BLASTX nr result
ID: Dioscorea21_contig00000013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000013
(1556 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK24405.1| unknown [Picea sitchensis] 417 0.0
ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3... 417 0.0
ref|NP_001043673.1| Os01g0639100 [Oryza sativa Japonica Group] g... 415 0.0
ref|NP_001050506.1| Os03g0566800 [Oryza sativa Japonica Group] g... 415 0.0
ref|XP_001780266.1| predicted protein [Physcomitrella patens sub... 410 0.0
>gb|ABK24405.1| unknown [Picea sitchensis]
Length = 408
Score = 417 bits (1071), Expect(2) = 0.0
Identities = 206/228 (90%), Positives = 224/228 (98%)
Frame = -1
Query: 1382 DENLVFDTTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAILPIVSGRDVIAQA 1203
DENL+F+T+PGVE I+SFDQMGIRDDLLRGIY YGFEKPSAIQQRA++PI++GRDVIAQA
Sbjct: 20 DENLIFETSPGVEVISSFDQMGIRDDLLRGIYQYGFEKPSAIQQRAVMPIINGRDVIAQA 79
Query: 1202 QSGTGKTSMIALSVCQMVDTASREVQALILSPTRELAQQTEKVILAIGDYINVQAHACIG 1023
QSGTGKTSMIAL+VCQ++DT+ REVQALI+SPTRELA QTEKVILAIGD+INVQAHACIG
Sbjct: 80 QSGTGKTSMIALAVCQIIDTSIREVQALIVSPTRELAAQTEKVILAIGDFINVQAHACIG 139
Query: 1022 GKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 843
GKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRA+KLL+LDESDEMLSRGFKDQIY
Sbjct: 140 GKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAVKLLVLDESDEMLSRGFKDQIY 199
Query: 842 DVYRYLPPELQVVLISATLPHEILEITSKFMTEPVRILVKRDELTLEG 699
DVYRYLPPELQVVLISATLPHEILEIT+KFMT+PVRILVKRDELTLEG
Sbjct: 200 DVYRYLPPELQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLEG 247
Score = 281 bits (719), Expect(2) = 0.0
Identities = 137/142 (96%), Positives = 141/142 (99%)
Frame = -3
Query: 618 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMSEFRSGVTR 439
DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVS+MHGDMPQKERDAIM+EFR+G TR
Sbjct: 267 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMAEFRAGTTR 326
Query: 438 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 259
VLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL
Sbjct: 327 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 386
Query: 258 RDIEQYYSTQIDEMPMNVADLI 193
RDIEQYYSTQIDEMPMNVADLI
Sbjct: 387 RDIEQYYSTQIDEMPMNVADLI 408
>ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Vitis vinifera]
Length = 412
Score = 417 bits (1072), Expect(2) = 0.0
Identities = 208/230 (90%), Positives = 224/230 (97%)
Frame = -1
Query: 1388 LDDENLVFDTTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAILPIVSGRDVIA 1209
+DDE LVF+TT GVE I SFDQMGI+DDLLRGIYAYGFEKPSAIQQRA+LPI+ GRDVIA
Sbjct: 22 VDDEKLVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIA 81
Query: 1208 QAQSGTGKTSMIALSVCQMVDTASREVQALILSPTRELAQQTEKVILAIGDYINVQAHAC 1029
QAQSGTGKTSMIAL+VCQMVDT++REVQALILSPTRELA QTEKVILAIGD+IN+QAHAC
Sbjct: 82 QAQSGTGKTSMIALTVCQMVDTSNREVQALILSPTRELASQTEKVILAIGDFINIQAHAC 141
Query: 1028 IGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQ 849
IGGKS+GEDIRKLEYGVH+VSGTPGRVCDMIKRRTLRTRAIKLL+LDESDEMLSRGFKDQ
Sbjct: 142 IGGKSVGEDIRKLEYGVHIVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQ 201
Query: 848 IYDVYRYLPPELQVVLISATLPHEILEITSKFMTEPVRILVKRDELTLEG 699
IYDVYRYLPPELQVVLISATLP+EILEIT+KFMT+PVRILVKRDELTLEG
Sbjct: 202 IYDVYRYLPPELQVVLISATLPNEILEITNKFMTDPVRILVKRDELTLEG 251
Score = 278 bits (710), Expect(2) = 0.0
Identities = 135/142 (95%), Positives = 140/142 (98%)
