BLASTX nr result

ID: Dioscorea21_contig00000695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000695
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]   103   1e-20
gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanu...   102   2e-20
emb|CBI17057.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002264645.1| PREDICTED: 60S acidic ribosomal protein P2B ...   100   1e-19
ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...   100   2e-19

>gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]
          Length = 112

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = +3

Query: 108 MKVLAAYLLAVYGGNSSPSADDLKEILASVGAEADDDRINFLLSEVKGKDITELIAIGRE 287
           MKV+AAYLLAV GGN+ PSADDLK+IL SVGAEADDDRI  LLSEVKGKDITELIA GRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPSADDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 288 KF 293
           KF
Sbjct: 61  KF 62


>gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanum tuberosum]
          Length = 115

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/115 (52%), Positives = 66/115 (57%)
 Frame = +3

Query: 108 MKVLAAYLLAVYGGNSSPSADDLKEILASVGAEADDDRINFLLSEVKGKDITELIAIGRE 287
           MKV+A+YLLAV GGN+SPSA DLK+ILASVGAEADDDRI  LLS+VKGKDITELIA GRE
Sbjct: 1   MKVIASYLLAVLGGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGRE 60

Query: 288 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 452
           K                                            D+DMGFSLFD
Sbjct: 61  KLASVPAGGGGGVAVAVSGGGGGGAAAPAAEEKKVEKKVEEKEESDDDMGFSLFD 115


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 99  YSKMKVLAAYLLAVYGGNSSPSADDLKEILASVGAEADDDRINFLLSEVKGKDITELIAI 278
           + KMKV+AAYLLAV GGN+ PSA+DLK+IL SVGAEADDDRI  LL+EVKGKDITELIA 
Sbjct: 30  HHKMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIAS 89

Query: 279 GREK 290
           GREK
Sbjct: 90  GREK 93


>ref|XP_002264645.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|296090429|emb|CBI40248.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  100 bits (249), Expect = 1e-19
 Identities = 60/115 (52%), Positives = 61/115 (53%)
 Frame = +3

Query: 108 MKVLAAYLLAVYGGNSSPSADDLKEILASVGAEADDDRINFLLSEVKGKDITELIAIGRE 287
           MKV+AAYLLA  GGN SP ADDLK IL SVGAEADDD I  LLSEVKGKDITELIA GRE
Sbjct: 1   MKVIAAYLLAALGGNGSPCADDLKSILGSVGAEADDDGIELLLSEVKGKDITELIASGRE 60

Query: 288 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 452
           K                                            DEDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVAAVAASGGGGGGGAAPAATEPKEEKVEEKEESDEDMGFSLFD 115


>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/61 (83%), Positives = 55/61 (90%)
 Frame = +3

Query: 108 MKVLAAYLLAVYGGNSSPSADDLKEILASVGAEADDDRINFLLSEVKGKDITELIAIGRE 287
           MKV+AAYLLAV GGN+ PSA+DLK+IL SVGAEADDDRI  LLSEVKGKDITELIA GRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 288 K 290
           K
Sbjct: 61  K 61


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