BLASTX nr result

ID: Dioscorea21_contig00001133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001133
         (2092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ...   892   0.0  
emb|CBI19306.3| unnamed protein product [Vitis vinifera]              891   0.0  
ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, ...   891   0.0  
ref|XP_002310916.1| precursor of transferase serine hydroxymethy...   889   0.0  
gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Po...   889   0.0  

>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Vitis
            vinifera] gi|297736687|emb|CBI25704.3| unnamed protein
            product [Vitis vinifera]
          Length = 518

 Score =  892 bits (2306), Expect = 0.0
 Identities = 450/509 (88%), Positives = 478/509 (93%), Gaps = 2/509 (0%)
 Frame = -1

Query: 1678 SSCVSK--KQPLSPGSLFYMSSLPSEAIYEKDKSRVTWPKQLNASLETVDPEIANIIELE 1505
            SS V K  +   + GS++YM+SLP+EA+YEK+KSRVTWPKQLNA L  VDPEIA+IIELE
Sbjct: 11   SSSVDKPVRSVFNGGSIYYMASLPNEAVYEKEKSRVTWPKQLNAPLGVVDPEIADIIELE 70

Query: 1504 KARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 1325
            KARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA
Sbjct: 71   KARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 130

Query: 1324 LEAFRLDSATWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 1145
            LEAFRLD A WGVNVQSLSGSPANFQVYTALLK HERIMALDLPHGGHLSHGYQTDTKKI
Sbjct: 131  LEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKAHERIMALDLPHGGHLSHGYQTDTKKI 190

Query: 1144 SAVSIFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 965
            SAVSIFFETMPYRLNESTGYIDYDQLEKSA LFRPKLIVAGASAYARLYDYARIRKVCDK
Sbjct: 191  SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDK 250

Query: 964  QKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQG 785
            QKAILLADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIF+RKGVKE+NKQG
Sbjct: 251  QKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVKEVNKQG 310

Query: 784  HEVLYDFEDKINAAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCTKFAQR 605
             EVLYD+EDKIN AVFPGLQGGPHNHTIAGLAVALKQATT EYKAYQEQVLSNC+KFA+ 
Sbjct: 311  KEVLYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTSEYKAYQEQVLSNCSKFAET 370

Query: 604  LAEKGYELVSGGTENHLVLVNLQNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGI 425
            L +KGYELVSGGTENHLVLVNL+NKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGI
Sbjct: 371  LIKKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 430

Query: 424  RMGTPALTSRGFVEDDFAKVADFFDTAVKLALKIKAGTKGGSKLKDFLFTIQTDSSIQSE 245
            RMGTPALTSRGFVE+DF KVA++FD AV +A+KIKA T  G+KLKDFL T+Q+   +QSE
Sbjct: 431  RMGTPALTSRGFVEEDFVKVAEYFDAAVTVAVKIKAETT-GTKLKDFLATMQSSPHLQSE 489

Query: 244  IAKLRYEVEEYAKQFPTIGFEKETMKYKD 158
            IAKLR+EVEEYAKQFPTIGFEKETMKYK+
Sbjct: 490  IAKLRHEVEEYAKQFPTIGFEKETMKYKN 518


>emb|CBI19306.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  891 bits (2302), Expect = 0.0
 Identities = 446/507 (87%), Positives = 476/507 (93%), Gaps = 4/507 (0%)
 Frame = -1

Query: 1666 SKKQPLSP----GSLFYMSSLPSEAIYEKDKSRVTWPKQLNASLETVDPEIANIIELEKA 1499
            S K+P+ P    GSL+YMSSLP+E + EK+KSR+TW KQLNA LE VDPEIA+IIELEKA
Sbjct: 9    SVKKPIGPLINGGSLYYMSSLPNEVVCEKEKSRITWTKQLNAPLEVVDPEIADIIELEKA 68

Query: 1498 RQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 1319
            RQWKGLELIPSENFTSVSVMQAVGS+MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE
Sbjct: 69   RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 128

Query: 1318 AFRLDSATWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 1139
            AF+LD A WGVNVQSLSGSPANFQ YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA
Sbjct: 129  AFQLDPAKWGVNVQSLSGSPANFQAYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 188

Query: 1138 VSIFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 959
            VSIFFETMPYRL+E TGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK
Sbjct: 189  VSIFFETMPYRLDEKTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 248

Query: 958  AILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGHE 779
            A++LADMAHISGLVAAGVI SPFEYAD+VTTTTHKSLRGPRGAMIF+RKGVKEINKQG E
Sbjct: 249  AVMLADMAHISGLVAAGVIQSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 308

