATCFF                +EFHGMS +LVKAMP ++FTTVLEDNCTSRTCAICLED
Sbjct: 182  LATCFFVRRHRIRRQRPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLED 241

Query: 892  YNPGEKLRVLPCQHKFHASCVDSWLTTWRTFCPVCKQDARLSTSISPASERTPLLPNNAS 713
            YN GEKLR+LPC+HKFHA CVDSWLT+WRTFCPVCK+DAR ST   P SE TPLL ++  
Sbjct: 242  YNVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-DPPSESTPLLSSSPG 300

Query: 712  SPHSSFRLPSINASLAEFPRIQV--DAGPTSSATTSWFCSLYSNSQI-PSLSGSNNSLPY 542
            S   S  + S+ +SLA    I +     P+ S + S   SL +   I  SL     S   
Sbjct: 301  SLAPSSLVSSVRSSLASSSAIHIAPSPSPSHSLSVSRNNSLSATPYIQQSLQSYRQSSLS 360

Query: 541  ISRSSTDLSRILFQRSNMCYPTAPHPQGL-AVTSLNPRLTSSLYIP 407
            +SRSS DL     QRS+  Y  +PH  G  +++ LN R  S  YIP
Sbjct: 361  VSRSSLDLRNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSP-YIP 405


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  271 bits (693), Expect = 3e-70
 Identities = 155/313 (49%), Positives = 189/313 (60%), Gaps = 1/313 (0%)
 Frame = -2

Query: 1252 AGNPEGINIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMAISCILLLAFLVV 1073
            AGN  G+ I AVFVS+ SGE LKKYA   DL +W+IPS E+SAWS+MAIS I LLA   V
Sbjct: 118  AGNSAGVTIPAVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAMSAV 177

Query: 1072 LATCFFXXXXXXXXXXXXXXXXQEFHGMSRQLVKAMPIVVFTTVLEDNCTSRTCAICLED 893
            LATCFF                +EFHGMS +LVKAMP + FT+ LEDNCTS TCAICLED
Sbjct: 178  LATCFFVRRHRIRRERPRSSRVREFHGMSSRLVKAMPSLTFTSALEDNCTSTTCAICLED 237

Query: 892  YNPGEKLRVLPCQHKFHASCVDSWLTTWRTFCPVCKQDARLSTSISPASERTPLLPNNAS 713
            Y  GEKLR+LPC+HKFHA CVDSWLTTWRTFCPVCK+DAR ST   PA+E TPLL +N S
Sbjct: 238  YTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGEPPATESTPLLSSNPS 297

Query: 712  SPHSSFRLPSINASLAEFPRIQVDAGPTSSATTSWFCSLYSNSQIPSLSGSNNSLPYISR 533
            S  SS  L S  +  +   +I     P+ S   S   + Y+   + S   S +    +S+
Sbjct: 298  SLASSSMLSSFRSGTSTAIQITPSRTPSVSYIPSLSSTPYAQQSLRSYRHSPSIT--LSQ 355

Query: 532  SSTDLSRILFQRSNMCYPTAPHPQGL-AVTSLNPRLTSSLYIPXXXXXXXXXXXXXXSQQ 356
            SS DL  +   RS   +  +PH  G  +++ LN R  S+ YIP                +
Sbjct: 356  SSADLRNMSSLRSRASFLVSPHSLGYPSISPLNTRYMSA-YIPSPSNASPSLVSSSRQPR 414

Query: 355  PLLRYCSEPGASF 317
            PL  +CSE  ASF
Sbjct: 415  PL--HCSESAASF 425


>ref|XP_002333929.1| predicted protein [Populus trichocarpa] gi|222839169|gb|EEE77520.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  271 bits (692), Expect = 3e-70
 Identities = 159/312 (50%), Positives = 190/312 (60%), Gaps = 1/312 (0%)
 Frame = -2

Query: 1252 AGNPEGINIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMAISCILLLAFLVV 1073
            AGN  G+ IHAVFVS+ SGE L KYA    L +WLIPS E+SAWS+MAIS I LLA   V
Sbjct: 127  AGNSVGVKIHAVFVSKKSGETLTKYAGLTGLELWLIPSFENSAWSIMAISFISLLAMSAV 186

Query: 1072 LATCFFXXXXXXXXXXXXXXXXQEFHGMSRQLVKAMPIVVFTTVLEDNCTSRTCAICLED 893
            LATCFF                +EFHGMS +LVKAMP + FT+VLEDNCTS TCAICLED
Sbjct: 187  LATCFFIRRHRIRREHSHSSRVREFHGMSSRLVKAMPSLTFTSVLEDNCTSTTCAICLED 246

Query: 892  YNPGEKLRVLPCQHKFHASCVDSWLTTWRTFCPVCKQDARLSTSISPASERTPLLPNNAS 713
            Y  GEKLR+LPC+HKFHA CVDSWLTTWRTFCPVCK+DAR ST   PASE TPLL +N S
Sbjct: 247  YTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGDPPASESTPLLSSNPS 306

Query: 712  SPHSSFRLPSINASLAEFPRIQVDAGPTSSATTSWFCSLYSNSQIPSLSGSNNSLPYISR 533
            S  SS  L S  +  +   +I     P+ S  +S   + Y   Q P  S  +++   IS 
Sbjct: 307  SFASSSMLSSFRSGTSTAIQIASSRTPSVSHISSLSSTPY--VQQPLRSYRHSTSISISH 364

