BLASTX nr result
ID: Cornus23_contig00023862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00023862
(410 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301073.2| seryl-tRNA synthetase family protein [Populu... 114 4e-23
gb|ABK95128.1| unknown [Populus trichocarpa] 112 8e-23
ref|XP_011016816.1| PREDICTED: serine--tRNA ligase, mitochondria... 112 1e-22
ref|XP_007018713.1| Seryl-tRNA synthetase isoform 3 [Theobroma c... 105 2e-20
ref|XP_007018712.1| Seryl-tRNA synthetase isoform 2 [Theobroma c... 105 2e-20
ref|XP_007018711.1| Seryl-tRNA synthetase isoform 1 [Theobroma c... 105 2e-20
ref|XP_010278856.1| PREDICTED: serine--tRNA ligase, mitochondria... 100 5e-19
gb|KHG00495.1| Serine--tRNA ligase [Gossypium arboreum] 97 5e-18
ref|XP_012445645.1| PREDICTED: serine--tRNA ligase, mitochondria... 96 8e-18
gb|KJB58987.1| hypothetical protein B456_009G234100 [Gossypium r... 96 8e-18
ref|XP_010098632.1| Serine--tRNA ligase [Morus notabilis] gi|587... 92 1e-16
ref|XP_002269287.2| PREDICTED: serine--tRNA ligase, mitochondria... 92 1e-16
ref|XP_010278855.1| PREDICTED: serine--tRNA ligase, mitochondria... 92 1e-16
emb|CBI14794.3| unnamed protein product [Vitis vinifera] 92 1e-16
ref|XP_004237941.1| PREDICTED: serine--tRNA ligase, mitochondria... 86 8e-15
ref|XP_008349973.1| PREDICTED: serine--tRNA ligase, mitochondria... 86 1e-14
ref|XP_009393559.1| PREDICTED: serine--tRNA ligase, mitochondria... 85 2e-14
ref|XP_009348041.1| PREDICTED: serine--tRNA ligase, mitochondria... 84 3e-14
ref|XP_011465722.1| PREDICTED: serine--tRNA ligase, mitochondria... 84 5e-14
ref|XP_009373108.1| PREDICTED: serine--tRNA ligase, mitochondria... 83 7e-14
>ref|XP_002301073.2| seryl-tRNA synthetase family protein [Populus trichocarpa]
gi|550344677|gb|EEE80346.2| seryl-tRNA synthetase family
protein [Populus trichocarpa]
Length = 523
Score = 114 bits (284), Expect = 4e-23
Identities = 63/105 (60%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHH--SPPKRPLPFIVRA 202
MGLQC F GTT QTLKLAAIP+ S I +P ++ P + P +VRA
Sbjct: 1 MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLNPFSRHNYVICPQRNPFKLLVRA 60
Query: 201 LSAPAVQTTPITFH-DDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSA AVQT PIT D+KV KPQWKAAIDFKWIRDNK AVALNIK
Sbjct: 61 LSATAVQTAPITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIK 105
>gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 112 bits (281), Expect = 8e-23
Identities = 62/105 (59%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHH--SPPKRPLPFIVRA 202
MGLQC F GTT QTLKLAAIP+ S I +P ++ P + P +VRA
Sbjct: 1 MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLNPFSRHNYVICPQRNPFKLLVRA 60
Query: 201 LSAPAVQTTPITFH-DDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LS+ AVQT PIT D+KV KPQWKAAIDFKWIRDNK AVALNIK
Sbjct: 61 LSSTAVQTAPITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIK 105
>ref|XP_011016816.1| PREDICTED: serine--tRNA ligase, mitochondrial [Populus euphratica]
Length = 523
Score = 112 bits (279), Expect = 1e-22
Identities = 62/105 (59%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHH--SPPKRPLPFIVRA 202
MGLQC F GTT QTLKLAAIP+ S I +P ++ P + P +VRA
Sbjct: 1 MGLQCHFGGTTIQTLKLAAIPASSRFILKPISKTLVLNPFSRHNYVICPQRNPFKLLVRA 60
