BLASTX nr result
ID: Cornus23_contig00027274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00027274
(607 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009768956.1| PREDICTED: glycine-rich RNA-binding protein ... 158 2e-36
ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein ... 156 7e-36
ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein ... 155 2e-35
ref|XP_009600551.1| PREDICTED: glycine-rich RNA-binding protein ... 155 2e-35
ref|XP_009626494.1| PREDICTED: glycine-rich RNA-binding protein ... 154 5e-35
ref|XP_010650691.1| PREDICTED: glycine-rich RNA-binding protein ... 150 5e-34
ref|XP_010650690.1| PREDICTED: glycine-rich RNA-binding protein ... 147 4e-33
ref|XP_012064991.1| PREDICTED: glycine-rich RNA-binding protein ... 147 4e-33
ref|XP_011000293.1| PREDICTED: glycine-rich RNA-binding protein ... 146 1e-32
ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Popu... 145 1e-32
ref|XP_010650689.1| PREDICTED: glycine-rich RNA-binding protein ... 145 2e-32
ref|XP_004295934.2| PREDICTED: glycine-rich RNA-binding protein ... 143 6e-32
ref|XP_011461257.1| PREDICTED: glycine-rich RNA-binding protein ... 143 6e-32
ref|XP_011000291.1| PREDICTED: glycine-rich RNA-binding protein ... 143 8e-32
ref|XP_010650688.1| PREDICTED: glycine-rich RNA-binding protein ... 142 1e-31
gb|EYU18947.1| hypothetical protein MIMGU_mgv1a025289mg [Erythra... 142 1e-31
ref|XP_012827910.1| PREDICTED: glycine-rich RNA-binding protein ... 142 2e-31
ref|XP_008385151.1| PREDICTED: glycine-rich RNA-binding protein ... 142 2e-31
ref|XP_008357612.1| PREDICTED: glycine-rich RNA-binding protein ... 141 3e-31
ref|XP_007016499.1| Glycine-rich RNA-binding protein 2 [Theobrom... 141 3e-31
>ref|XP_009768956.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Nicotiana sylvestris]
Length = 105
Score = 158 bits (399), Expect = 2e-36
Identities = 74/92 (80%), Positives = 84/92 (91%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
+L +R +ISRHSC+KLF+GGLCYDTNE VLK AF +HGEIIE +VIC+H SGKSKGYGFV
Sbjct: 13 TLLSRMIISRHSCSKLFIGGLCYDTNEPVLKQAFEQHGEIIEVKVICDHKSGKSKGYGFV 72
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
+FTSETAASKALKEMDGQLLDGRNIR+ YAHK
Sbjct: 73 KFTSETAASKALKEMDGQLLDGRNIRISYAHK 104
>ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum]
gi|565367009|ref|XP_006350172.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like isoform X2
[Solanum tuberosum] gi|565367011|ref|XP_006350173.1|
PREDICTED: glycine-rich RNA-binding protein 4,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 105
Score = 156 bits (395), Expect = 7e-36
Identities = 72/90 (80%), Positives = 82/90 (91%)
Frame = -3
Query: 416 ARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFT 237
AR++ SRHSC+KLF+GGLCYDTNE +LK AF +HGE IE +VIC+H SGKSKGYGFV+FT
Sbjct: 16 ARFVTSRHSCSKLFIGGLCYDTNEPILKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFT 75
Query: 236 SETAASKALKEMDGQLLDGRNIRVHYAHKG 147
SETAASKALKEMDGQLLDGRNIR+ YAHKG
Sbjct: 76 SETAASKALKEMDGQLLDGRNIRISYAHKG 105
>ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum lycopersicum] gi|723688802|ref|XP_010319173.1|
PREDICTED: glycine-rich RNA-binding protein 4,
mitochondrial-like [Solanum lycopersicum]
gi|723688805|ref|XP_010319174.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Solanum
lycopersicum] gi|723688810|ref|XP_010319175.1|
PREDICTED: glycine-rich RNA-binding protein 4,
mitochondrial-like [Solanum lycopersicum]
Length = 105
Score = 155 bits (392), Expect = 2e-35