Query: 532  SSTDLSRILFQRSNMCYPTAPHPQGL-AVTSLNPRLTSSLYIPXXXXXXXXXXXXXXSQQ 356
            SS DL  +  QRS   +  +PH  G  +++ LN R  S+ YIP                +
Sbjct: 365  SSADLRHMSSQRSLTSHLVSPHSLGYPSISPLNTRYMSA-YIPSPSNASPSLVSSSHQPR 423

Query: 355  PLLRYCSEPGAS 320
            PL  YCSE  +S
Sbjct: 424  PL--YCSESVSS 433


>gb|AEO33732.1| hypothetical protein [Amblyomma maculatum]
          Length = 365

 Score =  266 bits (681), Expect = 6e-69
 Identities = 159/318 (50%), Positives = 198/318 (62%), Gaps = 4/318 (1%)
 Frame = -2

Query: 1252 AGNPEGINIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMAISCILLLAFLVV 1073
            +G+P GI+IHAVFVS+ SGE L+KY       +W+IP+ E+SAW+VMAIS I LLA   V
Sbjct: 37   SGSPGGIHIHAVFVSKFSGETLRKYVSCTGTKLWIIPTFENSAWTVMAISFISLLAMSAV 96

Query: 1072 LATCFFXXXXXXXXXXXXXXXXQEFHGMSRQLVKAMPIVVFTTVLEDNCTSRTCAICLED 893
            LATCFF                +EFHGMSR+LVKAMP ++FT+VLEDNCTS TCAICLED
Sbjct: 97   LATCFFVRRQRIRHEQPRAPNIREFHGMSRRLVKAMPSLIFTSVLEDNCTSATCAICLED 156

Query: 892  YNPGEKLRVLPCQHKFHASCVDSWLTTWRTFCPVCKQDARLSTSISPASERTPLLPNNAS 713
            Y+ GEKLR+LPC+HKFHA CVDSWLTTWRTFCPVCKQDAR ST   P  E TPLL +  S
Sbjct: 157  YSIGEKLRILPCRHKFHAICVDSWLTTWRTFCPVCKQDARTSTGNPPPLECTPLLSSAGS 216

Query: 712  SPHSSFRLPSINASLAEFPRIQVDAGPTSSATTSWFCSLY-SNSQIPS-LSGSNNSLPYI 539
            +P+SSF     ++S+A    + ++A P  S  TS   SL+ S  + P+  S SN+    I
Sbjct: 217  TPNSSF-----HSSIAGSSAVWINANPLLSPLTSRTHSLHGSIPRAPNPRSLSNSPAISI 271

Query: 538  SRSSTDLSRILFQRSNMCYPTAPHPQGLAVTS-LNPRLTSSLYIPXXXXXXXXXXXXXXS 362
            + SS DL    F+R +     +PH  GL  +S +N R  S  YIP              S
Sbjct: 272  NSSSVDLRNASFRRLH----ASPHSLGLHQSSPINSRYMSP-YIPSSSSASPSYLLSGSS 326

Query: 361  QQP-LLRYCSEPGASFFA 311
             +P  LR+C   G S  A
Sbjct: 327  SRPSYLRHCGASGTSLSA 344


>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score =  265 bits (677), Expect = 2e-68
 Identities = 171/342 (50%), Positives = 202/342 (59%), Gaps = 30/342 (8%)
 Frame = -2

Query: 1252 AGNPEGINIHAVFVSRVSGEILKKYARRRDLTVWLIPSVESSAWSVMAISCILLLAFLVV 1073
            AGN  GI IHAVFVS+ SGEIL KYA   ++ +WLIP+ E+SAWS+MAIS I LLA   V
Sbjct: 120  AGNSAGIKIHAVFVSKASGEILSKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAV 179

Query: 1072 LATCFFXXXXXXXXXXXXXXXXQEFHGMSRQLVKAMPIVVFTTVLEDNCTSRTCAICLED 893
            LATCFF                +EFHGMS +LVKAMP ++FT VLEDNCTSRTCAICLED
Sbjct: 180  LATCFFVRRHRIRRERPRAPLVREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLED 239

Query: 892  YNPGEKLRVLPCQHKFHASCVDSWLTTWRTFCPVCKQDARLSTSISPASERTPLLPNNAS 713
            Y  GEKLR+LPC HKFHA+CVDSWLT+WRTFCPVCK+DAR   +  P SE TPLL +  +
Sbjct: 240  YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARSGLTDPPPSESTPLLSSTPA 299

Query: 712  SPHSSFRLPSINASLAEFPRIQV--DAGPTSSATTSWFCSLYSN---------SQIPSLS 566
            S  SS  L S  +SLA    IQ+   A   SSA  S   SL S+         SQ PS+S
Sbjct: 300  SMASSV-LSSARSSLASSSAIQIARTASMASSALPSARSSLASSSAIQIARAASQTPSVS 358

Query: 565  GSNN--SLPY----------------ISRSSTDLSRILFQRSNMCYPTAPHPQGL-AVTS 443
             +++  S PY                ISRSS DL R   QRS   +  +P   G  +++S
Sbjct: 359  RNHSIASTPYVQPSLRSSYHQSPSLSISRSSVDL-RNASQRSLASHLNSPRSMGYPSLSS 417

Query: 442  LNPRLTSSLYIPXXXXXXXXXXXXXXSQQPLLRYCSEPGASF 317
            LN R  S  +IP               QQ  LRY SE  ASF
Sbjct: 418  LNSRYMSP-HIPSPSNASVSYMGSSSHQQHPLRY-SESAASF 457


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