BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001068
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| T...   440   0.0  
ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor...   440   0.0  
ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA h...   438   0.0  
gb|ABF95605.1| Pre-mRNA splicing factor ATP-dependent RNA helica...   432   0.0  
ref|NP_001049931.1| Os03g0314100 [Oryza sativa Japonica Group] g...   432   0.0  

>gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| TPA: putative RNA
           helicase family protein [Zea mays]
          Length = 721

 Score =  440 bits (1132), Expect(2) = 0.0
 Identities = 215/243 (88%), Positives = 232/243 (95%)
 Frame = -3

Query: 730 VVQIHMREPPGDILLFLTGEEEIEDACRKIKKEINDLGDQFGPVKVVPLYSSLAMVMQQK 551
           V+QIHM EP GDIL+FLTGEEEIEDACRKI KE N++GDQ GPVKVVPLYS+L   MQQK
Sbjct: 264 VMQIHMCEPAGDILVFLTGEEEIEDACRKINKETNNMGDQVGPVKVVPLYSTLPPAMQQK 323

Query: 550 IFEPAPAPLKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKIYNPRVRVESLLV 371
           IFEPAPAPLK+GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK+YNPR+RVESLLV
Sbjct: 324 IFEPAPAPLKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 383

Query: 370 TPISKASAHQRSGRAGRTCPGKCFRLYTENSFNTDLQPQTYPELLRSDLANTVLTLKKLG 191
           +PISKASAHQR+GRAGRT PGKCFRLYTE SFN DLQPQTYPE+LRS+LANTVLTLKKLG
Sbjct: 384 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNEDLQPQTYPEILRSNLANTVLTLKKLG 443

Query: 190 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEMMSEFPLDPQMSKMLIVS 11
           IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLT+LGEMMSEFPLDPQMSKML++S
Sbjct: 444 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTQLGEMMSEFPLDPQMSKMLVIS 503

Query: 10  PEF 2
           P++
Sbjct: 504 PKY 506



 Score =  291 bits (746), Expect(2) = 0.0
 Identities = 146/189 (77%), Positives = 159/189 (84%)
 Frame = -1

Query: 1410 MNRWTGMPYSARYFEILEKRKTLPVWLQKDEFLEALMANQILILVGETGSGKTTQIPQFV 1231
            +NRW G PY+ARYF+ILEKR+TLPVW QK+EFL +L  NQ LILVGETGSGKTTQIPQFV
Sbjct: 42   VNRWNGRPYTARYFDILEKRRTLPVWQQKEEFLRSLRDNQTLILVGETGSGKTTQIPQFV 101

Query: 1230 LEAEGLGKPLVVACTQPXXXXXXXXXXXXAEEMDVILGEEVGYTIRFEDCSSQKTILKYL 1051
            LE EGLG   +VACTQP            AEEMDV +GEEVGY+IRFEDCSS KT+LKYL
Sbjct: 102  LETEGLGNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYL 161

Query: 1050 TDGMLLREASADPLLERYNVIILDEAHERTLATDVLFGLLKEVLSKRPDLKLVIMSATLE 871
            TDGMLLREA ADPLLE+Y VI+LDEAHERTLATDVLFGLLKEVL  RPDLKLV+MSATLE
Sbjct: 162  TDGMLLREAMADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 221

Query: 870  AEKFQDYFN 844
            AEKFQ YFN
Sbjct: 222  AEKFQGYFN 230


>ref|XP_003558051.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Brachypodium distachyon]
          Length = 719

 Score =  440 bits (1132), Expect(2) = 0.0
 Identities = 215/243 (88%), Positives = 230/243 (94%)
 Frame = -3

Query: 730 VVQIHMREPPGDILLFLTGEEEIEDACRKIKKEINDLGDQFGPVKVVPLYSSLAMVMQQK 551
           VVQIHM EP GDIL+FLTGEEEIEDACRKI KE+N++GDQ GPVKVVPLYS+L   MQQK
Sbjct: 262 VVQIHMCEPAGDILVFLTGEEEIEDACRKINKEVNNMGDQVGPVKVVPLYSTLPPAMQQK 321

