BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00023597
         (929 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   125   6e-26
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              125   6e-26
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   125   6e-26
ref|XP_008341731.1| PREDICTED: DNA repair protein UVH3 [Malus do...   113   2e-22
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...   112   4e-22
ref|XP_007214903.1| hypothetical protein PRUPE_ppa000176mg [Prun...   109   3e-21
ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X...   107   2e-20
emb|CDP02141.1| unnamed protein product [Coffea canephora]             87   1e-14
gb|KDO66256.1| hypothetical protein CISIN_1g0004561mg, partial [...    86   3e-14
ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citr...    86   3e-14
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...    84   1e-13
ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isof...    84   2e-13
ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isof...    84   2e-13
ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isof...    84   2e-13
gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium r...    83   3e-13
gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]      81   1e-12
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...    79   4e-12
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...    79   4e-12
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...    79   4e-12
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...    79   4e-12

>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  125 bits (313), Expect = 6e-26
 Identities = 86/201 (42%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
 Frame = -1

Query: 872  DQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDG 693
            DQ++ GDAAA  SGKNQ +  DSS  E LC +Y E    +CMDE     E GQL+S +D 
Sbjct: 1164 DQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDE----NEIGQLDS-RDD 1218

Query: 692  DPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGA-SIAAGTSVIENPNPSHQSGFVEEVD 516
            DP+F +E S +YLKMGGGFC++EDE +KD +      A   ++ ENP+P        E +
Sbjct: 1219 DPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDP--------ESE 1270

Query: 515  HDIGSVQLVSSPINALDGFQNEGKTNA-SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDS 339
              I   + VSS  N   GFQ+E      +E NL   NA+       +  S  E T  DD+
Sbjct: 1271 LAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPNAT-------IGLSMPENT-GDDT 1322

Query: 338  GMTPVRFLSAMPSLRRKRRKS 276
            G   V+ L AMP LR+KRR S
Sbjct: 1323 GTNTVKALRAMPFLRKKRRLS 1343


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  125 bits (313), Expect = 6e-26
 Identities = 86/201 (42%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
 Frame = -1

Query: 872  DQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDG 693
            DQ++ GDAAA  SGKNQ +  DSS  E LC +Y E    +CMDE     E GQL+S +D 
Sbjct: 1270 DQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDE----NEIGQLDS-RDD 1324

Query: 692  DPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGA-SIAAGTSVIENPNPSHQSGFVEEVD 516
            DP+F +E S +YLKMGGGFC++EDE +KD +      A   ++ ENP+P        E +
Sbjct: 1325 DPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDP--------ESE 1376

Query: 515  HDIGSVQLVSSPINALDGFQNEGKTNA-SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDS 339
              I   + VSS  N   GFQ+E      +E NL   NA+       +  S  E T  DD+
Sbjct: 1377 LAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPNAT-------IGLSMPENT-GDDT 1428

Query: 338  GMTPVRFLSAMPSLRRKRRKS 276
            G   V+ L AMP LR+KRR S
Sbjct: 1429 GTNTVKALRAMPFLRKKRRLS 1449


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  125 bits (313), Expect = 6e-26
 Identities = 86/201 (42%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
 Frame = -1

Query: 872  DQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDG 693
            DQ++ GDAAA  SGKNQ +  DSS  E LC +Y E    +CMDE     E GQL+S +D 
Sbjct: 1334 DQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDE----NEIGQLDS-RDD 1388

Query: 692  DPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGA-SIAAGTSVIENPNPSHQSGFVEEVD 516
            DP+F +E S +YLKMGGGFC++EDE +KD +      A   ++ ENP+P        E +
Sbjct: 1389 DPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDP--------ESE 1440

Query: 515  HDIGSVQLVSSPINALDGFQNEGKTNA-SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDS 339
              I   + VSS  N   GFQ+E      +E NL   NA+       +  S  E T  DD+
Sbjct: 1441 LAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPNAT-------IGLSMPENT-GDDT 1492

