BLASTX nr result
ID: Dioscorea21_contig00000823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000823
(948 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,... 106 3e-38
ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containin... 100 2e-36
emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera] 105 2e-36
ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin... 105 2e-36
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin... 105 2e-36
>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
communis] gi|223547687|gb|EEF49180.1| arginine/serine
rich splicing factor sf4/14, putative [Ricinus communis]
Length = 441
Score = 106 bits (265), Expect(2) = 3e-38
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -1
Query: 162 PSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTSCMDYKYYE 4
PSDP VKKVADKLASFVAKNGRQFEHITRQ+NPGDTPFKFLFD +C DYKYYE
Sbjct: 142 PSDPTVKKVADKLASFVAKNGRQFEHITRQKNPGDTPFKFLFDKTCSDYKYYE 194
Score = 79.3 bits (194), Expect(2) = 3e-38
Identities = 58/142 (40%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Frame = -2
Query: 653 MEKKADPSLFVNDGSFMERFKQLQQE-----QLDQMSKE----PKNSAASTAVPYPPKSG 501
M+KKA +LFVNDGSFMERFKQLQQE + D+++ E PK + T P P
Sbjct: 1 MDKKAPSTLFVNDGSFMERFKQLQQEKGMDPEKDKLAVEKESKPKTIISGTLAPKPS--- 57
Query: 500 LIMGKRPLDVKATEXXXXXXXXXNVKLAFSLKQKSKIAVAPVKXXXXXXXXXXXXXLTSS 321
GK L KA KLAFSLKQKSKI VK S
Sbjct: 58 --TGKISLQFKANNANKTPQPPSGGKLAFSLKQKSKIVTPVVK--LGEDEDDADVGNVSG 113
Query: 320 EQSGKKQKLDESTESSMEQKDV 255
+ S K+QKL +S S + K V
Sbjct: 114 DASAKRQKLSQSDSSELSSKQV 135
>ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
protein-like [Glycine max]
Length = 436
Score = 100 bits (249), Expect(2) = 2e-36
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = -1
Query: 162 PSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTSCMDYKYYE 4
PSDP VKKVADKLASFVAKNGRQFE +TRQ+NPGDTPFKFLFD C +YKYYE
Sbjct: 140 PSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYE 192
Score = 79.3 bits (194), Expect(2) = 2e-36
Identities = 56/140 (40%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Frame = -2
Query: 653 MEKKADPSLFVNDGSFMERFKQLQQEQLDQMSKEPKNSAASTAVPYPPKSGLI-----MG 489
M+K PSLFVNDGSFMERFKQLQQEQ + KN + P SG +
Sbjct: 1 MDKGVPPSLFVNDGSFMERFKQLQQEQ-----DKGKNVKLEDSKPIKVISGSLSPNPSFT 55
Query: 488 KRPLDVKATEXXXXXXXXXNVKLAFSLKQKSKIAVAPVKXXXXXXXXXXXXXLTSSEQSG 309
K P+D+K + + KLAFSLKQKSK+ PVK S++
Sbjct: 56 KTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYVSNDAPL 115
Query: 308 KKQKL--DESTESSMEQKDV 255
K+QKL +E + S Q DV
Sbjct: 116 KRQKLGQEEGIDQSSRQLDV 135
>emb|CAN62489.1| hypothetical protein VITISV_035536 [Vitis vinifera]
Length = 473
Score = 105 bits (261), Expect(2) = 2e-36
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = -1
Query: 162 PSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTSCMDYKYYE 4
