BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00023725
         (447 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28206.1| unknown [Arabidopsis thaliana]                          57   4e-06
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik...    57   4e-06

>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
 Frame = -3

Query: 415 WCIWKAWNDFVFNLRTWEVSRIVGIAVERALEHHEPKLHEGAVTRPS-PKAIRAGWIAPP 239
           W +WK+ N+ +F  + ++   ++  A+E   E    +  EG  + P   + +   W APP
Sbjct: 82  WRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAPP 141

Query: 238 SGCLKCSVDAIFR---PRDGGAXXXLNSSG*ILRAATCKLDFISDTSTAEAATLRWAMLL 68
              +KC+ DA ++   PR G      N SG +L      L    +   AE   LRWA+L 
Sbjct: 142 YQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAVLT 201

Query: 67  LK*WTSLPIVF*SNANSL 14
           +  +    I+F S+A +L
Sbjct: 202 MSRFNYKRIIFESDAQAL 219


>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
           protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
           hypothetical protein At2g34320 [Arabidopsis thaliana]
           gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
           ribonuclease H-like superfamily protein [Arabidopsis
           thaliana]
          Length = 292

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
 Frame = -3

Query: 415 WCIWKAWNDFVFNLRTWEVSRIVGIAVERALEHHEPKLHEGAVTRPS-PKAIRAGWIAPP 239
           W +WK+ N+ +F  + ++   ++  A+E   E    +  EG  + P   + +   W APP
Sbjct: 82  WRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAPP 141

Query: 238 SGCLKCSVDAIFR---PRDGGAXXXLNSSG*ILRAATCKLDFISDTSTAEAATLRWAMLL 68
              +KC+ DA ++   PR G      N SG +L      L    +   AE   LRWA+L 
Sbjct: 142 YQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAVLT 201

Query: 67  LK*WTSLPIVF*SNANSL 14
           +  +    I+F S+A +L
Sbjct: 202 MSRFNYKRIIFESDAQAL 219