BLASTX nr result
ID: Dioscorea21_contig00000308
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00000308 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro... 118 5e-25 emb|CBI30669.3| unnamed protein product [Vitis vinifera] 118 5e-25 ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro... 118 5e-25 emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera] 118 5e-25 gb|AFK45087.1| unknown [Lotus japonicus] 116 3e-24 >ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] Length = 155 Score = 118 bits (296), Expect = 5e-25 Identities = 59/68 (86%), Positives = 63/68 (92%) Frame = -3 Query: 377 KRRGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQRRRAKGRKVLCTKS 198 K RGL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT GRA+L+RRRAKGRKVLCTKS Sbjct: 88 KGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKS 147 Query: 197 YPNSGKRA 174 P+SGKRA Sbjct: 148 NPSSGKRA 155 >emb|CBI30669.3| unnamed protein product [Vitis vinifera] Length = 113 Score = 118 bits (296), Expect = 5e-25 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%) Frame = -3 Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237 G+DL + V ++R GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT GRA+L+R Sbjct: 33 GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 92 Query: 236 RRAKGRKVLCTKSYPNSGKRA 174 RRAKGRKVLCTKS P+SGKRA Sbjct: 93 RRAKGRKVLCTKSNPSSGKRA 113 >ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis vinifera] Length = 148 Score = 118 bits (296), Expect = 5e-25 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%) Frame = -3 Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237 G+DL + V ++R GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT GRA+L+R Sbjct: 68 GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 127 Query: 236 RRAKGRKVLCTKSYPNSGKRA 174 RRAKGRKVLCTKS P+SGKRA Sbjct: 128 RRAKGRKVLCTKSNPSSGKRA 148 >emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera] Length = 148 Score = 118 bits (296), Expect = 5e-25 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%) Frame = -3 Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237 G+DL + V ++R GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT GRA+L+R Sbjct: 68 GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 127 Query: 236 RRAKGRKVLCTKSYPNSGKRA 174 RRAKGRKVLCTKS P+SGKRA Sbjct: 128 RRAKGRKVLCTKSNPSSGKRA 148 >gb|AFK45087.1| unknown [Lotus japonicus] Length = 146 Score = 116 bits (290), Expect = 3e-24 Identities = 59/67 (88%), Positives = 63/67 (94%), Gaps = 1/67 (1%) Frame = -3 Query: 377 KRRGLQVRAGKA-ALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQRRRAKGRKVLCTK 201 KRRGL VRAGK ALCQTKR+RSRKSLARTHGFRRRMRT GGRAIL+RRRAKGRKVLCTK Sbjct: 80 KRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGRAILRRRRAKGRKVLCTK 139 Query: 200 SYPNSGK 180 ++PNSGK Sbjct: 140 THPNSGK 146