BLASTX nr result
ID: Dioscorea21_contig00000083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000083
(2051 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni... 816 0.0
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 816 0.0
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 810 0.0
emb|CBI17177.3| unnamed protein product [Vitis vinifera] 810 0.0
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 807 0.0
>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
[Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
subunit binding-protein alpha subunit, ruba, putative
[Ricinus communis]
Length = 501
Score = 816 bits (2108), Expect = 0.0
Identities = 429/497 (86%), Positives = 468/497 (94%)
Frame = -1
Query: 2006 MATSNAITTASVLSAPRQEGLRRGMAGWLPQRAVAGKSHRRFSVRATAKEIAFDQSSRSA 1827
MATSNAI+TAS+L +P+Q LRR QR G+S RRF+VRA AK+IAFDQ+SR+A
Sbjct: 1 MATSNAISTASILCSPKQGNLRRRTNQQQNQRLNYGQSSRRFTVRANAKDIAFDQNSRTA 60
Query: 1826 LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIRE 1647
LQ+G++KLADAVG+TLGPRGRNVVLDEFG+P+VVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 1646 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKAR 1467
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIK+GIDKTVQGL+EELEKKAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKAR 180
Query: 1466 PVEGRGDIKAVASISAGNDEFIGEMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 1287
PV+GR DIKAVASISAGNDE IG MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEID
Sbjct: 181 PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240
Query: 1286 RGYISPQFVNNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTG 1107
RGYISPQFV NPEKL+ EFENARVLVTDQKI+ IK+IIPLLEKTTQLRAPLLIIAEDVTG
Sbjct: 241 RGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300
Query: 1106 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEE 927
EALATLVVNK+RGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA DLGLL+ENT+VE+
Sbjct: 301 EALATLVVNKMRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQ 360
Query: 926 LGTARKITISQSSTTMIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGV 747
LG ARK+TI++ STT+IADAA+KDE+QARIAQ+K+ELAETDS+YDSEKLAERIAKLSGGV
Sbjct: 361 LGIARKVTITKDSTTLIADAASKDELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGV 420
Query: 746 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSACVPAIKDKIEDN 567
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS VPAIK+KI+D
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAIKEKIKDA 480
Query: 566 DEKLGADIVQKALVAPA 516
DE+LGADIVQKALVAPA
Sbjct: 481 DERLGADIVQKALVAPA 497
>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
predicted protein [Populus trichocarpa]
Length = 587
Score = 816 bits (2108), Expect = 0.0
Identities = 429/497 (86%), Positives = 465/497 (93%)
Frame = -1
Query: 2006 MATSNAITTASVLSAPRQEGLRRGMAGWLPQRAVAGKSHRRFSVRATAKEIAFDQSSRSA 1827
MATSNA++TAS+L +P+Q GLRR R G S RRFSVRA AK+IAFDQ SR+A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60
Query: 1826 LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIRE 1647
LQ+G++KLADAVG+TLGPRGRNVVLDEFG+P+VVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 1646 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKAR 1467
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIK+GIDKTVQGLVEELEKKAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180
Query: 1466 PVEGRGDIKAVASISAGNDEFIGEMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 1287
PV+GR DIKAVASISAGNDE IG MIADAIDKVGPDGVLSIESSSSFET V+VEEGMEID
Sbjct: 181 PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240
Query: 1286 RGYISPQFVNNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTG 1107
RGYISPQFV NPEKL+ EFENARVL+TDQKI+ IK+IIPLLEKTTQLRAPLLIIAEDVTG
Sbjct: 241 RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300
Query: 1106 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEE 927
EALATLVVNKLRG+LNVAAIKAPGFGERRKA+LQDIAI+TGAEFQA DLGL IENT++E+
Sbjct: 301 EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 926 LGTARKITISQSSTTMIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGV 747
LG ARK+TIS+ STT+IADAA+KDE+QARIAQ+KKEL+ETDS+YDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 746 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSACVPAIKDKIEDN 567
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS CVPAIKDKIED
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480
Query: 566 DEKLGADIVQKALVAPA 516
DE+LGADIVQKALV+PA
Sbjct: 481 DERLGADIVQKALVSPA 497
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 810 bits (2092), Expect = 0.0
Identities = 429/497 (86%), Positives = 466/497 (93%)
Frame = -1
Query: 2006 MATSNAITTASVLSAPRQEGLRRGMAGWLPQRAVAGKSHRRFSVRATAKEIAFDQSSRSA 1827
MA++NAI+TAS++ +P+QE RR + + S+ RF VRA+AKEIAFDQSSR+A
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60
Query: 1826 LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIRE 1647
LQAG++KLADAVG+TLGPRGRNVVLDEFG+P+VVNDGVTIARAIELAD MENAGAALIRE
Sbjct: 61 LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120
Query: 1646 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKAR 1467