Frame = -3
Query: 618 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMSEFRSGVTR 439
DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVS+MHGDMPQKERDAIM+EFRSG TR
Sbjct: 271 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMAEFRSGTTR 330
Query: 438 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 259
VLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV+ DDI+IL
Sbjct: 331 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKTDDIKIL 390
Query: 258 RDIEQYYSTQIDEMPMNVADLI 193
RDIEQYYSTQIDEMPMNVADLI
Sbjct: 391 RDIEQYYSTQIDEMPMNVADLI 412
>ref|NP_001043673.1| Os01g0639100 [Oryza sativa Japonica Group]
gi|75321708|sp|Q5VNM3.1|RH2_ORYSJ RecName: Full=DEAD-box
ATP-dependent RNA helicase 2 gi|55297015|dbj|BAD68586.1|
putative nicotiana eukaryotic translation initiation
factor 4A [Oryza sativa Japonica Group]
gi|55297606|dbj|BAD68952.1| putative nicotiana eukaryotic
translation initiation factor 4A [Oryza sativa Japonica
Group] gi|113533204|dbj|BAF05587.1| Os01g0639100 [Oryza
sativa Japonica Group] gi|215707106|dbj|BAG93566.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222618929|gb|EEE55061.1| hypothetical protein
OsJ_02769 [Oryza sativa Japonica Group]
Length = 404
Score = 415 bits (1067), Expect(2) = 0.0
Identities = 207/230 (90%), Positives = 223/230 (96%)
Frame = -1
Query: 1388 LDDENLVFDTTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAILPIVSGRDVIA 1209
+DDENL F+T+PGVE I+SFDQMGIRDDLLRGIYAYGFEKPSAIQQRA+LPI+SGRDVIA
Sbjct: 14 MDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIA 73
Query: 1208 QAQSGTGKTSMIALSVCQMVDTASREVQALILSPTRELAQQTEKVILAIGDYINVQAHAC 1029
QAQSGTGKTSMI+LSVCQ+VDTA REVQALILSPTRELA QTE+V+LAIGD+IN+Q HAC
Sbjct: 74 QAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHAC 133
Query: 1028 IGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQ 849
IGGKSIGEDIRKLE+GVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDE+DEML RGFKDQ
Sbjct: 134 IGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQ 193
Query: 848 IYDVYRYLPPELQVVLISATLPHEILEITSKFMTEPVRILVKRDELTLEG 699
IYDVYRYLPPELQV LISATLPHEILE+TSKFMT+PVRILVKRDELTLEG
Sbjct: 194 IYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEG 243
Score = 277 bits (708), Expect(2) = 0.0
Identities = 135/142 (95%), Positives = 139/142 (97%)
Frame = -3
Query: 618 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMSEFRSGVTR 439
DLYDTLTITQAVIFCNTKRKVDWLTE+MRSNNFTVSAMHGDMPQKERDAIM EFRSG TR
Sbjct: 263 DLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATR 322
Query: 438 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 259
VLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV+ +DIRIL
Sbjct: 323 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRIL 382
Query: 258 RDIEQYYSTQIDEMPMNVADLI 193
RDIEQYYSTQIDEMPMNVADLI
Sbjct: 383 RDIEQYYSTQIDEMPMNVADLI 404
>ref|NP_001050506.1| Os03g0566800 [Oryza sativa Japonica Group]
gi|122246919|sp|Q10I26.1|RH34_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 34
gi|13957631|gb|AAK50586.1|AC084404_11 putative
translation initiation factor [Oryza sativa Japonica
Group] gi|108709369|gb|ABF97164.1| Eukaryotic initiation
factor 4A-3, putative, expressed [Oryza sativa Japonica
Group] gi|113548977|dbj|BAF12420.1| Os03g0566800 [Oryza
sativa Japonica Group]
Length = 404
Score = 415 bits (1067), Expect(2) = 0.0