Query: 338  GMTPVRFLSAMPSLRRKRRKS 276
            G   V+ L AMP LR+KRR S
Sbjct: 1493 GTNTVKALRAMPFLRKKRRLS 1513


>ref|XP_008341731.1| PREDICTED: DNA repair protein UVH3 [Malus domestica]
          Length = 1593

 Score =  113 bits (283), Expect = 2e-22
 Identities = 79/197 (40%), Positives = 109/197 (55%), Gaps = 4/197 (2%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPSFGE 675
            ++A+S S K Q   G+ S   GL ++Y+E G G C      E ETG+    Q GDPSFG 
Sbjct: 1405 ESASSLSEKKQQNEGNLSPNVGLHKDYLETGGGFC----PVEDETGEPGLSQHGDPSFGA 1460

Query: 674  ELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDHDIGSVQ 495
            E+S +YLK GGGFC DE E   D+D G  +   T+  EN +    SG V  V  D+G + 
Sbjct: 1461 EVSEDYLKTGGGFCGDESETGNDQD-GIRVQTKTTASENSDLPSFSGIVNMV--DLGHIS 1517

Query: 494  LVSSPIN--ALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSGMTP 327
              SS  N   L GFQ+  +T+A  +E+N+ +  A+  + + KV+ S  E    D+S    
Sbjct: 1518 SQSSIGNKRPLVGFQSSERTDAYDTEQNINHETATITDDQTKVNASLPE-NSVDNSRQPS 1576

Query: 326  VRFLSAMPSLRRKRRKS 276
               LSAMP LR+KRRK+
Sbjct: 1577 GGALSAMPFLRKKRRKT 1593


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  112 bits (280), Expect = 4e-22
 Identities = 74/198 (37%), Positives = 105/198 (53%)
 Frame = -1

Query: 872  DQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDG 693
            ++ +  +AA   + +N  E  D + +E   R+Y+E G G CMDE E     G  +  Q  
Sbjct: 1485 EEAMEQEAADDLNEENPSEARDPTFEEDFSRDYLERGGGFCMDEKE----VGHPDESQGV 1540

Query: 692  DPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDH 513
            DP+   E S +YLKMGGGFC+DE+E  KD D     A     +   + S+   F ++ D 
Sbjct: 1541 DPTPEAEASKDYLKMGGGFCIDENETSKDPD----AACDQDPVAATDSSNGVAFTDKADD 1596

Query: 512  DIGSVQLVSSPINALDGFQNEGKTNASEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSGM 333
            +  S +  SSP  +LDG QN   T   E NLG+ NA+ ++   K     QE T  +D+  
Sbjct: 1597 NAASAEPSSSPKRSLDGLQNASFT---ELNLGHQNAANEDDS-KGSAPPQE-TTVNDTVT 1651

Query: 332  TPVRFLSAMPSLRRKRRK 279
              V  LSAMP+L+RKRRK
Sbjct: 1652 AFVGGLSAMPTLKRKRRK 1669


>ref|XP_007214903.1| hypothetical protein PRUPE_ppa000176mg [Prunus persica]
            gi|462411053|gb|EMJ16102.1| hypothetical protein
            PRUPE_ppa000176mg [Prunus persica]
          Length = 1521

 Score =  109 bits (273), Expect = 3e-21
 Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
 Frame = -1

Query: 881  LFWDQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESG 702
            L WD+    +  +  S K Q   G+ S   GLC +Y+E G G C      E ETG+L   
Sbjct: 1324 LSWDKGKCEEGPSRFSEKKQQNAGNLSPNAGLCNDYLETGGGFC----PVEDETGELGLS 1379

Query: 701  QDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRD-MGASIAAGTSVIENPNPSHQSGFVE 525
            Q  DPSF  E S +YLKMGG  C D  ++  DRD +G    A  S  E+ N  + SGFV 
Sbjct: 1380 QHHDPSFEAEASEDYLKMGGRLCRD-GQIGNDRDEIGVQATAAAS--EDSNLPNFSGFVN 1436

Query: 524  EVDHDIGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTK 351
            +VD    SVQ        L GF+   +T A  +E+++ +  AS  +   K+  S QE T 
Sbjct: 1437 KVDFGNASVQSSVGTKRPLQGFEGCERTGAYDAEQSINDEIASKNDDHSKLSVSLQENT- 1495

