BLASTX nr result

ID: Dioscorea21_contig00001045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001045
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39149.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis v...   413   e-113
ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|XP_002446756.1| hypothetical protein SORBIDRAFT_06g021840 [S...   401   e-109
dbj|BAJ96157.1| predicted protein [Hordeum vulgare subsp. vulgare]    400   e-109

>emb|CBI39149.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  413 bits (1061), Expect = e-113
 Identities = 207/259 (79%), Positives = 231/259 (89%)
 Frame = -3

Query: 955 PPFLPPICELGKMQKQRAQALRRILESPGVFQGPACFNALSAKLVEKAGFQYCFTSGFSI 776
           PP      +   + +  A+ LRRIL+SPGV QGPACF+ALSA+LVE+AGFQYCFTSGFSI
Sbjct: 15  PPLSAAYGDQAPLPEAPAKVLRRILDSPGVHQGPACFDALSAQLVERAGFQYCFTSGFSI 74

Query: 775 SAARLGLPDVGLISYGEMLDQGYNITQAVSIPVIGDVDNGYGNEMNVKRTVKGFIQAGFA 596
           SAARLGLPDVGLISYGEMLDQG  ITQAVSIPVIGD DNGYGN MNVKRTVK FI+AGFA
Sbjct: 75  SAARLGLPDVGLISYGEMLDQGRQITQAVSIPVIGDGDNGYGNAMNVKRTVKDFIRAGFA 134

Query: 595 GILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIARTDSRQAISLE 416
           GI+LEDQVSPKACGHTRGRKVVSREEAVMRIKAA+DAR+E+GSDIVI+ARTDSRQA+S +
Sbjct: 135 GIILEDQVSPKACGHTRGRKVVSREEAVMRIKAAIDARKETGSDIVIVARTDSRQAVSFD 194

Query: 415 EALWRSRAFADVGADALFIDALASVEEMKAFCEIAPQLPKMANMLEGGGKTPILSPTELE 236
           E+LWRSRAFA  GAD LFIDAL+S EEMKAFCEIAP +PKMANMLEGGGKTPIL+P ELE
Sbjct: 195 ESLWRSRAFASAGADVLFIDALSSREEMKAFCEIAPFVPKMANMLEGGGKTPILNPIELE 254

Query: 235 EIGFKLACYPLSLIGVSIR 179
           ++G+K+  YPLSLIGVSIR
Sbjct: 255 DVGYKIVVYPLSLIGVSIR 273



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -2

Query: 125 KLACYPLSLIGVSIRAMEDALVAIKGGQVPPPGQLPTFEEI 3
           K+  YPLSLIGVSIRAM+DAL AIKGG++P PG +PTFEEI
Sbjct: 259 KIVVYPLSLIGVSIRAMQDALRAIKGGRIPSPGSMPTFEEI 299


>ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis vinifera]
          Length = 505

 Score =  413 bits (1061), Expect = e-113
 Identities = 207/259 (79%), Positives = 231/259 (89%)
 Frame = -3

Query: 955 PPFLPPICELGKMQKQRAQALRRILESPGVFQGPACFNALSAKLVEKAGFQYCFTSGFSI 776
           PP      +   + +  A+ LRRIL+SPGV QGPACF+ALSA+LVE+AGFQYCFTSGFSI
Sbjct: 71  PPLSAAYGDQAPLPEAPAKVLRRILDSPGVHQGPACFDALSAQLVERAGFQYCFTSGFSI 130

Query: 775 SAARLGLPDVGLISYGEMLDQGYNITQAVSIPVIGDVDNGYGNEMNVKRTVKGFIQAGFA 596
           SAARLGLPDVGLISYGEMLDQG  ITQAVSIPVIGD DNGYGN MNVKRTVK FI+AGFA
Sbjct: 131 SAARLGLPDVGLISYGEMLDQGRQITQAVSIPVIGDGDNGYGNAMNVKRTVKDFIRAGFA 190

Query: 595 GILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIARTDSRQAISLE 416
           GI+LEDQVSPKACGHTRGRKVVSREEAVMRIKAA+DAR+E+GSDIVI+ARTDSRQA+S +
Sbjct: 191 GIILEDQVSPKACGHTRGRKVVSREEAVMRIKAAIDARKETGSDIVIVARTDSRQAVSFD 250

