BLASTX nr result

ID: Dioscorea21_contig00001004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001004
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   217   7e-55
gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Goss...   215   3e-54
ref|XP_002519950.1| chlorophyll A/B binding protein, putative [R...   215   3e-54
gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia...   214   4e-54
gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicu...   213   1e-53

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/111 (90%), Positives = 105/111 (94%)
 Frame = +3

Query: 9   APPTFVDEELAKWYGPDRRIYLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKNPENFTK 188
           AP +  DEELAKWYGPDRRI+LPEGLLDRSE+P YLTGEVPGDYGYDPFGLSK PE+F K
Sbjct: 60  APVSPADEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAK 119

Query: 189 YRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 341
           Y+AYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
Sbjct: 120 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 170


>gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
          Length = 240

 Score =  215 bits (548), Expect = 3e-54
 Identities = 98/105 (93%), Positives = 102/105 (97%)
 Frame = +3

Query: 27  DEELAKWYGPDRRIYLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKNPENFTKYRAYEL 206
           DEELAKWYGPDRRI+LPEGLLDRSE+PEYL GEVPGDYGYDPFGLSK PE+F KY+AYEL
Sbjct: 67  DEELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 126

Query: 207 IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 341
           IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
Sbjct: 127 IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 171


>ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223540996|gb|EEF42554.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 292

 Score =  215 bits (547), Expect = 3e-54
 Identities = 97/106 (91%), Positives = 103/106 (97%)
 Frame = +3

Query: 24  VDEELAKWYGPDRRIYLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKNPENFTKYRAYE 203
           VD+ELAKWYGPDRRI+LPEGLLDRSE+PEYLTGEVPGDYGYDPFGLSK PE+F KY+AYE
Sbjct: 67  VDDELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYE 126

Query: 204 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 341
           LIHARWAMLGAAGFI+PEAFNKFGANCGPEAVWFKTGALLLDG TL
Sbjct: 127 LIHARWAMLGAAGFIVPEAFNKFGANCGPEAVWFKTGALLLDGGTL 172


>gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
          Length = 279

 Score =  214 bits (546), Expect = 4e-54
 Identities = 98/112 (87%), Positives = 104/112 (92%)
 Frame = +3

Query: 6   KAPPTFVDEELAKWYGPDRRIYLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKNPENFT 185
           KAPP   ++ELAKWYGPDRRI+LP+GLLDRSEVP YL GEVPGDYGYDPFGL K PE+F 
Sbjct: 48  KAPPPPANDELAKWYGPDRRIFLPDGLLDRSEVPAYLNGEVPGDYGYDPFGLGKKPEDFA 107

Query: 186 KYRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 341
           KY+AYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
Sbjct: 108 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 159


>gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
          Length = 287

 Score =  213 bits (543), Expect = 1e-53
 Identities = 96/106 (90%), Positives = 103/106 (97%)
 Frame = +3

Query: 24  VDEELAKWYGPDRRIYLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKNPENFTKYRAYE 203
           +D+ELAKWYGPDRRI+LPEGLLD+SE+PEYL GEVPGDYGYDPFGLSK PE+F KY+AYE
Sbjct: 62  LDDELAKWYGPDRRIFLPEGLLDKSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYE 121

Query: 204 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 341
           LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
Sbjct: 122 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 167


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