BLASTX nr result

ID: Dioscorea21_contig00001043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001043
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127
ref|XP_003580094.1| PREDICTED: 2,3-dimethylmalate lyase-like [Br...   443   e-122
gb|ABN08672.1| Isocitrate lyase and phosphorylmutase [Medicago t...   442   e-122
ref|XP_003621025.1| Isocitrate lyase [Medicago truncatula] gi|35...   437   e-120
emb|CBI39149.3| unnamed protein product [Vitis vinifera]              437   e-120

>ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|222843360|gb|EEE80907.1|
            predicted protein [Populus trichocarpa]
          Length = 504

 Score =  460 bits (1184), Expect = e-127
 Identities = 226/331 (68%), Positives = 280/331 (84%), Gaps = 3/331 (0%)
 Frame = -1

Query: 1136 KGYIQAGFAGILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIART 957
            KGYI+AGFAGI+LEDQVSPKACGHTRGRKVVSREEA+MRIKAA+DAREE+GSDIVI++RT
Sbjct: 179  KGYIRAGFAGIILEDQVSPKACGHTRGRKVVSREEAIMRIKAAVDAREETGSDIVIVSRT 238

Query: 956  DSRQAISFEEALWRSRAFADAGVDALFIDALASIEEMKAFCEVTPLLPKVANMLEGGGKT 777
            DSRQA+S +E+LWRSRAFADAG D LFIDALAS EEMK+FCE++PL+PK+ANMLEGGGKT
Sbjct: 239  DSRQAVSLDESLWRSRAFADAGADVLFIDALASREEMKSFCEISPLVPKMANMLEGGGKT 298

Query: 776  PILSPIELEEIGFKLVAYPLSLIGVSIRAMEDALVAIKGGRIPPPGQLPTFDEIKDIVGF 597
            PI++P ELEE+G+KLVAYPLSLIGVSIRAM+D+L AIKGGRIPPPG +P+F+EIKDI+GF
Sbjct: 299  PIVTPFELEEVGYKLVAYPLSLIGVSIRAMQDSLAAIKGGRIPPPGSMPSFEEIKDILGF 358

Query: 596  NDYYKEEERYSVGSAQTSSQR---SYFSARSTSGEGTEQSAEKPYQPDVEVLAPYPSNSS 426
            N YY+EE++Y++ S+Q + QR   + +  +  + + TEQ ++ P  P VEV+ P      
Sbjct: 359  NTYYEEEKQYAISSSQMARQRASSNVYGIQRRTPDYTEQRSQSPQDPVVEVITPEVYGGY 418

Query: 425  RSNDPRGRLSGIWSRTLRIKITGRDGLEKLDIRIPAGFLDGISGVIPGLGGRNIIEMLED 246
             +++ RG  SGIWSRTLR+KITGRDG EKLD+RIPAGFL+GI+ ++P LGG NI  +L+D
Sbjct: 419  GADNSRGPFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLEGITNIVPALGGVNIKGLLDD 478

Query: 245  ASVNVNDGTERGKVLLDFNDTMGDRIQVFLE 153
            A+  V      GK+LLDFNDT+GDRIQVFLE
Sbjct: 479  AAEEVG-----GKLLLDFNDTVGDRIQVFLE 504


>ref|XP_003580094.1| PREDICTED: 2,3-dimethylmalate lyase-like [Brachypodium distachyon]
          Length = 488

 Score =  443 bits (1139), Expect = e-122
 Identities = 225/330 (68%), Positives = 271/330 (82%), Gaps = 3/330 (0%)
 Frame = -1

Query: 1136 KGYIQAGFAGILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIART 957
            KG+I AGFAGI+LEDQVSPKACGHT+GRKVVSREEA+M IKAA+DAR+ESGSDIVI+ART
Sbjct: 162  KGFINAGFAGIILEDQVSPKACGHTQGRKVVSREEAIMHIKAAVDARKESGSDIVIVART 221

Query: 956  DSRQAISFEEALWRSRAFADAGVDALFIDALASIEEMKAFCEVTPLLPKVANMLEGGGKT 777
            DSRQA+S +EALWR+RAFADAG D LFIDAL S EEMKAFC V+P LPK+ANMLEGGGKT
Sbjct: 222  DSRQALSLDEALWRARAFADAGADVLFIDALVSREEMKAFCAVSPGLPKMANMLEGGGKT 281

Query: 776  PILSPIELEEIGFKLVAYPLSLIGVSIRAMEDALVAIKGGRIPPPGQLPTFDEIKDIVGF 597
            PILSP+ELEE G+KLVAYPLSLIGVS+RAMEDALVAIKGGRIPPPG LP+F+EIKD +GF
Sbjct: 282  PILSPVELEETGYKLVAYPLSLIGVSMRAMEDALVAIKGGRIPPPGSLPSFEEIKDTLGF 341