Identities = 72/90 (80%), Positives = 82/90 (91%)
Frame = -3
Query: 416 ARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFT 237
AR++ SRHSC+KLF+GGLCYDTNE VLK AF +HGE IE +VIC+H SGKSKGYGFV+FT
Sbjct: 16 ARFVTSRHSCSKLFIGGLCYDTNEPVLKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFT 75
Query: 236 SETAASKALKEMDGQLLDGRNIRVHYAHKG 147
SETAASKALKEMDGQLLDGRNIR+ +AHKG
Sbjct: 76 SETAASKALKEMDGQLLDGRNIRISFAHKG 105
>ref|XP_009600551.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tomentosiformis]
Length = 105
Score = 155 bits (391), Expect = 2e-35
Identities = 73/92 (79%), Positives = 83/92 (90%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
+L +R + SRHSC+KLF+GGLCYDTNE VLK AF +HGEIIE +VIC+H SGKSKGYGFV
Sbjct: 13 TLLSRMIPSRHSCSKLFIGGLCYDTNEPVLKHAFEQHGEIIEVKVICDHKSGKSKGYGFV 72
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
+FTSETAASKALKEMDGQLLDGRNIR+ YAHK
Sbjct: 73 KFTSETAASKALKEMDGQLLDGRNIRISYAHK 104
>ref|XP_009626494.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tomentosiformis]
Length = 108
Score = 154 bits (388), Expect = 5e-35
Identities = 72/89 (80%), Positives = 80/89 (89%)
Frame = -3
Query: 416 ARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFT 237
AR + SRHSC+KLF+GGLCYDTNE VLK AF +HGEI E +VIC+H SGKSKGYGFV+FT
Sbjct: 19 ARMVTSRHSCSKLFIGGLCYDTNEPVLKQAFEQHGEITEVKVICDHKSGKSKGYGFVKFT 78
Query: 236 SETAASKALKEMDGQLLDGRNIRVHYAHK 150
SETAASKALKEMDGQLLDGRNIR+ YAHK
Sbjct: 79 SETAASKALKEMDGQLLDGRNIRISYAHK 107
>ref|XP_010650691.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X4 [Vitis vinifera]
Length = 106
Score = 150 bits (379), Expect = 5e-34
Identities = 73/97 (75%), Positives = 81/97 (83%)
Frame = -3
Query: 437 LFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKG 258
L AS RWL+SR SC KLF+GGL YDTNE +LKDAFG++GEIIE +VIC+HVSGKSKG
Sbjct: 10 LSPASPCFRWLVSRGSCRKLFIGGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKG 69
Query: 257 YGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
YGFVQFTS+ A ALKEMDGQ LDGRNIRV YAHKG
Sbjct: 70 YGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 106
>ref|XP_010650690.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X3 [Vitis vinifera]
Length = 107
Score = 147 bits (371), Expect = 4e-33
Identities = 74/98 (75%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Frame = -3
Query: 437 LFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEA-RVICNHVSGKSK 261
L AS RWL+SR SC KLF+GGL YDTNE +LKDAFG++GEIIEA +VIC+HVSGKSK
Sbjct: 10 LSPASPCFRWLVSRGSCRKLFIGGLSYDTNETILKDAFGQYGEIIEAVKVICDHVSGKSK 69
Query: 260 GYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
GYGFVQFTS+ A ALKEMDGQ LDGRNIRV YAHKG
Sbjct: 70 GYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 107
>ref|XP_012064991.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Jatropha curcas] gi|643738214|gb|KDP44202.1|
hypothetical protein JCGZ_05669 [Jatropha curcas]
Length = 107
Score = 147 bits (371), Expect = 4e-33
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = -3
Query: 416 ARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFT 237
ARWL RHSC KLFVGGL YDTNE VLK+AF +HGEIIE ++IC+HVSGKSKGYGFVQF+
Sbjct: 18 ARWLWVRHSCNKLFVGGLSYDTNETVLKNAFEKHGEIIEVKIICDHVSGKSKGYGFVQFS 77
Query: 236 SETAASKALKEMDGQLLDGRNIRVHYAHK 150
E+AAS ALKEM+GQLLD RNIRV+YAHK
Sbjct: 78 CESAASIALKEMNGQLLDDRNIRVYYAHK 106
>ref|XP_011000293.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Populus euphratica]
Length = 103
Score = 146 bits (368), Expect = 1e-32
Identities = 74/102 (72%), Positives = 83/102 (81%)