Query: 350  EDDSGMTPVRF-LSAMPSLRRKRRKS 276
             D+SG   V   LSAMP LR+KRR++
Sbjct: 1496 VDNSGQPSVGVGLSAMPFLRKKRRQT 1521


>ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Prunus mume]
          Length = 1681

 Score =  107 bits (266), Expect = 2e-20
 Identities = 82/218 (37%), Positives = 110/218 (50%), Gaps = 16/218 (7%)
 Frame = -1

Query: 881  LFWDQVLVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEP---------- 732
            L WD+    +  +  S K Q   G+ S   GLC +Y+E G G C+ E E           
Sbjct: 1468 LSWDEGKCEEGPSRFSEKKQQNAGNLSPNAGLCNDYLETGGGFCLVEDETGELAGGGFCP 1527

Query: 731  -ETETGQLESGQDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRD-MGASIAAGTSVIEN 558
             E ETG+L   Q  DPSF  E+S +Y KMGG  C D  +V  DRD +G    A  S  E+
Sbjct: 1528 VEDETGELGLSQHHDPSFEAEVSEDYHKMGGRLCRD-GQVGNDRDEIGVQATAAAS--ED 1584

Query: 557  PNPSHQSGFVEEVDHDIGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRL 384
             +  + SGFV +VD    SVQ        L GF+   +T A  +E+ + +  AS  +   
Sbjct: 1585 SDLPNFSGFVNKVDFGNASVQSSVGTKRPLQGFEGCERTGAYDTEQIINDEIASKNDDHS 1644

Query: 383  KVDTSSQEFTKEDDSGMTP--VRFLSAMPSLRRKRRKS 276
            K+  S QE T  D+SG T   V  LSAMP LR+KRR++
Sbjct: 1645 KLSVSLQENT-VDNSGKTSAGVGALSAMPFLRKKRRQT 1681


>emb|CDP02141.1| unnamed protein product [Coffea canephora]
          Length = 1523

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
 Frame = -1

Query: 848  AASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPSFGEEL 669
            AA  S  N+ E    +L + L  E++E GDG  + +A+ +    QL S    D     EL
Sbjct: 1344 AAVPSKINESE----NLDQELSWEFLEKGDGYGVGKAKEDMGADQLNSSPSNDIVSDTEL 1399

Query: 668  SNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDHDIGSVQLV 489
            S EYL +GGGFCLDED  + D   G+S   G       +PS  SG        +G  ++ 
Sbjct: 1400 SKEYLSVGGGFCLDEDTTDGDL-QGSSKCPGKVTAFESDPSKCSG--------LGEDEIS 1450

Query: 488  SSPINALDGFQNE--GKTNASEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSGMTPVRFL 315
             SP  A++  Q E  G  + S      +   + N+      S QE   +DD      R+ 
Sbjct: 1451 KSPTRAVNPVQAERLGNLDTSYTTATKNPDESANRDRSEVASFQEIISDDDYDKDSSRYF 1510

Query: 314  SAMPSLRRKRRKS 276
             AMP+LRRKRRK+
Sbjct: 1511 RAMPNLRRKRRKT 1523


>gb|KDO66256.1| hypothetical protein CISIN_1g0004561mg, partial [Citrus sinensis]
           gi|641847377|gb|KDO66257.1| hypothetical protein
           CISIN_1g0004561mg, partial [Citrus sinensis]
          Length = 394

 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -1

Query: 863 LVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPS 684
           + G+A+A  S K QH   D S+     ++YIE G G C+D+ E     GQ       DP 
Sbjct: 220 VTGEASADYSRKKQHRADDPSID----KDYIERGGGFCIDDQE----IGQPSVSPCDDPF 271

Query: 683 FGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVI--ENPNPSHQSGFVEEVDHD 510
              E++ +Y+KMGGGFC DE E  +D+     +AA   V+  E+P+    S      D  
Sbjct: 272 LEAEITKDYMKMGGGFCHDESETREDQ-----VAAKDPVVTGESPSTCFDSSDGVHCDVG 326