Query: 550 IFEPAPAPLKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKIYNPRVRVESLLV 371
           IFEPAPAPLK+GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK+YNPR+RVESLLV
Sbjct: 322 IFEPAPAPLKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 381

Query: 370 TPISKASAHQRSGRAGRTCPGKCFRLYTENSFNTDLQPQTYPELLRSDLANTVLTLKKLG 191
           +PISKASAHQR+GRAGRT PGKCFRLYTE SFN DL PQTYPE+LRS+LANTVLTLKKLG
Sbjct: 382 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNDDLHPQTYPEILRSNLANTVLTLKKLG 441

Query: 190 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEMMSEFPLDPQMSKMLIVS 11
           IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLT LGEMMSEFPLDPQMSKML++S
Sbjct: 442 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTSLGEMMSEFPLDPQMSKMLVIS 501

Query: 10  PEF 2
           P +
Sbjct: 502 PRY 504



 Score =  290 bits (742), Expect(2) = 0.0
 Identities = 147/189 (77%), Positives = 158/189 (83%)
 Frame = -1

Query: 1410 MNRWTGMPYSARYFEILEKRKTLPVWLQKDEFLEALMANQILILVGETGSGKTTQIPQFV 1231
            +N+W G PYSARY EILEKR+TLPVW QK+EFL AL  NQ LILVGETGSGKTTQIPQFV
Sbjct: 40   INKWNGRPYSARYLEILEKRRTLPVWQQKEEFLRALRDNQTLILVGETGSGKTTQIPQFV 99

Query: 1230 LEAEGLGKPLVVACTQPXXXXXXXXXXXXAEEMDVILGEEVGYTIRFEDCSSQKTILKYL 1051
            LEAEGL    +VACTQP            AEEMDV +GEEVGY+IRFEDCSS KT+LKYL
Sbjct: 100  LEAEGLSNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYL 159

Query: 1050 TDGMLLREASADPLLERYNVIILDEAHERTLATDVLFGLLKEVLSKRPDLKLVIMSATLE 871
            TDGMLLREA ADPLLERY VI+LDEAHERTLATDVLFGLLKEVL  RPDLKLV+MSATLE
Sbjct: 160  TDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 219

Query: 870  AEKFQDYFN 844
            AEKFQ YF+
Sbjct: 220  AEKFQGYFS 228


>ref|NP_001148911.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Zea mays]
           gi|195623176|gb|ACG33418.1| pre-mRNA-splicing factor
           ATP-dependent RNA helicase [Zea mays]
           gi|413955897|gb|AFW88546.1| putative RNA helicase family
           protein [Zea mays]
          Length = 722

 Score =  438 bits (1126), Expect(2) = 0.0
 Identities = 215/243 (88%), Positives = 231/243 (95%)
 Frame = -3

Query: 730 VVQIHMREPPGDILLFLTGEEEIEDACRKIKKEINDLGDQFGPVKVVPLYSSLAMVMQQK 551
           VVQIHM EP GDIL+FLTGEEEIEDACRKI KEIN++GDQ GPVKVVPLYS+L   MQQK
Sbjct: 265 VVQIHMCEPAGDILVFLTGEEEIEDACRKINKEINNMGDQVGPVKVVPLYSTLPPAMQQK 324

Query: 550 IFEPAPAPLKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKIYNPRVRVESLLV 371
           IFEPAPAPLK+ GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK+YNPR+RVESLLV
Sbjct: 325 IFEPAPAPLKERGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 384

Query: 370 TPISKASAHQRSGRAGRTCPGKCFRLYTENSFNTDLQPQTYPELLRSDLANTVLTLKKLG 191
           +PISKASAHQR+GRAGRT PGKCFRLYTE SFN DLQPQTYPE+LRS+LANTVLTLKKLG
Sbjct: 385 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNEDLQPQTYPEILRSNLANTVLTLKKLG 444

Query: 190 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEMMSEFPLDPQMSKMLIVS 11
           IDDLVHFDFMDPPAPETLMRALEVLNYL ALDDEGNLT+LGEMMSEFPLDPQMSKML++S
Sbjct: 445 IDDLVHFDFMDPPAPETLMRALEVLNYLAALDDEGNLTQLGEMMSEFPLDPQMSKMLVIS 504