PSDPAVKKVADKLASFVAKNGRQFE +TRQRNPGDTPFKFLFD C DYKYYE
Sbjct: 142 PSDPAVKKVADKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYE 194
Score = 74.3 bits (181), Expect(2) = 2e-36
Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Frame = -2
Query: 653 MEKKADPSLFVNDGSFMERFKQLQQEQLDQMSK-----EPKN----SAASTAVPYPPKSG 501
MEK A PSLFVNDGSFMERFKQLQQE + K EPK A ST P K+
Sbjct: 1 MEKGAAPSLFVNDGSFMERFKQLQQENEKEKGKGAKLEEPKQRMVVPATSTPNSIPSKTN 60
Query: 500 LIM---GKRPLDVKATEXXXXXXXXXNVKLAFSLKQKSKIAVAPVKXXXXXXXXXXXXXL 330
+ G R + A KLAFSLKQKSK+ PVK
Sbjct: 61 NVSKTNGTRKTPLAAPNG----------KLAFSLKQKSKLVPPPVKLGADEDEEETDAGN 110
Query: 329 TSSEQSGKKQKL--DESTESSMEQKDV 255
SS+ K+QKL +S+E Q DV
Sbjct: 111 LSSDAPMKRQKLGQKDSSEHPSPQVDV 137
>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
protein-like isoform 1 [Vitis vinifera]
Length = 459
Score = 105 bits (261), Expect(2) = 2e-36
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = -1
Query: 162 PSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTSCMDYKYYE 4
PSDPAVKKVADKLASFVAKNGRQFE +TRQRNPGDTPFKFLFD C DYKYYE
Sbjct: 157 PSDPAVKKVADKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYE 209
Score = 74.3 bits (181), Expect(2) = 2e-36
Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Frame = -2
Query: 653 MEKKADPSLFVNDGSFMERFKQLQQEQLDQMSK-----EPKN----SAASTAVPYPPKSG 501
MEK A PSLFVNDGSFMERFKQLQQE + K EPK A ST P K+
Sbjct: 16 MEKGAAPSLFVNDGSFMERFKQLQQENEKEKGKGAKLEEPKQRMVVPATSTPNSIPSKTN 75
Query: 500 LIM---GKRPLDVKATEXXXXXXXXXNVKLAFSLKQKSKIAVAPVKXXXXXXXXXXXXXL 330
+ G R + A KLAFSLKQKSK+ PVK
Sbjct: 76 NVSKTNGTRKTPLAAPNG----------KLAFSLKQKSKLVPPPVKLGADEDEEETDAGN 125
Query: 329 TSSEQSGKKQKL--DESTESSMEQKDV 255
SS+ K+QKL +S+E Q DV
Sbjct: 126 LSSDAPMKRQKLGQKDSSEHPSPQVDV 152
>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
protein-like isoform 2 [Vitis vinifera]
gi|297736220|emb|CBI24858.3| unnamed protein product
[Vitis vinifera]
Length = 444
Score = 105 bits (261), Expect(2) = 2e-36
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = -1
Query: 162 PSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTSCMDYKYYE 4
PSDPAVKKVADKLASFVAKNGRQFE +TRQRNPGDTPFKFLFD C DYKYYE
Sbjct: 142 PSDPAVKKVADKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYE 194
Score = 74.3 bits (181), Expect(2) = 2e-36
Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Frame = -2
Query: 653 MEKKADPSLFVNDGSFMERFKQLQQEQLDQMSK-----EPKN----SAASTAVPYPPKSG 501
MEK A PSLFVNDGSFMERFKQLQQE + K EPK A ST P K+
Sbjct: 1 MEKGAAPSLFVNDGSFMERFKQLQQENEKEKGKGAKLEEPKQRMVVPATSTPNSIPSKTN 60
Query: 500 LIM---GKRPLDVKATEXXXXXXXXXNVKLAFSLKQKSKIAVAPVKXXXXXXXXXXXXXL 330
+ G R + A KLAFSLKQKSK+ PVK
Sbjct: 61 NVSKTNGTRKTPLAAPNG----------KLAFSLKQKSKLVPPPVKLGADEDEEETDAGN 110
Query: 329 TSSEQSGKKQKL--DESTESSMEQKDV 255
SS+ K+QKL +S+E Q DV
Sbjct: 111 LSSDAPMKRQKLGQKDSSEHPSPQVDV 137