Query: 509 IGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSG 336
           +G     S+   A +G +N G+T+   +E N    NA++ +            +  +D+G
Sbjct: 327 LGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTD------------SARNDAG 374

Query: 335 MTPVRFLSAMPSLRRKRRKS 276
                 L+AM  LRRKRR+S
Sbjct: 375 RASRGSLTAMTFLRRKRRRS 394


>ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citrus clementina]
            gi|557549063|gb|ESR59692.1| hypothetical protein
            CICLE_v10014025mg [Citrus clementina]
          Length = 1699

 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -1

Query: 863  LVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPS 684
            + G+A+A  S K QH   D S+     ++YIE G G C+D+ E     GQ       DP 
Sbjct: 1525 VTGEASADYSRKKQHRADDPSID----KDYIERGGGFCIDDQE----IGQPSVSPCDDPF 1576

Query: 683  FGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVI--ENPNPSHQSGFVEEVDHD 510
               E++ +Y+KMGGGFC DE E  +D+     +AA   V+  E+P+    S      D  
Sbjct: 1577 LEAEITKDYMKMGGGFCHDESETREDQ-----VAAKDPVVTGESPSTCFDSSDGVHCDVG 1631

Query: 509  IGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSG 336
            +G     S+   A +G +N G+T+   +E N    NA++ +            +  +D+G
Sbjct: 1632 LGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTD------------SARNDAG 1679

Query: 335  MTPVRFLSAMPSLRRKRRKS 276
                  L+AM  LRRKRR+S
Sbjct: 1680 RASRGSLTAMTFLRRKRRRS 1699


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPSFGE 675
            DA++  +GK QH+V D+ L E   ++Y+E G     D+           +G +     G 
Sbjct: 1465 DASSCLNGKEQHKVEDA-LPEDFSKDYLENGQHCLTDD-----------NGSEPKYPGGA 1512

Query: 674  ELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDHDIGSVQ 495
             +S +YLKMGGGFC+DE E   D+D  A   +  +  E  + S+ SG +EE D   G + 
Sbjct: 1513 SVSKDYLKMGGGFCMDESETCTDQD-AAHSPSMPAFEEMADASNVSGSMEETDRGEGLLP 1571

Query: 494  LVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSGMTPVR 321
            LV S    L+  Q+ GKTNA  +E +    NA+      +      E T       T   
Sbjct: 1572 LVCSIKRTLNDMQDGGKTNAHDAEPSTDCLNATDIGDHSEASLCLPETT----GSKTIAP 1627

Query: 320  FLSAMPSLRRKRR 282
             LSAMP L+RKRR
Sbjct: 1628 TLSAMPFLKRKRR 1640


>ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isoform X3 [Citrus sinensis]
          Length = 1485

 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -1

Query: 863  LVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPS 684
            + G+A+A  S K QH   D S+     ++YIE G G C+D+ E     G+       DP 
Sbjct: 1311 VTGEASADYSRKKQHRADDPSID----KDYIERGGGFCIDDRE----IGRPSVSPCDDPF 1362

Query: 683  FGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVI--ENPNPSHQSGFVEEVDHD 510
               E++ +Y+KMGGGFC DE E  +D+     +AA   V+  E+P+    S      D  
Sbjct: 1363 LEAEITKDYMKMGGGFCHDESETREDQ-----VAAKDPVVTGESPSTCLDSSDGVHCDVG 1417

Query: 509  IGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSG 336
            +G     S+   A +G +N G+T+   +E N    NA++ +            +  +D+G
Sbjct: 1418 LGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTD------------SARNDAG 1465

Query: 335  MTPVRFLSAMPSLRRKRRKS 276
                  L+AM  LRRKRR+S
Sbjct: 1466 RASRGSLTAMTFLRRKRRRS 1485


>ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Citrus sinensis]
          Length = 1531

 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -1

Query: 863  LVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPS 684
            + G+A+A  S K QH   D S+     ++YIE G G C+D+ E     G+       DP 
Sbjct: 1357 VTGEASADYSRKKQHRADDPSID----KDYIERGGGFCIDDRE----IGRPSVSPCDDPF 1408