Query: 778  VLYDFEDKINAAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCTKFAQRLA 599
            VLYD+EDKIN AVFPGLQGGPHNHTI+GLAVALKQA TPEYKAYQEQVL+NC+ FAQ L 
Sbjct: 309  VLYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQAMTPEYKAYQEQVLTNCSTFAQSLL 368

Query: 598  EKGYELVSGGTENHLVLVNLQNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRM 419
            EKGYELVSGGT+NHLVLVNL+NKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRM
Sbjct: 369  EKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 428

Query: 418  GTPALTSRGFVEDDFAKVADFFDTAVKLALKIKAGTKGGSKLKDFLFTIQTDSSIQSEIA 239
            GTPALTSRGFVE+DF KVA+ FD AVKLALKIKA +K G+KLKDF+ T+Q+D+  QSEIA
Sbjct: 429  GTPALTSRGFVEEDFVKVAELFDAAVKLALKIKANSK-GTKLKDFVATMQSDAETQSEIA 487

Query: 238  KLRYEVEEYAKQFPTIGFEKETMKYKD 158
            KLR+EVEEYAKQFPTIGFEKETMKYKD
Sbjct: 488  KLRHEVEEYAKQFPTIGFEKETMKYKD 514


>ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 516

 Score =  891 bits (2302), Expect = 0.0
 Identities = 446/507 (87%), Positives = 476/507 (93%), Gaps = 4/507 (0%)
 Frame = -1

Query: 1666 SKKQPLSP----GSLFYMSSLPSEAIYEKDKSRVTWPKQLNASLETVDPEIANIIELEKA 1499
            S K+P+ P    GSL+YMSSLP+E + EK+KSR+TW KQLNA LE VDPEIA+IIELEKA
Sbjct: 11   SVKKPIGPLINGGSLYYMSSLPNEVVCEKEKSRITWTKQLNAPLEVVDPEIADIIELEKA 70

Query: 1498 RQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 1319
            RQWKGLELIPSENFTSVSVMQAVGS+MTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE
Sbjct: 71   RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 130

Query: 1318 AFRLDSATWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 1139
            AF+LD A WGVNVQSLSGSPANFQ YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA
Sbjct: 131  AFQLDPAKWGVNVQSLSGSPANFQAYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 190

Query: 1138 VSIFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 959
            VSIFFETMPYRL+E TGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK
Sbjct: 191  VSIFFETMPYRLDEKTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 250

Query: 958  AILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGHE 779
            A++LADMAHISGLVAAGVI SPFEYAD+VTTTTHKSLRGPRGAMIF+RKGVKEINKQG E
Sbjct: 251  AVMLADMAHISGLVAAGVIQSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKE 310

Query: 778  VLYDFEDKINAAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCTKFAQRLA 599
            VLYD+EDKIN AVFPGLQGGPHNHTI+GLAVALKQA TPEYKAYQEQVL+NC+ FAQ L 
Sbjct: 311  VLYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQAMTPEYKAYQEQVLTNCSTFAQSLL 370

Query: 598  EKGYELVSGGTENHLVLVNLQNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRM 419
            EKGYELVSGGT+NHLVLVNL+NKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRM
Sbjct: 371  EKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 430

Query: 418  GTPALTSRGFVEDDFAKVADFFDTAVKLALKIKAGTKGGSKLKDFLFTIQTDSSIQSEIA 239
            GTPALTSRGFVE+DF KVA+ FD AVKLALKIKA +K G+KLKDF+ T+Q+D+  QSEIA
Sbjct: 431  GTPALTSRGFVEEDFVKVAELFDAAVKLALKIKANSK-GTKLKDFVATMQSDAETQSEIA 489

Query: 238  KLRYEVEEYAKQFPTIGFEKETMKYKD 158
            KLR+EVEEYAKQFPTIGFEKETMKYKD
Sbjct: 490  KLRHEVEEYAKQFPTIGFEKETMKYKD 516


>ref|XP_002310916.1| precursor of transferase serine hydroxymethyltransferase 2 [Populus
            trichocarpa] gi|222850736|gb|EEE88283.1| precursor of
            transferase serine hydroxymethyltransferase 2 [Populus
            trichocarpa]
          Length = 518

 Score =  889 bits (2297), Expect = 0.0
 Identities = 449/505 (88%), Positives = 475/505 (94%), Gaps = 5/505 (0%)
 Frame = -1

Query: 1657 QPLSPG-----SLFYMSSLPSEAIYEKDKSRVTWPKQLNASLETVDPEIANIIELEKARQ 1493
            +PL P      SL+YMSSLP EA+YEK+K  VTWPKQLNA LE VDP+IA+IIELEKARQ
Sbjct: 16   KPLRPALFKATSLYYMSSLPDEAVYEKEKPGVTWPKQLNAPLEVVDPQIADIIELEKARQ 75