Query: 415 EALWRSRAFADVGADALFIDALASVEEMKAFCEIAPQLPKMANMLEGGGKTPILSPTELE 236
           E+LWRSRAFA  GAD LFIDAL+S EEMKAFCEIAP +PKMANMLEGGGKTPIL+P ELE
Sbjct: 251 ESLWRSRAFASAGADVLFIDALSSREEMKAFCEIAPFVPKMANMLEGGGKTPILNPIELE 310

Query: 235 EIGFKLACYPLSLIGVSIR 179
           ++G+K+  YPLSLIGVSIR
Sbjct: 311 DVGYKIVVYPLSLIGVSIR 329



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -2

Query: 125 KLACYPLSLIGVSIRAMEDALVAIKGGQVPPPGQLPTFEEI 3
           K+  YPLSLIGVSIRAM+DAL AIKGG++P PG +PTFEEI
Sbjct: 315 KIVVYPLSLIGVSIRAMQDALRAIKGGRIPSPGSMPTFEEI 355


>ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|222843360|gb|EEE80907.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  405 bits (1041), Expect = e-111
 Identities = 199/242 (82%), Positives = 224/242 (92%)
 Frame = -3

Query: 904 AQALRRILESPGVFQGPACFNALSAKLVEKAGFQYCFTSGFSISAARLGLPDVGLISYGE 725
           A+ LR IL+SPGV QGPACF+ALSA LV++AGF YCFTSGFSISAA+LGLPD G ISYGE
Sbjct: 85  AKKLRLILDSPGVHQGPACFDALSALLVQRAGFDYCFTSGFSISAAKLGLPDTGFISYGE 144

Query: 724 MLDQGYNITQAVSIPVIGDVDNGYGNEMNVKRTVKGFIQAGFAGILLEDQVSPKACGHTR 545
           M+DQG  ITQAVSIPVIGD DNGYGN MNVKRTVKG+I+AGFAGI+LEDQVSPKACGHTR
Sbjct: 145 MVDQGQQITQAVSIPVIGDADNGYGNPMNVKRTVKGYIRAGFAGIILEDQVSPKACGHTR 204

Query: 544 GRKVVSREEAVMRIKAALDAREESGSDIVIIARTDSRQAISLEEALWRSRAFADVGADAL 365
           GRKVVSREEA+MRIKAA+DAREE+GSDIVI++RTDSRQA+SL+E+LWRSRAFAD GAD L
Sbjct: 205 GRKVVSREEAIMRIKAAVDAREETGSDIVIVSRTDSRQAVSLDESLWRSRAFADAGADVL 264

Query: 364 FIDALASVEEMKAFCEIAPQLPKMANMLEGGGKTPILSPTELEEIGFKLACYPLSLIGVS 185
           FIDALAS EEMK+FCEI+P +PKMANMLEGGGKTPI++P ELEE+G+KL  YPLSLIGVS
Sbjct: 265 FIDALASREEMKSFCEISPLVPKMANMLEGGGKTPIVTPFELEEVGYKLVAYPLSLIGVS 324

Query: 184 IR 179
           IR
Sbjct: 325 IR 326



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 125 KLACYPLSLIGVSIRAMEDALVAIKGGQVPPPGQLPTFEEI 3
           KL  YPLSLIGVSIRAM+D+L AIKGG++PPPG +P+FEEI
Sbjct: 312 KLVAYPLSLIGVSIRAMQDSLAAIKGGRIPPPGSMPSFEEI 352


>ref|XP_002446756.1| hypothetical protein SORBIDRAFT_06g021840 [Sorghum bicolor]
           gi|241937939|gb|EES11084.1| hypothetical protein
           SORBIDRAFT_06g021840 [Sorghum bicolor]
          Length = 493

 Score =  401 bits (1031), Expect = e-109
 Identities = 201/249 (80%), Positives = 224/249 (89%)
 Frame = -3

Query: 925 GKMQKQRAQALRRILESPGVFQGPACFNALSAKLVEKAGFQYCFTSGFSISAARLGLPDV 746
           G  ++  A ALRR+LE+PG  Q PAC++ALSA+LVE+AGF+ CFTSGFSISAARLGLPDV
Sbjct: 66  GGSEELPAAALRRVLETPGAHQAPACYDALSARLVERAGFRACFTSGFSISAARLGLPDV 125

