BLASTX nr result

ID: Dioscorea21_contig00000308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000308
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...   118   5e-25
emb|CBI30669.3| unnamed protein product [Vitis vinifera]              118   5e-25
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...   118   5e-25
emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]   118   5e-25
gb|AFK45087.1| unknown [Lotus japonicus]                              116   3e-24

>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score =  118 bits (296), Expect = 5e-25
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -3

Query: 377 KRRGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQRRRAKGRKVLCTKS 198
           K RGL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT  GRA+L+RRRAKGRKVLCTKS
Sbjct: 88  KGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKS 147

Query: 197 YPNSGKRA 174
            P+SGKRA
Sbjct: 148 NPSSGKRA 155


>emb|CBI30669.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score =  118 bits (296), Expect = 5e-25
 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -3

Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237
           G+DL  +  V ++R  GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT  GRA+L+R
Sbjct: 33  GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 92

Query: 236 RRAKGRKVLCTKSYPNSGKRA 174
           RRAKGRKVLCTKS P+SGKRA
Sbjct: 93  RRAKGRKVLCTKSNPSSGKRA 113


>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score =  118 bits (296), Expect = 5e-25
 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -3

Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237
           G+DL  +  V ++R  GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT  GRA+L+R
Sbjct: 68  GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 127

Query: 236 RRAKGRKVLCTKSYPNSGKRA 174
           RRAKGRKVLCTKS P+SGKRA
Sbjct: 128 RRAKGRKVLCTKSNPSSGKRA 148


>emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]
          Length = 148

 Score =  118 bits (296), Expect = 5e-25
 Identities = 62/81 (76%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -3

Query: 413 GIDLGFNKVVIEKR-RGLQVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQR 237
           G+DL  +  V ++R  GL VRAGKAALCQTKR+RSRKSLARTHGFRRRMRT  GRA+L+R
Sbjct: 68  GLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKR 127

Query: 236 RRAKGRKVLCTKSYPNSGKRA 174
           RRAKGRKVLCTKS P+SGKRA
Sbjct: 128 RRAKGRKVLCTKSNPSSGKRA 148


>gb|AFK45087.1| unknown [Lotus japonicus]
          Length = 146

 Score =  116 bits (290), Expect = 3e-24
 Identities = 59/67 (88%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
 Frame = -3

Query: 377 KRRGLQVRAGKA-ALCQTKRSRSRKSLARTHGFRRRMRTPGGRAILQRRRAKGRKVLCTK 201
           KRRGL VRAGK  ALCQTKR+RSRKSLARTHGFRRRMRT GGRAIL+RRRAKGRKVLCTK
Sbjct: 80  KRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGRAILRRRRAKGRKVLCTK 139

Query: 200 SYPNSGK 180
           ++PNSGK
Sbjct: 140 THPNSGK 146


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