Query: 1492 WKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 1313
            WKGLELIPSENFTSVSVMQAVGS+MTNKYSEGYPGARYYGGNE+IDMAESLCQKRALEAF
Sbjct: 76   WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEFIDMAESLCQKRALEAF 135

Query: 1312 RLDSATWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 1133
            RLD A WGVNVQSLSGSP+NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS
Sbjct: 136  RLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195

Query: 1132 IFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAI 953
            IFFETMPYRLNESTGYIDYDQLEKSA LFRPKLIVAGASAYARLYDYARIRKVCDKQKAI
Sbjct: 196  IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAI 255

Query: 952  LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGHEVL 773
            LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RKG+KE+NKQG EV 
Sbjct: 256  LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVF 315

Query: 772  YDFEDKINAAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCTKFAQRLAEK 593
            YD+EDKIN AVFPGLQGGPHNHTIAGLAVALKQATT EYKAYQEQVLSNC+KFAQ L EK
Sbjct: 316  YDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTLEYKAYQEQVLSNCSKFAQSLVEK 375

Query: 592  GYELVSGGTENHLVLVNLQNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGT 413
            GYELVSGGTENHLVLVNL+NKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGT
Sbjct: 376  GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435

Query: 412  PALTSRGFVEDDFAKVADFFDTAVKLALKIKAGTKGGSKLKDFLFTIQTDSSIQSEIAKL 233
            PALTSRGFVE+DFAKVADFFD +VKLA+K+KA TK G+KLKDFL T+Q+ +  QSEI+KL
Sbjct: 436  PALTSRGFVEEDFAKVADFFDASVKLAVKMKAETK-GTKLKDFLVTMQS-AHFQSEISKL 493

Query: 232  RYEVEEYAKQFPTIGFEKETMKYKD 158
            R+EVEEYAKQFPTIGF KETMKYK+
Sbjct: 494  RHEVEEYAKQFPTIGFNKETMKYKN 518


>gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
          Length = 520

 Score =  889 bits (2297), Expect = 0.0
 Identities = 449/505 (88%), Positives = 475/505 (94%), Gaps = 5/505 (0%)
 Frame = -1

Query: 1657 QPLSPG-----SLFYMSSLPSEAIYEKDKSRVTWPKQLNASLETVDPEIANIIELEKARQ 1493
            +PL P      SL+YMSSLP EA+YEK+K  VTWPKQLNA LE VDP+IA+IIELEKARQ
Sbjct: 18   KPLRPALFKATSLYYMSSLPDEAVYEKEKPGVTWPKQLNAPLEVVDPQIADIIELEKARQ 77

Query: 1492 WKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 1313
            WKGLELIPSENFTSVSVMQAVGS+MTNKYSEGYPGARYYGGNE+IDMAESLCQKRALEAF
Sbjct: 78   WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEFIDMAESLCQKRALEAF 137

Query: 1312 RLDSATWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 1133
            RLD A WGVNVQSLSGSP+NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS
Sbjct: 138  RLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 197

Query: 1132 IFFETMPYRLNESTGYIDYDQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAI 953
            IFFETMPYRLNESTGYIDYDQLEKSA LFRPKLIVAGASAYARLYDYARIRKVCDKQKAI
Sbjct: 198  IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAI 257

Query: 952  LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGHEVL 773
            LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RKG+KE+NKQG EV 
Sbjct: 258  LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVF 317

Query: 772  YDFEDKINAAVFPGLQGGPHNHTIAGLAVALKQATTPEYKAYQEQVLSNCTKFAQRLAEK 593
            YD+EDKIN AVFPGLQGGPHNHTIAGLAVALKQATT EYKAYQEQVLSNC+KFAQ L EK
Sbjct: 318  YDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTLEYKAYQEQVLSNCSKFAQSLVEK 377

Query: 592  GYELVSGGTENHLVLVNLQNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGT 413
            GYELVSGGTENHLVLVNL+NKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGT
Sbjct: 378  GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 437

Query: 412  PALTSRGFVEDDFAKVADFFDTAVKLALKIKAGTKGGSKLKDFLFTIQTDSSIQSEIAKL 233
            PALTSRGFVE+DFAKVADFFD +VKLA+K+KA TK G+KLKDFL T+Q+ +  QSEI+KL
Sbjct: 438  PALTSRGFVEEDFAKVADFFDASVKLAVKMKAETK-GTKLKDFLVTMQS-AHFQSEISKL 495

Query: 232  RYEVEEYAKQFPTIGFEKETMKYKD 158
            R+EVEEYAKQFPTIGF KETMKYK+
Sbjct: 496  RHEVEEYAKQFPTIGFNKETMKYKN 520


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