Query: 745 GLISYGEMLDQGYNITQAVSIPVIGDVDNGYGNEMNVKRTVKGFIQAGFAGILLEDQVSP 566
           GLISYGEM+DQG  IT+AVS+PVIGD DNGYGN MNVKRTVKGFI AGFAGI+LEDQVSP
Sbjct: 126 GLISYGEMIDQGRLITEAVSVPVIGDADNGYGNCMNVKRTVKGFINAGFAGIILEDQVSP 185

Query: 565 KACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIARTDSRQAISLEEALWRSRAFA 386
           KACGHT+GRKVVSREEA+M IKAA+DAR ESGSDIVI+ARTDSRQA+SL+EALWR RAFA
Sbjct: 186 KACGHTQGRKVVSREEAIMHIKAAVDARNESGSDIVIVARTDSRQALSLDEALWRVRAFA 245

Query: 385 DVGADALFIDALASVEEMKAFCEIAPQLPKMANMLEGGGKTPILSPTELEEIGFKLACYP 206
           D GAD LFIDALAS EEMKAFC IAP +PKMANMLEGGGKTPILSP ELEEIG+K+  YP
Sbjct: 246 DAGADLLFIDALASREEMKAFCAIAPGVPKMANMLEGGGKTPILSPVELEEIGYKIIAYP 305

Query: 205 LSLIGVSIR 179
           LSLIGVS+R
Sbjct: 306 LSLIGVSMR 314



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 125 KLACYPLSLIGVSIRAMEDALVAIKGGQVPPPGQLPTFEEI 3
           K+  YPLSLIGVS+RAMEDAL+AIKGG++PPP  LP+FEEI
Sbjct: 300 KIIAYPLSLIGVSMRAMEDALIAIKGGRIPPPSSLPSFEEI 340


>dbj|BAJ96157.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 489

 Score =  400 bits (1027), Expect = e-109
 Identities = 198/246 (80%), Positives = 225/246 (91%)
 Frame = -3

Query: 916 QKQRAQALRRILESPGVFQGPACFNALSAKLVEKAGFQYCFTSGFSISAARLGLPDVGLI 737
           ++Q A ALRR+LE+PG  Q PAC++ALSA+LVE+AGF+ CFTSGFSISAARLGLPDVGLI
Sbjct: 65  EEQPAAALRRVLETPGAHQAPACYDALSARLVERAGFRACFTSGFSISAARLGLPDVGLI 124

Query: 736 SYGEMLDQGYNITQAVSIPVIGDVDNGYGNEMNVKRTVKGFIQAGFAGILLEDQVSPKAC 557
           SYGEM+DQG  IT+AVSIPVIGD DNGYGN MNVKRTVKGFI AGFAGI+LEDQVSPKAC
Sbjct: 125 SYGEMIDQGRLITEAVSIPVIGDADNGYGNCMNVKRTVKGFINAGFAGIILEDQVSPKAC 184

Query: 556 GHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIARTDSRQAISLEEALWRSRAFADVG 377
           GHT+GRKVVSREEA+M IKAA+DAR+ESGSDIVI+ARTDSRQA+SL+EALWR+RAFAD G
Sbjct: 185 GHTQGRKVVSREEAIMHIKAAVDARKESGSDIVIVARTDSRQALSLDEALWRARAFADAG 244

Query: 376 ADALFIDALASVEEMKAFCEIAPQLPKMANMLEGGGKTPILSPTELEEIGFKLACYPLSL 197
           AD LFIDALAS EEM AFC ++P +PKMANMLEGGGKTPILSP ELEEIG+K+  YPLSL
Sbjct: 245 ADVLFIDALASREEMMAFCAVSPGVPKMANMLEGGGKTPILSPLELEEIGYKIIAYPLSL 304

Query: 196 IGVSIR 179
           IGV++R
Sbjct: 305 IGVTMR 310



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 125 KLACYPLSLIGVSIRAMEDALVAIKGGQVPPPGQLPTFEEI 3
           K+  YPLSLIGV++RAMEDALVAIKGG++PPP  LP+FEEI
Sbjct: 296 KIIAYPLSLIGVTMRAMEDALVAIKGGRIPPPSSLPSFEEI 336


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