Query: 201 LSAPAVQTTPITFH-DDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSA AVQT PIT D+KV KPQWKAAIDFKWIRDNK VALNIK
Sbjct: 61 LSATAVQTAPITESLDNKVVKPQWKAAIDFKWIRDNKDVVALNIK 105
>ref|XP_007018713.1| Seryl-tRNA synthetase isoform 3 [Theobroma cacao]
gi|508724041|gb|EOY15938.1| Seryl-tRNA synthetase
isoform 3 [Theobroma cacao]
Length = 435
Score = 105 bits (261), Expect = 2e-20
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRP-LPFIV 208
M LQC +GTT Q+LK+A IP SSS IFRP HSPP+ P + ++
Sbjct: 1 MALQCRLSGTTIQSLKMATIPILSSSSRFIFRPLPQSLKLSIFS--RHSPPRTPPITLLI 58
Query: 207 RALSAPAVQTTPIT-FHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
RALSAPAV P T D+KV KPQW+AAIDFKWIRDNK AVA+NIK
Sbjct: 59 RALSAPAVAAAPATEISDNKVVKPQWRAAIDFKWIRDNKEAVAINIK 105
>ref|XP_007018712.1| Seryl-tRNA synthetase isoform 2 [Theobroma cacao]
gi|508724040|gb|EOY15937.1| Seryl-tRNA synthetase
isoform 2 [Theobroma cacao]
Length = 444
Score = 105 bits (261), Expect = 2e-20
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRP-LPFIV 208
M LQC +GTT Q+LK+A IP SSS IFRP HSPP+ P + ++
Sbjct: 1 MALQCRLSGTTIQSLKMATIPILSSSSRFIFRPLPQSLKLSIFS--RHSPPRTPPITLLI 58
Query: 207 RALSAPAVQTTPIT-FHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
RALSAPAV P T D+KV KPQW+AAIDFKWIRDNK AVA+NIK
Sbjct: 59 RALSAPAVAAAPATEISDNKVVKPQWRAAIDFKWIRDNKEAVAINIK 105
>ref|XP_007018711.1| Seryl-tRNA synthetase isoform 1 [Theobroma cacao]
gi|508724039|gb|EOY15936.1| Seryl-tRNA synthetase
isoform 1 [Theobroma cacao]
Length = 523
Score = 105 bits (261), Expect = 2e-20
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRP-LPFIV 208
M LQC +GTT Q+LK+A IP SSS IFRP HSPP+ P + ++
Sbjct: 1 MALQCRLSGTTIQSLKMATIPILSSSSRFIFRPLPQSLKLSIFS--RHSPPRTPPITLLI 58
Query: 207 RALSAPAVQTTPIT-FHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
RALSAPAV P T D+KV KPQW+AAIDFKWIRDNK AVA+NIK
Sbjct: 59 RALSAPAVAAAPATEISDNKVVKPQWRAAIDFKWIRDNKEAVAINIK 105
>ref|XP_010278856.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform X2 [Nelumbo
nucifera]
Length = 515
Score = 100 bits (248), Expect = 5e-19
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHHSPPKRPLPFIVRALS 196
MGL C F +T QTLKL AIPS S S+ RP +H + LPF+ RALS
Sbjct: 1 MGLPCGFGASTLQTLKLVAIPS-SFSMLRPCISKTLSLHS---YHHFQRSSLPFLSRALS 56
Query: 195 APAVQTTPITFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
A A+Q+T I D+KV KPQW+AAIDFKWIRDNK +VA NIK
Sbjct: 57 ATALQSTSIANEDEKVVKPQWRAAIDFKWIRDNKDSVAANIK 98
>gb|KHG00495.1| Serine--tRNA ligase [Gossypium arboreum]
Length = 523
Score = 97.1 bits (240), Expect = 5e-18
Identities = 57/106 (53%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRPLPFIVR 205
M LQC +G TFQ+LKLA IP SSS IFR RH +P P ++R
Sbjct: 1 MALQCRLSGATFQSLKLATIPISSSSSRFIFRTLPKTLNLALFS-RHSAPKAPPFSVLIR 59
Query: 204 ALSAPAVQTTPITFHDD-KVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSAPAV P D KV KPQW AAIDFKWIRDNK AVA+NIK
Sbjct: 60 TLSAPAVAAAPAAETSDIKVVKPQWNAAIDFKWIRDNKEAVAVNIK 105
>ref|XP_012445645.1| PREDICTED: serine--tRNA ligase, mitochondrial [Gossypium raimondii]
gi|763791992|gb|KJB58988.1| hypothetical protein
B456_009G234100 [Gossypium raimondii]
Length = 523
Score = 96.3 bits (238), Expect = 8e-18
Identities = 57/106 (53%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRPLPFIVR 205
M LQC +G TFQ+LKLA IP SSS IFR RH +P P ++R