Query: 683  FGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVI--ENPNPSHQSGFVEEVDHD 510
               E++ +Y+KMGGGFC DE E  +D+     +AA   V+  E+P+    S      D  
Sbjct: 1409 LEAEITKDYMKMGGGFCHDESETREDQ-----VAAKDPVVTGESPSTCLDSSDGVHCDVG 1463

Query: 509  IGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSG 336
            +G     S+   A +G +N G+T+   +E N    NA++ +            +  +D+G
Sbjct: 1464 LGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTD------------SARNDAG 1511

Query: 335  MTPVRFLSAMPSLRRKRRKS 276
                  L+AM  LRRKRR+S
Sbjct: 1512 RASRGSLTAMTFLRRKRRRS 1531


>ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Citrus sinensis]
          Length = 1699

 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -1

Query: 863  LVGDAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPS 684
            + G+A+A  S K QH   D S+     ++YIE G G C+D+ E     G+       DP 
Sbjct: 1525 VTGEASADYSRKKQHRADDPSID----KDYIERGGGFCIDDRE----IGRPSVSPCDDPF 1576

Query: 683  FGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVI--ENPNPSHQSGFVEEVDHD 510
               E++ +Y+KMGGGFC DE E  +D+     +AA   V+  E+P+    S      D  
Sbjct: 1577 LEAEITKDYMKMGGGFCHDESETREDQ-----VAAKDPVVTGESPSTCLDSSDGVHCDVG 1631

Query: 509  IGSVQLVSSPINALDGFQNEGKTNA--SEKNLGNSNASTKNKRLKVDTSSQEFTKEDDSG 336
            +G     S+   A +G +N G+T+   +E N    NA++ +            +  +D+G
Sbjct: 1632 LGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTD------------SARNDAG 1679

Query: 335  MTPVRFLSAMPSLRRKRRKS 276
                  L+AM  LRRKRR+S
Sbjct: 1680 RASRGSLTAMTFLRRKRRRS 1699


>gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1635

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPSFGE 675
            +A      K Q E  + SL + +  +Y+E G G CMDE   +      ++ QD D     
Sbjct: 1454 EAGEDVKEKIQCEAREPSL-DNIYGDYLETGGGFCMDERGTDLP----DANQDVD--LET 1506

Query: 674  ELSNEYLKMGGGFCLDEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDHDIGSVQ 495
            E +N+YLKMGGGFC++E E   + D G         ++    S+   F+++ D +I S +
Sbjct: 1507 EPTNDYLKMGGGFCMEESETIGNPDAGNY----EDPVQATESSNCFAFMDKADDNIDSAE 1562

Query: 494  -LVSSPINALDGFQNEGKTNASEK---NLGNSNASTKNKRLKVDTSSQEFTKEDDSGMTP 327
              V++  + LD  QN GKT        NL + NA+ K+        S    +  D G T 
Sbjct: 1563 PSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDD----SKESASLPEASDVGTTF 1618

Query: 326  VRFLSAMPSLRRKRRK 279
            +  LSAMPSL+RKRR+
Sbjct: 1619 ISGLSAMPSLKRKRRR 1634


>gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]
          Length = 1697

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
 Frame = -1

Query: 809  DSSLKEGLCREYIEMGDGVCMDEAEPETETGQLESGQDGDPSFGEELSNEYLKMGGGFCL 630
            D  L+     +Y++MG G CM     E +  Q ++ QD +P      +N+YLKMGGGFC+
Sbjct: 1529 DFDLETEPTNDYLKMGGGFCM-----EGDIDQSDTSQDINPFSETGSANDYLKMGGGFCM 1583

Query: 629  DEDEVEKDRDMGASIAAGTSVIENPNPSHQSGFVEEVDHDIGSVQ-LVSSPINALDGFQN 453
            +E E   + D G         ++    S+   F ++ D +I S +  V++  + LD  QN
Sbjct: 1584 EESETIDNPDAGNY----QDPVQATESSNCFAFTDKADDNIDSAEPSVNAEGSLLDKLQN 1639