Query: 10  PEF 2
           P++
Sbjct: 505 PKY 507



 Score =  290 bits (742), Expect(2) = 0.0
 Identities = 146/189 (77%), Positives = 158/189 (83%)
 Frame = -1

Query: 1410 MNRWTGMPYSARYFEILEKRKTLPVWLQKDEFLEALMANQILILVGETGSGKTTQIPQFV 1231
            +NRW G PY+ARYFEILEKR+TLPVW QK+EFL  L  NQ LILVGETGSGKTTQIPQFV
Sbjct: 43   VNRWNGRPYTARYFEILEKRRTLPVWQQKEEFLRRLRDNQTLILVGETGSGKTTQIPQFV 102

Query: 1230 LEAEGLGKPLVVACTQPXXXXXXXXXXXXAEEMDVILGEEVGYTIRFEDCSSQKTILKYL 1051
            LE EGLG   +VACTQP            AEEMDV +GEEVGY+IRFEDCSS KT+LKYL
Sbjct: 103  LETEGLGNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYL 162

Query: 1050 TDGMLLREASADPLLERYNVIILDEAHERTLATDVLFGLLKEVLSKRPDLKLVIMSATLE 871
            TDGMLLREA ADPLLE+Y VI+LDEAHERTLATDVLFGLLKEVL  RPDLKLV+MSATLE
Sbjct: 163  TDGMLLREAMADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 222

Query: 870  AEKFQDYFN 844
            AEKFQ YF+
Sbjct: 223  AEKFQGYFS 231


>gb|ABF95605.1| Pre-mRNA splicing factor ATP-dependent RNA helicase, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 722

 Score =  432 bits (1112), Expect(2) = 0.0
 Identities = 212/243 (87%), Positives = 229/243 (94%)
 Frame = -3

Query: 730 VVQIHMREPPGDILLFLTGEEEIEDACRKIKKEINDLGDQFGPVKVVPLYSSLAMVMQQK 551
           VVQIHM EP GDIL+FLTGEEEIEDACRKI KEIN++GDQ GPVKVVPLYS+L   MQQK
Sbjct: 265 VVQIHMCEPAGDILVFLTGEEEIEDACRKINKEINNMGDQVGPVKVVPLYSTLPPAMQQK 324

Query: 550 IFEPAPAPLKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKIYNPRVRVESLLV 371
           IFEPAPAP ++GGP GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK+YNPR+RVESLLV
Sbjct: 325 IFEPAPAPSREGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 384

Query: 370 TPISKASAHQRSGRAGRTCPGKCFRLYTENSFNTDLQPQTYPELLRSDLANTVLTLKKLG 191
           +PISKASAHQR+GRAGRT PGKCFRLYTE SFN DLQPQTYPE+LRS+LANTVLTLKKLG
Sbjct: 385 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNDDLQPQTYPEILRSNLANTVLTLKKLG 444

Query: 190 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEMMSEFPLDPQMSKMLIVS 11
           IDDLVHFDFMDPPAPETLMRALEVLNYLGALDD+GNLT LGE MSEFPLDPQMSKML++S
Sbjct: 445 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTPLGETMSEFPLDPQMSKMLVIS 504

Query: 10  PEF 2
           P++
Sbjct: 505 PKY 507



 Score =  291 bits (746), Expect(2) = 0.0
 Identities = 148/189 (78%), Positives = 158/189 (83%)
 Frame = -1

Query: 1410 MNRWTGMPYSARYFEILEKRKTLPVWLQKDEFLEALMANQILILVGETGSGKTTQIPQFV 1231
            +NRWTG PYSARY EILEKR+TLPVW QKD+FL  L  NQ LILVGETGSGKTTQIPQFV
Sbjct: 43   INRWTGRPYSARYLEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFV 102

Query: 1230 LEAEGLGKPLVVACTQPXXXXXXXXXXXXAEEMDVILGEEVGYTIRFEDCSSQKTILKYL 1051
            LEAEGL    +VACTQP            AEEMDV +GEEVGY+IRFEDCSS KT+LKYL
Sbjct: 103  LEAEGLSNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYL 162