Sbjct: 1 MALQCRLSGATFQSLKLATIPISSSSSRFIFRTLPKTLNLALFS-RHSAPKAPPFSVLIR 59
Query: 204 ALSAPAVQTTPITFHDD-KVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSAPAV P D KV KPQW AAIDFKWIRDNK AVA+NIK
Sbjct: 60 NLSAPAVAAAPAAETSDIKVVKPQWNAAIDFKWIRDNKEAVAVNIK 105
>gb|KJB58987.1| hypothetical protein B456_009G234100 [Gossypium raimondii]
Length = 428
Score = 96.3 bits (238), Expect = 8e-18
Identities = 57/106 (53%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---IFRPXXXXXXXXXXXSRHHSPPKRPLPFIVR 205
M LQC +G TFQ+LKLA IP SSS IFR RH +P P ++R
Sbjct: 1 MALQCRLSGATFQSLKLATIPISSSSSRFIFRTLPKTLNLALFS-RHSAPKAPPFSVLIR 59
Query: 204 ALSAPAVQTTPITFHDD-KVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSAPAV P D KV KPQW AAIDFKWIRDNK AVA+NIK
Sbjct: 60 NLSAPAVAAAPAAETSDIKVVKPQWNAAIDFKWIRDNKEAVAVNIK 105
>ref|XP_010098632.1| Serine--tRNA ligase [Morus notabilis] gi|587886580|gb|EXB75371.1|
Serine--tRNA ligase [Morus notabilis]
Length = 520
Score = 92.4 bits (228), Expect = 1e-16
Identities = 56/114 (49%), Positives = 66/114 (57%), Gaps = 12/114 (10%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSS---------IFRPXXXXXXXXXXXSRHHSPPKRP 223
MGLQCC GT TLKLAAIPS S+S +F P RH+ + P
Sbjct: 1 MGLQCCLGGTALHTLKLAAIPSSSTSSSSSSSCRFVFGPLSRAFTSRFLS-RHNRSQRPP 59
Query: 222 LPFIVRALS---APAVQTTPITFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
+RALS AP +T+P D+KVAKPQWKAAIDFKWI DNK AVA N++
Sbjct: 60 FLLPLRALSVSAAPPTKTSP----DEKVAKPQWKAAIDFKWITDNKDAVAANVR 109
>ref|XP_002269287.2| PREDICTED: serine--tRNA ligase, mitochondrial [Vitis vinifera]
Length = 532
Score = 92.4 bits (228), Expect = 1e-16
Identities = 54/105 (51%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXS-RHHSPPKRPLPFIVRAL 199
MGL C +TFQTLKL IP FRP RH+ + P PF RA
Sbjct: 1 MGLPLCLGSSTFQTLKLTTIPIP----FRPLVSRTLTLNLLLYRHNCSQRPPFPFQARAR 56
Query: 198 --SAPAVQTTPITFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
SAP VQ +P+ +DKV KPQWKAAI+FKWIRDNKA VA NIK
Sbjct: 57 APSAPDVQASPVANSNDKVVKPQWKAAINFKWIRDNKAVVANNIK 101
>ref|XP_010278855.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform X1 [Nelumbo
nucifera]
Length = 521
Score = 92.4 bits (228), Expect = 1e-16
Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHHSPPKRPLPFIVRALS 196
MGL C F +T QTLKL AIPS S S+ RP +H + LPF+ RALS
Sbjct: 1 MGLPCGFGASTLQTLKLVAIPS-SFSMLRPCISKTLSLHS---YHHFQRSSLPFLSRALS 56
Query: 195 APAVQTTPITFHDDK------VAKPQWKAAIDFKWIRDNKAAVALNIK 70
A A+Q+T I D+K + KPQW+AAIDFKWIRDNK +VA NIK
Sbjct: 57 ATALQSTSIANEDEKGISFSPLVKPQWRAAIDFKWIRDNKDSVAANIK 104
>emb|CBI14794.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 92.4 bits (228), Expect = 1e-16
Identities = 54/105 (51%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXS-RHHSPPKRPLPFIVRAL 199
MGL C +TFQTLKL IP FRP RH+ + P PF RA
Sbjct: 1 MGLPLCLGSSTFQTLKLTTIPIP----FRPLVSRTLTLNLLLYRHNCSQRPPFPFQARAR 56
Query: 198 --SAPAVQTTPITFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
SAP VQ +P+ +DKV KPQWKAAI+FKWIRDNKA VA NIK
Sbjct: 57 APSAPDVQASPVANSNDKVVKPQWKAAINFKWIRDNKAVVANNIK 101
>ref|XP_004237941.1| PREDICTED: serine--tRNA ligase, mitochondrial [Solanum
lycopersicum]
Length = 509
Score = 86.3 bits (212), Expect = 8e-15
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = -3
Query: 375 MGLQCCFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHHSPPKRPLPFIVRALS 196
M L CCF GTT +LKLAAIP S ++ P+ P VR+LS
Sbjct: 1 MVLHCCFTGTTLHSLKLAAIPYFSRTLTSRLTPYY------------PRPLFPLAVRSLS 48
Query: 195 APAVQTTPITFHDD-KVAKPQWKAAIDFKWIRDNKAAVALNIK 70
A AV T T D+ +V KPQWKAAIDFKWIRDNK +VA+NIK
Sbjct: 49 AAAVVQTAATSTDEYQVVKPQWKAAIDFKWIRDNKDSVAVNIK 91
>ref|XP_008349973.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Malus
domestica]
Length = 523
Score = 85.5 bits (210), Expect = 1e-14
Identities = 56/107 (52%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Frame = -3
Query: 351 GTTFQTLKLAAIPSHS-----SSIFRPXXXXXXXXXXXSRHHSPPKR---PLPFIVRALS 196
GTT QTLKLA IP S S+F+P H S +R PLPF VR LS
Sbjct: 5 GTTLQTLKLATIPPPSFSSSFRSVFKPFSQTFLC------HRSRRQRFPFPLPFFVRGLS 58
Query: 195 APAVQTTPI-----TFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
APA Q T T D+K K QWKAAIDFKWIRDNK AVA NIK
Sbjct: 59 APAAQATATATPKETSPDEKGVKQQWKAAIDFKWIRDNKDAVAANIK 105
>ref|XP_009393559.1| PREDICTED: serine--tRNA ligase, mitochondrial [Musa acuminata
subsp. malaccensis]
Length = 526
Score = 84.7 bits (208), Expect = 2e-14
Identities = 51/99 (51%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = -3
Query: 360 CFNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHHSPPKRPL-PFIVRALSAPAV 184
CF GTTF L LA S S+F P + HH +R L P IVRA S+ A+
Sbjct: 6 CFGGTTFHGLALAPSICRSPSMFSPLRTLTLTLAATNPHHRLLRRVLFPTIVRAFSSTAL 65
Query: 183 QTTPITFHDDKVA-KPQWKAAIDFKWIRDNKAAVALNIK 70
T PIT + K A K QWKAAIDFKWIRDNK VA NIK
Sbjct: 66 PTAPITKQEGKAAAKQQWKAAIDFKWIRDNKDVVAANIK 104
>ref|XP_009348041.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Pyrus x
bretschneideri]
Length = 523
Score = 84.3 bits (207), Expect = 3e-14
Identities = 55/108 (50%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Frame = -3
Query: 357 FNGTTFQTLKLAAIPSHS-----SSIFRPXXXXXXXXXXXSRHHSPPKRPLP--FIVRAL 199
F GTT QTLKLA IP S S+F+P RH + PLP F VR L
Sbjct: 3 FGGTTLQTLKLAPIPPPSFSSSFRSVFKPFSQTFLC-----RHSRRQRLPLPPPFFVRGL 57
Query: 198 SAPAVQTTPI-----TFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
SAPA Q T T D+K K QWKAAIDFKWIRDNK AVA NI+
Sbjct: 58 SAPAAQATATAAPKETSPDEKDVKQQWKAAIDFKWIRDNKDAVAANIE 105
>ref|XP_011465722.1| PREDICTED: serine--tRNA ligase, mitochondrial [Fragaria vesca
subsp. vesca]
Length = 555
Score = 83.6 bits (205), Expect = 5e-14
Identities = 51/102 (50%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Frame = -3
Query: 357 FNGTTFQTLKLAAIPSHSSSIFRPXXXXXXXXXXXSRHHSPPKRPLP-FIVRALSAPAVQ 181
F GT+ QTLKLAA+PS SSS RH PP+ LP F V++ SA AV
Sbjct: 36 FCGTSLQTLKLAALPSPSSSSSFRSAFKPLSKTFLYRHSHPPRPQLPLFFVKSFSASAVH 95
Query: 180 TTP-----ITFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
T +T +K KPQWKAAIDFKWIR+NK VA NIK
Sbjct: 96 ATAPTAPKVTSPVEKGVKPQWKAAIDFKWIRENKDDVAANIK 137
>ref|XP_009373108.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Pyrus x
bretschneideri]
Length = 523
Score = 83.2 bits (204), Expect = 7e-14
Identities = 55/109 (50%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Frame = -3
Query: 357 FNGTTFQTLKLAAIPSHS-----SSIFRPXXXXXXXXXXXSRHHSPPKR---PLPFIVRA 202
F GTT QTLKLA IP S S+F+P HS +R P PF VR
Sbjct: 3 FGGTTLQTLKLAPIPPPSFSSSFRSVFKPFSQTFLC------RHSRRQRLPVPPPFFVRG 56
Query: 201 LSAPAVQTTPI-----TFHDDKVAKPQWKAAIDFKWIRDNKAAVALNIK 70
LSAPA Q T T D+K K QWKAAIDFKWIRDNK AVA NI+
Sbjct: 57 LSAPAAQATATAAPKETSPDEKDVKQQWKAAIDFKWIRDNKDAVAANIE 105