BLASTX nr result

ID: Dioscorea21_contig00000604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000604
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycin...   124   8e-27
ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycin...   123   2e-26
ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis t...   120   2e-25
ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arab...   119   5e-25
ref|XP_002310323.1| predicted protein [Populus trichocarpa] gi|1...   118   8e-25

>ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycine max]
           gi|255631866|gb|ACU16300.1| unknown [Glycine max]
          Length = 102

 Score =  124 bits (312), Expect = 8e-27
 Identities = 61/101 (60%), Positives = 66/101 (65%)
 Frame = -3

Query: 513 MASSIARSGFRLGAAACXXXXXXXXXXGFASSAHHDDAYEAAKWEKITYLGIATCTVLSI 334
           MA+S+ RSGF   A              FASS HHDDAYE AKWEKITYLGI +CT L++
Sbjct: 1   MATSLVRSGFLRSALRGSARGSQVPKRNFASSGHHDDAYETAKWEKITYLGIVSCTGLAV 60

Query: 333 YNLSKGHHHSXXXXXXXYLRIRTKEFPWGPDGLFEVKHHSE 211
           YNLSKGH H        YL IR KEFPWGPDGLFE KHH E
Sbjct: 61  YNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKHHEE 101


>ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycine max]
           gi|255626789|gb|ACU13739.1| unknown [Glycine max]
          Length = 102

 Score =  123 bits (309), Expect = 2e-26
 Identities = 61/101 (60%), Positives = 65/101 (64%)
 Frame = -3

Query: 513 MASSIARSGFRLGAAACXXXXXXXXXXGFASSAHHDDAYEAAKWEKITYLGIATCTVLSI 334
           MA+S+ RSGF   A              FASS HHDDAYE AKWEKITYLGI  CT L++
Sbjct: 1   MATSLVRSGFLRSALRGRARSSQVPKRNFASSGHHDDAYETAKWEKITYLGIVGCTGLAV 60

Query: 333 YNLSKGHHHSXXXXXXXYLRIRTKEFPWGPDGLFEVKHHSE 211
           YNLSKGH H        YL IR KEFPWGPDGLFE KHH E
Sbjct: 61  YNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKHHDE 101


>ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
           gi|75213718|sp|Q9T070.1|COX6A_ARATH RecName:
           Full=Cytochrome c oxidase subunit 6a, mitochondrial;
           Short=AtCOX6a; Flags: Precursor
           gi|11908090|gb|AAG41474.1|AF326892_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642898|gb|AAK00391.1|AF339709_1 unknown protein
           [Arabidopsis thaliana]
           gi|14190491|gb|AAK55726.1|AF380645_1
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|4490728|emb|CAB38931.1| putative protein [Arabidopsis
           thaliana] gi|7270766|emb|CAB80448.1| putative protein
           [Arabidopsis thaliana] gi|15810105|gb|AAL06978.1|
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|110737597|dbj|BAF00740.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661442|gb|AEE86842.1|
           cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
          Length = 102

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/101 (56%), Positives = 66/101 (65%)
 Frame = -3

Query: 513 MASSIARSGFRLGAAACXXXXXXXXXXGFASSAHHDDAYEAAKWEKITYLGIATCTVLSI 334
           MA++I RS                    F+SSA HDDAYEAAKWEKITYLGIA+CT L++
Sbjct: 1   MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 333 YNLSKGHHHSXXXXXXXYLRIRTKEFPWGPDGLFEVKHHSE 211
           Y LSKGHHH        ++ IR KEFPWGPDGLFEVKH+ E
Sbjct: 61  YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHNKE 101


>ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
           lyrata] gi|297312766|gb|EFH43189.1| hypothetical protein
           ARALYDRAFT_912546 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  119 bits (297), Expect = 5e-25
 Identities = 58/99 (58%), Positives = 66/99 (66%)
 Frame = -3

Query: 513 MASSIARSGFRLGAAACXXXXXXXXXXGFASSAHHDDAYEAAKWEKITYLGIATCTVLSI 334
           MA++I RS     A              F+SSA HDDAYEAAKWEKITYLGIA+CT L++
Sbjct: 1   MATAIVRSALSRAAIRVAPRTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 333 YNLSKGHHHSXXXXXXXYLRIRTKEFPWGPDGLFEVKHH 217
           Y LSKGHHH        Y+ IR KEFPWGPDGLFEVKH+
Sbjct: 61  YVLSKGHHHGEDPPAYPYMHIRNKEFPWGPDGLFEVKHN 99


>ref|XP_002310323.1| predicted protein [Populus trichocarpa] gi|118487937|gb|ABK95790.1|
           unknown [Populus trichocarpa]
           gi|222853226|gb|EEE90773.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  118 bits (295), Expect = 8e-25
 Identities = 62/104 (59%), Positives = 68/104 (65%)
 Frame = -3

Query: 513 MASSIARSGFRLGAAACXXXXXXXXXXGFASSAHHDDAYEAAKWEKITYLGIATCTVLSI 334
           MA S+ RS     +             GF+SSAHHDDAYEAAKWEKI YLG ATCT+L+I
Sbjct: 1   MAISMMRSALLRNSLRSASKPSAPTRRGFSSSAHHDDAYEAAKWEKIAYLGAATCTILAI 60

Query: 333 YNLSKGHHHSXXXXXXXYLRIRTKEFPWGPDGLFEVKHHSEDHH 202
           YNLSKGH H        YL IR KEFPWGP+GLFEVK   EDHH
Sbjct: 61  YNLSKGHPHYETPPEYPYLHIRNKEFPWGPNGLFEVK---EDHH 101


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