BLASTX nr result

ID: Dioscorea21_contig00000774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000774
         (2217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-30
ref|XP_002531290.1| protein with unknown function [Ricinus commu...    82   9e-30
ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783...    79   2e-28
ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-28
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...    77   3e-27

>ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|222838055|gb|EEE76420.1|
            predicted protein [Populus trichocarpa]
          Length = 1685

 Score = 83.2 bits (204), Expect(2) = 3e-30
 Identities = 41/68 (60%), Positives = 46/68 (67%), Gaps = 17/68 (25%)
 Frame = +2

Query: 1772 PDVEGVGLRTPSSNLWFRLP-----------------GSM*WDVKINDKHFRELWELQKG 1900
            P VE VGLR  SSN+WFRLP                 GSM WDVKIND+HFR+LWELQKG
Sbjct: 848  PYVEEVGLRNASSNIWFRLPYARGDSWQHICLRLGRPGSMYWDVKINDQHFRDLWELQKG 907

Query: 1901 STTTPWGS 1924
            S++TPWGS
Sbjct: 908  SSSTPWGS 915



 Score = 77.4 bits (189), Expect(2) = 3e-30
 Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
 Frame = +3

Query: 1341 RNSPIQRLSMPKPDQDPSSHKSPHPSELGPCPAKEEGQSNFMLKCPKEIGVMTASRQSRL 1520
            R + +++LS  K DQD SS +SPH        + E    N M     ++G+         
Sbjct: 702  RTTAVKKLSASKSDQDLSSLRSPH--------SVEYQMGNLMEPEALQLGLKRTVADMLS 753

Query: 1521 LSPLL----TTGVLICEREGKLWIHLVPVRVMCSRFSSVLSVKHDEYVYGSLLSEANRGA 1688
            L P L      G            H   V       S ++S K++ Y YG+L++EAN+G 
Sbjct: 754  LIPALQDLDAKGGFSKRGRTSESAHFQQVSSKMLVSSDMVS-KNERYSYGNLIAEANKGN 812

Query: 1689 VLSNIYVSAFLHVIRNCSLCIKYARLISQM 1778
              S+IYVSA LHV+R+CSLCIK+ARL SQM
Sbjct: 813  APSSIYVSALLHVVRHCSLCIKHARLTSQM 842


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score = 82.0 bits (201), Expect(2) = 9e-30
 Identities = 41/68 (60%), Positives = 45/68 (66%), Gaps = 17/68 (25%)
 Frame = +2

Query: 1772 PDVEGVGLRTPSSNLWFRLP-----------------GSM*WDVKINDKHFRELWELQKG 1900
            P VE VGLR  SSN+WFRLP                 GSM WDVKIND+HFR+LWELQKG
Sbjct: 909  PYVEEVGLRNASSNIWFRLPFARGDSWQHICLRLGRPGSMYWDVKINDQHFRDLWELQKG 968

Query: 1901 STTTPWGS 1924
            S+ TPWGS
Sbjct: 969  SSGTPWGS 976



 Score = 77.0 bits (188), Expect(2) = 9e-30
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
 Frame = +3

Query: 1341 RNSPIQRLSMPKPDQDPSSHKSPHPSELGPCPAKEEGQSNF----MLKCPKEIGVMTASR 1508
            RN+ I++L   K DQD +S +SPH  E+    A +    +F    + K  K     T S 
Sbjct: 753  RNTTIRKLPASKSDQDLASLRSPHSVEVAQA-AGDNAICHFPGHNVSKHDKNPRKRTVSD 811

Query: 1509 QSRLLSPLLTTGVLICEREGKLWIHLVPVRVMCSRFSSV--LSVKHDEYVYGSLLSEANR 1682
                +  L      +   + +     V  +   ++   +  ++ KH+ Y YG L++EAN+
Sbjct: 812  MLNFIPSLQNIDAQVGFAKRRRTSESVHSQQHSAKILILPEIAFKHEGYSYGDLIAEANK 871

Query: 1683 GAVLSNIYVSAFLHVIRNCSLCIKYARLISQM 1778
            G   S+IYVSA LHV+R+CSLCIK+ARL SQM
Sbjct: 872  GNAPSSIYVSALLHVVRHCSLCIKHARLTSQM 903


>ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783484 [Glycine max]
          Length = 1718

 Score = 79.0 bits (193), Expect(2) = 2e-28
 Identities = 39/66 (59%), Positives = 43/66 (65%), Gaps = 17/66 (25%)
 Frame = +2

Query: 1778 VEGVGLRTPSSNLWFRLP-----------------GSM*WDVKINDKHFRELWELQKGST 1906
            VE VGLR+ SSN+WFRLP                 G M WDVKIND+HFR+LWELQKGS 
Sbjct: 889  VEEVGLRSGSSNIWFRLPLARGDSWQHICLRLGRPGCMYWDVKINDQHFRDLWELQKGSN 948

Query: 1907 TTPWGS 1924
             TPWGS
Sbjct: 949  NTPWGS 954



 Score = 75.9 bits (185), Expect(2) = 2e-28
 Identities = 60/175 (34%), Positives = 86/175 (49%), Gaps = 29/175 (16%)
 Frame = +3