Query: 596  NDYYKEEERYSVGSAQTSSQRSYFSARSTSGEG--TEQSAEKPYQPDVEVLAP-YPSNSS 426
            N YY+EE++Y V  AQ+S +  Y+   S +G    T+   EK  +P +++L   Y   SS
Sbjct: 342  NHYYEEEKQYIVTPAQSSYRSGYYDYTSEAGSSGDTKSRTEKSQEPIIDILPQLYDLGSS 401

Query: 425  RSNDPRGRLSGIWSRTLRIKITGRDGLEKLDIRIPAGFLDGISGVIPGLGGRNIIEMLED 246
               D   R SG+WSRTLR+KITGRDG++K+D RIPAGFL+G++ VIPGL G NI+E L D
Sbjct: 402  GGRD---RSSGMWSRTLRLKITGRDGIQKIDARIPAGFLEGMTNVIPGLAGANILERLRD 458

Query: 245  ASVNVNDGTERGKVLLDFNDTMGDRIQVFL 156
            A ++ +D  + G++LLDF D MGDRIQVF+
Sbjct: 459  APID-SDNPQNGQILLDFEDGMGDRIQVFI 487


>gb|ABN08672.1| Isocitrate lyase and phosphorylmutase [Medicago truncatula]
          Length = 478

 Score =  442 bits (1136), Expect = e-122
 Identities = 225/331 (67%), Positives = 272/331 (82%), Gaps = 3/331 (0%)
 Frame = -1

Query: 1136 KGYIQAGFAGILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIART 957
            KGY+ AGFAGI+LEDQVSPKACGHT+GRKVVSREEAVMRIKAA+DAR ESGSDIVI+ART
Sbjct: 154  KGYVNAGFAGIILEDQVSPKACGHTQGRKVVSREEAVMRIKAAVDARNESGSDIVIVART 213

Query: 956  DSRQAISFEEALWRSRAFADAGVDALFIDALASIEEMKAFCEVTPLLPKVANMLEGGGKT 777
            D+RQA+S +EAL+RSRAFADAG D +FIDALAS +EM+AFC+V+PL+PK+ANMLEGGGKT
Sbjct: 214  DARQALSLDEALYRSRAFADAGADVVFIDALASRQEMEAFCQVSPLVPKMANMLEGGGKT 273

Query: 776  PILSPIELEEIGFKLVAYPLSLIGVSIRAMEDALVAIKGGRIPPPGQLPTFDEIKDIVGF 597
            PIL+P+ELE+IG+K+VAYPLSLIGVSIRAM+DAL AIKGGRIPPPG +PTF+EIKD +GF
Sbjct: 274  PILTPLELEDIGYKIVAYPLSLIGVSIRAMQDALTAIKGGRIPPPGSMPTFEEIKDTLGF 333

Query: 596  NDYYKEEERYSVGSAQTSSQR---SYFSARSTSGEGTEQSAEKPYQPDVEVLAPYPSNSS 426
            N YY+EE+RY+  + Q  S+R   S +S +      TEQ+++    P VEV+ P   N  
Sbjct: 334  NAYYEEEKRYATSTDQLLSKRESSSVYSIQQREQVDTEQTSQTIEDPIVEVITPDVYNKY 393

Query: 425  RSNDPRGRLSGIWSRTLRIKITGRDGLEKLDIRIPAGFLDGISGVIPGLGGRNIIEMLED 246
             ++  R   SGIWSRTLRIKITGRDG+EKLD+RIPAGFLDGI+  +P LGG N+ ++L+D
Sbjct: 394  GADGSRDPFSGIWSRTLRIKITGRDGVEKLDLRIPAGFLDGITNTVPALGGVNLKKLLDD 453

Query: 245  ASVNVNDGTERGKVLLDFNDTMGDRIQVFLE 153
            A+       E G  LLDFND MGDRIQVFLE
Sbjct: 454  AT------DEIGGKLLDFNDRMGDRIQVFLE 478


>ref|XP_003621025.1| Isocitrate lyase [Medicago truncatula] gi|355496040|gb|AES77243.1|
            Isocitrate lyase [Medicago truncatula]
          Length = 467

 Score =  437 bits (1125), Expect = e-120
 Identities = 223/328 (67%), Positives = 267/328 (81%)
 Frame = -1

Query: 1136 KGYIQAGFAGILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIART 957
            KGY+ AGFAGI+LEDQVSPKACGHT+GRKVVSREEAVMRIKAA+DAR ESGSDIVI+ART
Sbjct: 154  KGYVNAGFAGIILEDQVSPKACGHTQGRKVVSREEAVMRIKAAVDARNESGSDIVIVART 213