Frame = -3
Query: 455 LYCSNRLFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHV 276
+ C NR L AR L++RH TKLFVGGL YDTNE VLKDAFG++GEIIE +VIC+ V
Sbjct: 1 MQCLNRSVSLPL-ARQLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEVKVICHRV 59
Query: 275 SGKSKGYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
G+SKGYGFVQF+SE AAS ALKEMDGQLLD RNIRVHYAHK
Sbjct: 60 YGESKGYGFVQFSSEAAASTALKEMDGQLLDDRNIRVHYAHK 101
>ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Populus trichocarpa]
gi|550348075|gb|ERP66081.1| hypothetical protein
POPTR_0001s24310g [Populus trichocarpa]
Length = 103
Score = 145 bits (367), Expect = 1e-32
Identities = 74/102 (72%), Positives = 83/102 (81%)
Frame = -3
Query: 455 LYCSNRLFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHV 276
+ C NR L AR L++RH TKLFVGGL YDTNE VLKDAFG++GEIIE +VIC+ V
Sbjct: 1 MQCLNRSVSLPL-ARRLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEVKVICHRV 59
Query: 275 SGKSKGYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
G+SKGYGFVQF+SE AAS ALKEMDGQLLD RNIRVHYAHK
Sbjct: 60 YGESKGYGFVQFSSEAAASTALKEMDGQLLDDRNIRVHYAHK 101
>ref|XP_010650689.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X2 [Vitis vinifera] gi|296084274|emb|CBI24662.3|
unnamed protein product [Vitis vinifera]
Length = 108
Score = 145 bits (366), Expect = 2e-32
Identities = 73/99 (73%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
Frame = -3
Query: 437 LFDASLSARWLISRHSCTKLFVG--GLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKS 264
L AS RWL+SR SC KLF+G GL YDTNE +LKDAFG++GEIIE +VIC+HVSGKS
Sbjct: 10 LSPASPCFRWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKS 69
Query: 263 KGYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
KGYGFVQFTS+ A ALKEMDGQ LDGRNIRV YAHKG
Sbjct: 70 KGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108
>ref|XP_004295934.2| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X3 [Fragaria vesca subsp. vesca]
Length = 130
Score = 143 bits (361), Expect = 6e-32
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
S+ AR +R S TKLFVGGL YDTNE VLKDAFG+HGEIIE +VIC+HVSGKSKGYGFV
Sbjct: 16 SILARKSWARLSSTKLFVGGLSYDTNEPVLKDAFGKHGEIIEVKVICDHVSGKSKGYGFV 75
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
+FTSET AS ALKEMDGQ+LDGR IR+ +AHKG
Sbjct: 76 KFTSETEASTALKEMDGQVLDGRQIRLEFAHKG 108
>ref|XP_011461257.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X4 [Fragaria vesca subsp. vesca]
Length = 108
Score = 143 bits (361), Expect = 6e-32
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
S+ AR +R S TKLFVGGL YDTNE VLKDAFG+HGEIIE +VIC+HVSGKSKGYGFV
Sbjct: 16 SILARKSWARLSSTKLFVGGLSYDTNEPVLKDAFGKHGEIIEVKVICDHVSGKSKGYGFV 75
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
+FTSET AS ALKEMDGQ+LDGR IR+ +AHKG
Sbjct: 76 KFTSETEASTALKEMDGQVLDGRQIRLEFAHKG 108
>ref|XP_011000291.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Populus euphratica]
gi|743912795|ref|XP_011000292.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like isoform X1
[Populus euphratica]
Length = 104
Score = 143 bits (360), Expect = 8e-32
Identities = 75/103 (72%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Frame = -3
Query: 455 LYCSNRLFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEA-RVICNH 279
+ C NR L AR L++RH TKLFVGGL YDTNE VLKDAFG++GEIIEA +VIC+
Sbjct: 1 MQCLNRSVSLPL-ARQLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEAVKVICHR 59
Query: 278 VSGKSKGYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
V G+SKGYGFVQF+SE AAS ALKEMDGQLLD RNIRVHYAHK