Query: 1341 RNSPIQRLSMPKPDQDPSSHKSPHPSELGPCPAKEEGQ-------SNFML---------- 1469
            RNS  ++LS  K +QD +S KSPH  ++    A +E Q       SN  L          
Sbjct: 707  RNSAGKKLSASKSEQDLASLKSPHSVDISSSSAMDEEQLRLLSDTSNDALSGTQTLESTV 766

Query: 1470 ----------KCPKEIGVMTASRQSRLLSPL--LTTGVLICEREGKLWIHLVPVRVMCSR 1613
                      K  K+    TAS    L+  L  + +   IC+R          + +    
Sbjct: 767  SYNTGEDVTSKNDKKSRKRTASDMLTLIPSLQGVESNPGICKRRKISDSSGCQLSLPQGV 826

Query: 1614 FSSVLSVKHDEYVYGSLLSEANRGAVLSNIYVSAFLHVIRNCSLCIKYARLISQM 1778
             S+ +  K + Y YGSL++E N+G V S+IY++A LHV+R+CSLCIK+ARL SQM
Sbjct: 827  MSAEMIPKKEGYSYGSLIAEVNKGNVPSSIYIAALLHVVRHCSLCIKHARLTSQM 881


>ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|222858017|gb|EEE95564.1|
            predicted protein [Populus trichocarpa]
          Length = 1740

 Score = 82.4 bits (202), Expect(2) = 5e-28
 Identities = 41/68 (60%), Positives = 46/68 (67%), Gaps = 17/68 (25%)
 Frame = +2

Query: 1772 PDVEGVGLRTPSSNLWFRLP-----------------GSM*WDVKINDKHFRELWELQKG 1900
            P VE VGLR+ SSN+WFRLP                 GSM WDVKIND+HFR+LWELQKG
Sbjct: 906  PYVEEVGLRSASSNIWFRLPLARGDSWQHICLRLGRPGSMHWDVKINDQHFRDLWELQKG 965

Query: 1901 STTTPWGS 1924
            S+ TPWGS
Sbjct: 966  SSGTPWGS 973



 Score = 70.9 bits (172), Expect(2) = 5e-28
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
 Frame = +3

Query: 1341 RNSPIQRLSMPKPDQDPSSHKSPHPSELGPCPAKEEGQSNFMLKCPKE------------ 1484
            R + ++ LS  K DQD SS +S H  E+G   A ++     +    K+            
Sbjct: 734  RTTAVKILSASKSDQDLSSLRSQHLVEVGTNSAMDDDHLRLLNDASKDALSGIRPSRFHD 793

Query: 1485 IGVMTASRQSRLLSPLLTTGVLICEREGKLWIHLVPVRVMCSRFSSVLS---------VK 1637
            + +   + + R +  +L+    + + + K            + F  V S          K
Sbjct: 794  VSIHEKNPRKRTVLDMLSMIPSLQDIDAKAGFSKRRRTSESAHFQKVSSQMLVSSEMVYK 853

Query: 1638 HDEYVYGSLLSEANRGAVLSNIYVSAFLHVIRNCSLCIKYARLISQM 1778
            ++ Y YG+L++EAN+G   SNIYVSA LH++R+CSL IK+ARL SQM
Sbjct: 854  NERYSYGNLIAEANKGNSPSNIYVSALLHMVRHCSLSIKHARLTSQM 900


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score = 77.0 bits (188), Expect(2) = 3e-27
 Identities = 40/68 (58%), Positives = 43/68 (63%), Gaps = 17/68 (25%)
 Frame = +2

Query: 1772 PDVEGVGLRTPSSNLWFRLP-----------------GSM*WDVKINDKHFRELWELQKG 1900
            P VE VGLR  SSNLWFRLP                 GSM WDVKI D+HFR+LWELQKG
Sbjct: 919  PYVEEVGLRNASSNLWFRLPFSSGDSWQHICLRLGRPGSMYWDVKIIDQHFRDLWELQKG 978

Query: 1901 STTTPWGS 1924
            S+ T WGS
Sbjct: 979  SSNTTWGS 986



 Score = 73.6 bits (179), Expect(2) = 3e-27
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
 Frame = +3

Query: 1341 RNSPIQRLSMPKPDQDPSSHKSPHPSELGPCPAKEEGQSNFMLKCPKE------------ 1484
            R++  ++LS  K DQD +S +SPH  E+G     +E     +    KE            
Sbjct: 739  RSAAGKKLSASKSDQDLASLRSPHSLEIGSGTTMDEDHLRLLSDSSKEAVSGTQAPDSAN 798

Query: 1485 --------IGVMTASRQSRLLSPLLTTGVLICEREGKLWIH-----------LVPVRVMC 1607
                    +       + R +S +L     +   E     +           L P+    
Sbjct: 799  FHGSSHDVVSKQDTHSRKRSVSDMLDLIPSLQNLEANTRFYKRRKISESAHTLQPLSQ-- 856

Query: 1608 SRFSSVLSVKHDEYVYGSLLSEANRGAVLSNIYVSAFLHVIRNCSLCIKYARLISQM 1778
            +  SS ++ K + Y YG+L++EAN+G   S++YVSA LHV+R+CSLCIK+ARL SQM
Sbjct: 857  ALISSEIACKTEGYSYGNLIAEANKGNAPSSVYVSALLHVVRHCSLCIKHARLTSQM 913


Top