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTV LV+ELEKKAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180
Query: 1466 PVEGRGDIKAVASISAGNDEFIGEMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 1287
PVEG DIKAVASISAGNDEFIG MIADAI+KVGPDGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181 PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240
Query: 1286 RGYISPQFVNNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTG 1107
RGYISPQFV NPEKL+ EFENARVLVTDQKI+TIK+IIPLLEKTTQLR+PLLI+AEDVTG
Sbjct: 241 RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300
Query: 1106 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEE 927
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA DLGLLIENT+VE+
Sbjct: 301 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360
Query: 926 LGTARKITISQSSTTMIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGV 747
LG ARK+TI++ STT+IADAA+KDEIQARIAQIKKELAETDS+YD+EKLAERIAKLSGGV
Sbjct: 361 LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420
Query: 746 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSACVPAIKDKIEDN 567
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA+VHLS VPAIKDK+ED
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480
Query: 566 DEKLGADIVQKALVAPA 516
DE+LGADIVQKALVAPA
Sbjct: 481 DERLGADIVQKALVAPA 497
>emb|CBI17177.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 810 bits (2092), Expect = 0.0
Identities = 429/497 (86%), Positives = 466/497 (93%)
Frame = -1
Query: 2006 MATSNAITTASVLSAPRQEGLRRGMAGWLPQRAVAGKSHRRFSVRATAKEIAFDQSSRSA 1827
MA++NAI+TAS++ +P+QE RR + + S+ RF VRA+AKEIAFDQSSR+A
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60
Query: 1826 LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIRE 1647
LQAG++KLADAVG+TLGPRGRNVVLDEFG+P+VVNDGVTIARAIELAD MENAGAALIRE
Sbjct: 61 LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120
Query: 1646 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKAR 1467
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTV LV+ELEKKAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180
Query: 1466 PVEGRGDIKAVASISAGNDEFIGEMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 1287
PVEG DIKAVASISAGNDEFIG MIADAI+KVGPDGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181 PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240
Query: 1286 RGYISPQFVNNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTG 1107
RGYISPQFV NPEKL+ EFENARVLVTDQKI+TIK+IIPLLEKTTQLR+PLLI+AEDVTG
Sbjct: 241 RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300
Query: 1106 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEE 927
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAI+TGAEFQA DLGLLIENT+VE+
Sbjct: 301 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360
Query: 926 LGTARKITISQSSTTMIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGV 747
LG ARK+TI++ STT+IADAA+KDEIQARIAQIKKELAETDS+YD+EKLAERIAKLSGGV
Sbjct: 361 LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420
Query: 746 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSACVPAIKDKIEDN 567
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA+VHLS VPAIKDK+ED
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480
Query: 566 DEKLGADIVQKALVAPA 516
DE+LGADIVQKALVAPA
Sbjct: 481 DERLGADIVQKALVAPA 497
>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 807 bits (2084), Expect = 0.0
Identities = 426/497 (85%), Positives = 465/497 (93%)
Frame = -1
Query: 2006 MATSNAITTASVLSAPRQEGLRRGMAGWLPQRAVAGKSHRRFSVRATAKEIAFDQSSRSA 1827
MATSNA++TAS+L +P+Q GLRR R G+S RRF+VRA AK+IAFDQ SR+A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60
Query: 1826 LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIRE 1647
LQ+G++KLADAVG+TLGPRGRNVVLDEFG+P+VVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 1646 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKKAR 1467
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEK+AR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180
Query: 1466 PVEGRGDIKAVASISAGNDEFIGEMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 1287
PV+GR DIKAVA+ISAGNDE IG MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEID
Sbjct: 181 PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240
Query: 1286 RGYISPQFVNNPEKLLVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTG 1107
RGYISPQFV NPEKL+ FENARVLVTDQKIS IK+IIPLLEKTTQLR+PLLIIAEDVTG
Sbjct: 241 RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300
Query: 1106 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLIENTTVEE 927
EALATLVVNKLRGILNV+AIKAPGFGERRKA+LQDIAI+TGAEFQA DLGL IENT++E+
Sbjct: 301 EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 926 LGTARKITISQSSTTMIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGV 747
LG ARK+TIS+ STT+IADAA+KDE+QARIAQ+KKEL+ETDS+YDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 746 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSACVPAIKDKIEDN 567
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS VPAIK+KI+D
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480
Query: 566 DEKLGADIVQKALVAPA 516
DE+LGADIVQKALVAPA
Sbjct: 481 DERLGADIVQKALVAPA 497