Sbjct: 60 VYGESKGYGFVQFSSEAAASTALKEMDGQLLDDRNIRVHYAHK 102
>ref|XP_010650688.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X1 [Vitis vinifera]
Length = 109
Score = 142 bits (358), Expect = 1e-31
Identities = 74/100 (74%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Frame = -3
Query: 437 LFDASLSARWLISRHSCTKLFVG--GLCYDTNEAVLKDAFGEHGEIIEA-RVICNHVSGK 267
L AS RWL+SR SC KLF+G GL YDTNE +LKDAFG++GEIIEA +VIC+HVSGK
Sbjct: 10 LSPASPCFRWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEAVKVICDHVSGK 69
Query: 266 SKGYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
SKGYGFVQFTS+ A ALKEMDGQ LDGRNIRV YAHKG
Sbjct: 70 SKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 109
>gb|EYU18947.1| hypothetical protein MIMGU_mgv1a025289mg [Erythranthe guttata]
Length = 112
Score = 142 bits (358), Expect = 1e-31
Identities = 69/96 (71%), Positives = 77/96 (80%)
Frame = -3
Query: 413 RWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFTS 234
RWL R SCT LFVGGL YDTNE LKDAF E+GEIIE +VIC+ VSGKS+GYGFV ++S
Sbjct: 17 RWLTWRRSCTHLFVGGLSYDTNETALKDAFDEYGEIIEVKVICDRVSGKSRGYGFVHYSS 76
Query: 233 ETAASKALKEMDGQLLDGRNIRVHYAHKG*P*STSV 126
E AA+KALKEMDGQLLDGRNIR+HY H ST V
Sbjct: 77 ELAANKALKEMDGQLLDGRNIRIHYGHVDGKQSTQV 112
>ref|XP_012827910.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Erythranthe guttatus]
Length = 125
Score = 142 bits (357), Expect = 2e-31
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = -3
Query: 413 RWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFVQFTS 234
RWL R SCT LFVGGL YDTNE LKDAF E+GEIIE +VIC+ VSGKS+GYGFV ++S
Sbjct: 17 RWLTWRRSCTHLFVGGLSYDTNETALKDAFDEYGEIIEVKVICDRVSGKSRGYGFVHYSS 76
Query: 233 ETAASKALKEMDGQLLDGRNIRVHYAH 153
E AA+KALKEMDGQLLDGRNIR+HY H
Sbjct: 77 ELAANKALKEMDGQLLDGRNIRIHYGH 103
>ref|XP_008385151.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Malus domestica]
Length = 106
Score = 142 bits (357), Expect = 2e-31
Identities = 66/92 (71%), Positives = 82/92 (89%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
S+ AR L++RHSC+KLFV GL +DTNE VLK+AFG+HGEIIE +VIC+HVSGKS+GYGFV
Sbjct: 14 SVLARILLTRHSCSKLFVSGLSWDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSRGYGFV 73
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
+FTSE+ A+ ALKEMDGQ+LDGR IR+ +AHK
Sbjct: 74 KFTSESEATTALKEMDGQVLDGRQIRLQFAHK 105
>ref|XP_008357612.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Malus domestica]
Length = 106
Score = 141 bits (355), Expect = 3e-31
Identities = 66/92 (71%), Positives = 82/92 (89%)
Frame = -3
Query: 425 SLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSKGYGFV 246
S+ AR L++RHSC+KLFV GL +DTNE VLK+AFG+HGEIIE +VIC+HVSGKS+GYGFV
Sbjct: 14 SVLARILLTRHSCSKLFVAGLSWDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSRGYGFV 73
Query: 245 QFTSETAASKALKEMDGQLLDGRNIRVHYAHK 150
+FTSE+ A+ ALKEMDGQ+LDGR IR+ +AHK
Sbjct: 74 KFTSESEATIALKEMDGQVLDGRQIRLQFAHK 105
>ref|XP_007016499.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao]
gi|508786862|gb|EOY34118.1| Glycine-rich RNA-binding
protein 2 [Theobroma cacao]
Length = 106
Score = 141 bits (355), Expect = 3e-31
Identities = 71/98 (72%), Positives = 79/98 (80%)
Frame = -3
Query: 440 RLFDASLSARWLISRHSCTKLFVGGLCYDTNEAVLKDAFGEHGEIIEARVICNHVSGKSK 261
RLF A L R+SC+KLFVGGL YDTNE VLKDAF +HGEIIE RVIC+HVSGKS+
Sbjct: 9 RLFRTIPLAGSLSVRNSCSKLFVGGLSYDTNETVLKDAFEKHGEIIEVRVICHHVSGKSR 68
Query: 260 GYGFVQFTSETAASKALKEMDGQLLDGRNIRVHYAHKG 147
GYGFV+F SE AA+ ALKEM Q+LDGRNIRV YAHKG
Sbjct: 69 GYGFVRFASEAAANAALKEMHSQVLDGRNIRVEYAHKG 106