Query: 956  DSRQAISFEEALWRSRAFADAGVDALFIDALASIEEMKAFCEVTPLLPKVANMLEGGGKT 777
            D+RQA+S +EAL+RSRAFADAG D +FIDALAS +EM+AFC+V+PL+PK+ANMLEGGGKT
Sbjct: 214  DARQALSLDEALYRSRAFADAGADVVFIDALASRQEMEAFCQVSPLVPKMANMLEGGGKT 273

Query: 776  PILSPIELEEIGFKLVAYPLSLIGVSIRAMEDALVAIKGGRIPPPGQLPTFDEIKDIVGF 597
            PIL+P+ELE+IG+K+VAYPLSLIGVSIRAM+DAL AIKGGRIPPPG +PTF+EIKD +GF
Sbjct: 274  PILTPLELEDIGYKIVAYPLSLIGVSIRAMQDALTAIKGGRIPPPGSMPTFEEIKDTLGF 333

Query: 596  NDYYKEEERYSVGSAQTSSQRSYFSARSTSGEGTEQSAEKPYQPDVEVLAPYPSNSSRSN 417
            N YY+EE+RY+  + Q   QR            TEQ+++    P VEV+ P   N   ++
Sbjct: 334  NAYYEEEKRYATSTDQLIQQREQVD--------TEQTSQTIEDPIVEVITPDVYNKYGAD 385

Query: 416  DPRGRLSGIWSRTLRIKITGRDGLEKLDIRIPAGFLDGISGVIPGLGGRNIIEMLEDASV 237
              R   SGIWSRTLRIKITGRDG+EKLD+RIPAGFLDGI+  +P LGG N+ ++L+DA+ 
Sbjct: 386  GSRDPFSGIWSRTLRIKITGRDGVEKLDLRIPAGFLDGITNTVPALGGVNLKKLLDDAT- 444

Query: 236  NVNDGTERGKVLLDFNDTMGDRIQVFLE 153
                  E G  LLDFND MGDRIQVFLE
Sbjct: 445  -----DEIGGKLLDFNDRMGDRIQVFLE 467


>emb|CBI39149.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  437 bits (1125), Expect = e-120
 Identities = 221/334 (66%), Positives = 272/334 (81%), Gaps = 6/334 (1%)
 Frame = -1

Query: 1136 KGYIQAGFAGILLEDQVSPKACGHTRGRKVVSREEAVMRIKAALDAREESGSDIVIIART 957
            K +I+AGFAGI+LEDQVSPKACGHTRGRKVVSREEAVMRIKAA+DAR+E+GSDIVI+ART
Sbjct: 126  KDFIRAGFAGIILEDQVSPKACGHTRGRKVVSREEAVMRIKAAIDARKETGSDIVIVART 185

Query: 956  DSRQAISFEEALWRSRAFADAGVDALFIDALASIEEMKAFCEVTPLLPKVANMLEGGGKT 777
            DSRQA+SF+E+LWRSRAFA AG D LFIDAL+S EEMKAFCE+ P +PK+ANMLEGGGKT
Sbjct: 186  DSRQAVSFDESLWRSRAFASAGADVLFIDALSSREEMKAFCEIAPFVPKMANMLEGGGKT 245

Query: 776  PILSPIELEEIGFKLVAYPLSLIGVSIRAMEDALVAIKGGRIPPPGQLPTFDEIKDIVGF 597
            PIL+PIELE++G+K+V YPLSLIGVSIRAM+DAL AIKGGRIP PG +PTF+EIK+ +GF
Sbjct: 246  PILNPIELEDVGYKIVVYPLSLIGVSIRAMQDALRAIKGGRIPSPGSMPTFEEIKETLGF 305

Query: 596  NDYYKEEERYSVGSAQTSSQR---SYFSARSTSGEGTEQSAEKPYQPDVEVLAP---YPS 435
            N YY+EE+RY+    Q S QR   + +S++  + + T+Q  +    P VEVL P   Y  
Sbjct: 306  NSYYEEEKRYATSKGQVSWQRASSNTYSSQQRAQDDTQQRGQNSQDPVVEVLTPDAYYGP 365

Query: 434  NSSRSNDPRGRLSGIWSRTLRIKITGRDGLEKLDIRIPAGFLDGISGVIPGLGGRNIIEM 255
            + S+        +GIWSRTLRIKITGRDG++KLD+RIPAGFL+GI+ ++P LGG NI E+
Sbjct: 366  DGSKV-----PFAGIWSRTLRIKITGRDGIDKLDVRIPAGFLEGITNIVPALGGVNIKEL 420

Query: 254  LEDASVNVNDGTERGKVLLDFNDTMGDRIQVFLE 153
            L+DA+  +      GK+L+DFND MGDRIQVFLE
Sbjct: 421  LDDAAEELG-----GKLLIDFNDAMGDRIQVFLE 449


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