Identities = 207/230 (90%), Positives = 223/230 (96%)
Frame = -1
Query: 1388 LDDENLVFDTTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAILPIVSGRDVIA 1209
+DDENL F+T+PGVE I+SFDQMGIR+DLLRGIYAYGFEKPSAIQQRA+LPI+SGRDVIA
Sbjct: 14 MDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIA 73
Query: 1208 QAQSGTGKTSMIALSVCQMVDTASREVQALILSPTRELAQQTEKVILAIGDYINVQAHAC 1029
QAQSGTGKTSMI+LSVCQ+VDTA REVQALILSPTRELA QTE+V+LAIGDYIN+Q HAC
Sbjct: 74 QAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHAC 133
Query: 1028 IGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQ 849
IGGKSIGEDIRKLE+GVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDE+DEML RGFKDQ
Sbjct: 134 IGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQ 193
Query: 848 IYDVYRYLPPELQVVLISATLPHEILEITSKFMTEPVRILVKRDELTLEG 699
IYDVYRYLPPELQV LISATLPHEILE+TSKFMT+PVRILVKRDELTLEG
Sbjct: 194 IYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEG 243
Score = 277 bits (708), Expect(2) = 0.0
Identities = 135/142 (95%), Positives = 139/142 (97%)
Frame = -3
Query: 618 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMSEFRSGVTR 439
DLYDTLTITQAVIFCNTKRKVDWLTE+MRSNNFTVSAMHGDMPQKERDAIM EFRSG TR
Sbjct: 263 DLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATR 322
Query: 438 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 259
VLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV+ +DIRIL
Sbjct: 323 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRIL 382
Query: 258 RDIEQYYSTQIDEMPMNVADLI 193
RDIEQYYSTQIDEMPMNVADLI
Sbjct: 383 RDIEQYYSTQIDEMPMNVADLI 404
>ref|XP_001780266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668320|gb|EDQ54930.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 397
Score = 410 bits (1053), Expect(2) = 0.0
Identities = 205/229 (89%), Positives = 223/229 (97%)
Frame = -1
Query: 1385 DDENLVFDTTPGVEAITSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAILPIVSGRDVIAQ 1206
+ ENLVF+T+ GVE I+SFDQMGIR+DLLRGIYAYGFEKPSAIQQRA++PI+SGRD IAQ
Sbjct: 8 EGENLVFETSAGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQ 67
Query: 1205 AQSGTGKTSMIALSVCQMVDTASREVQALILSPTRELAQQTEKVILAIGDYINVQAHACI 1026
AQSGTGKTSMIAL+VCQM+DTA+REVQALILSPTRELA QTEKVILAIGD++NVQAHACI
Sbjct: 68 AQSGTGKTSMIALAVCQMIDTATREVQALILSPTRELAAQTEKVILAIGDFMNVQAHACI 127
Query: 1025 GGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQI 846
GGKSIGEDIRKLEYGVHVVSGTPGRV DMIKRRTLRTR+IKLLILDESDEMLSRGFKDQI
Sbjct: 128 GGKSIGEDIRKLEYGVHVVSGTPGRVYDMIKRRTLRTRSIKLLILDESDEMLSRGFKDQI 187
Query: 845 YDVYRYLPPELQVVLISATLPHEILEITSKFMTEPVRILVKRDELTLEG 699
YDVYRYLPPELQVVL+SATLPHEILE+T+KFMT+PVRILVKRDELTLEG
Sbjct: 188 YDVYRYLPPELQVVLVSATLPHEILEMTNKFMTDPVRILVKRDELTLEG 236
Score = 281 bits (720), Expect(2) = 0.0
Identities = 138/142 (97%), Positives = 141/142 (99%)
Frame = -3
Query: 618 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMSEFRSGVTR 439
DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIM+EFRSG TR
Sbjct: 256 DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMAEFRSGTTR 315
Query: 438 VLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRIL 259
VLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVR+DDIRIL
Sbjct: 316 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRSDDIRIL 375
Query: 258 RDIEQYYSTQIDEMPMNVADLI 193
RDIEQYYSTQIDEMPMNVADLI
Sbjct: 376 RDIEQYYSTQIDEMPMNVADLI 397