Query: 1050 TDGMLLREASADPLLERYNVIILDEAHERTLATDVLFGLLKEVLSKRPDLKLVIMSATLE 871
            TDGMLLREA ADPLLERY VI+LDEAHERTLATDVLFGLLKEVL  RPDLKLV+MSATLE
Sbjct: 163  TDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 222

Query: 870  AEKFQDYFN 844
            AEKFQ YF+
Sbjct: 223  AEKFQTYFS 231


>ref|NP_001049931.1| Os03g0314100 [Oryza sativa Japonica Group]
           gi|108707809|gb|ABF95604.1| Pre-mRNA splicing factor
           ATP-dependent RNA helicase, putative, expressed [Oryza
           sativa Japonica Group] gi|113548402|dbj|BAF11845.1|
           Os03g0314100 [Oryza sativa Japonica Group]
           gi|215694063|dbj|BAG89262.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 564

 Score =  432 bits (1112), Expect(2) = 0.0
 Identities = 212/243 (87%), Positives = 229/243 (94%)
 Frame = -3

Query: 730 VVQIHMREPPGDILLFLTGEEEIEDACRKIKKEINDLGDQFGPVKVVPLYSSLAMVMQQK 551
           VVQIHM EP GDIL+FLTGEEEIEDACRKI KEIN++GDQ GPVKVVPLYS+L   MQQK
Sbjct: 265 VVQIHMCEPAGDILVFLTGEEEIEDACRKINKEINNMGDQVGPVKVVPLYSTLPPAMQQK 324

Query: 550 IFEPAPAPLKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKIYNPRVRVESLLV 371
           IFEPAPAP ++GGP GRKIVVSTNIAETSLTIDGIVYVIDPGFSKQK+YNPR+RVESLLV
Sbjct: 325 IFEPAPAPSREGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLV 384

Query: 370 TPISKASAHQRSGRAGRTCPGKCFRLYTENSFNTDLQPQTYPELLRSDLANTVLTLKKLG 191
           +PISKASAHQR+GRAGRT PGKCFRLYTE SFN DLQPQTYPE+LRS+LANTVLTLKKLG
Sbjct: 385 SPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNDDLQPQTYPEILRSNLANTVLTLKKLG 444

Query: 190 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEMMSEFPLDPQMSKMLIVS 11
           IDDLVHFDFMDPPAPETLMRALEVLNYLGALDD+GNLT LGE MSEFPLDPQMSKML++S
Sbjct: 445 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTPLGETMSEFPLDPQMSKMLVIS 504

Query: 10  PEF 2
           P++
Sbjct: 505 PKY 507



 Score =  291 bits (746), Expect(2) = 0.0
 Identities = 148/189 (78%), Positives = 158/189 (83%)
 Frame = -1

Query: 1410 MNRWTGMPYSARYFEILEKRKTLPVWLQKDEFLEALMANQILILVGETGSGKTTQIPQFV 1231
            +NRWTG PYSARY EILEKR+TLPVW QKD+FL  L  NQ LILVGETGSGKTTQIPQFV
Sbjct: 43   INRWTGRPYSARYLEILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFV 102

Query: 1230 LEAEGLGKPLVVACTQPXXXXXXXXXXXXAEEMDVILGEEVGYTIRFEDCSSQKTILKYL 1051
            LEAEGL    +VACTQP            AEEMDV +GEEVGY+IRFEDCSS KT+LKYL
Sbjct: 103  LEAEGLSNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYL 162

Query: 1050 TDGMLLREASADPLLERYNVIILDEAHERTLATDVLFGLLKEVLSKRPDLKLVIMSATLE 871
            TDGMLLREA ADPLLERY VI+LDEAHERTLATDVLFGLLKEVL  RPDLKLV+MSATLE
Sbjct: 163  TDGMLLREAMADPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 222

Query: 870  AEKFQDYFN 844
            AEKFQ YF+
Sbjct: 223  AEKFQTYFS 231