Query: 452  EGKTNASEK---NLGNSNASTKNKRLKVDTSSQEFTKEDDSGMTPVRFLSAMPSLRRKRR 282
             GKT        NL + NA+ K+        S    +  D   T +  LSAMPSL+RKRR
Sbjct: 1640 GGKTPNEANDALNLSHQNAANKDD----SKESASLRETSDVRTTFISVLSAMPSLKRKRR 1695

Query: 281  K 279
            +
Sbjct: 1696 R 1696


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDE---------------AEP---- 732
            +A      K Q E  + SL + +  +Y+E G G CMDE                EP    
Sbjct: 1186 EAGEDVKEKIQCEAREPSL-DNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDY 1244

Query: 731  ---------ETETGQLESGQDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAA 579
                     E +  Q ++ QD +P      +N+YLKMGGGFC++E E   + D G     
Sbjct: 1245 LKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNY--- 1301

Query: 578  GTSVIENPNPSHQSGFVEEVDHDIGSVQ-LVSSPINALDGFQNEGKTNASEK---NLGNS 411
                ++    S+   F+++ D +I S +  V++  + LD  QN GKT        NL + 
Sbjct: 1302 -EDPVQATESSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHR 1360

Query: 410  NASTKNKRLKVDTSSQEFTKEDDSGMTPVRFLSAMPSLRRKRRK 279
            NA+ K+        S    +  D G T +  LSAMPSL+RKRR+
Sbjct: 1361 NAANKDD----SKESASLPEASDVGTTFISGLSAMPSLKRKRRR 1400


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDE---------------AEP---- 732
            +A      K Q E  + SL + +  +Y+E G G CMDE                EP    
Sbjct: 1225 EAGEDVKEKIQCEAREPSL-DNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDY 1283

Query: 731  ---------ETETGQLESGQDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAA 579
                     E +  Q ++ QD +P      +N+YLKMGGGFC++E E   + D G     
Sbjct: 1284 LKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNY--- 1340

Query: 578  GTSVIENPNPSHQSGFVEEVDHDIGSVQ-LVSSPINALDGFQNEGKTNASEK---NLGNS 411
                ++    S+   F+++ D +I S +  V++  + LD  QN GKT        NL + 
Sbjct: 1341 -EDPVQATESSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHR 1399

Query: 410  NASTKNKRLKVDTSSQEFTKEDDSGMTPVRFLSAMPSLRRKRRK 279
            NA+ K+        S    +  D G T +  LSAMPSL+RKRR+
Sbjct: 1400 NAANKDD----SKESASLPEASDVGTTFISGLSAMPSLKRKRRR 1439


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDE---------------AEP---- 732
            +A      K Q E  + SL + +  +Y+E G G CMDE                EP    
Sbjct: 1376 EAGEDVKEKIQCEAREPSL-DNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDY 1434

Query: 731  ---------ETETGQLESGQDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAA 579
                     E +  Q ++ QD +P      +N+YLKMGGGFC++E E   + D G     
Sbjct: 1435 LKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNY--- 1491

Query: 578  GTSVIENPNPSHQSGFVEEVDHDIGSVQ-LVSSPINALDGFQNEGKTNASEK---NLGNS 411
                ++    S+   F+++ D +I S +  V++  + LD  QN GKT        NL + 
Sbjct: 1492 -EDPVQATESSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHR 1550

Query: 410  NASTKNKRLKVDTSSQEFTKEDDSGMTPVRFLSAMPSLRRKRRK 279
            NA+ K+        S    +  D G T +  LSAMPSL+RKRR+
Sbjct: 1551 NAANKDD----SKESASLPEASDVGTTFISGLSAMPSLKRKRRR 1590


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
 Frame = -1

Query: 854  DAAASSSGKNQHEVGDSSLKEGLCREYIEMGDGVCMDE---------------AEP---- 732
            +A      K Q E  + SL + +  +Y+E G G CMDE                EP    
Sbjct: 1491 EAGEDVKEKIQCEAREPSL-DNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDY 1549

Query: 731  ---------ETETGQLESGQDGDPSFGEELSNEYLKMGGGFCLDEDEVEKDRDMGASIAA 579
                     E +  Q ++ QD +P      +N+YLKMGGGFC++E E   + D G     
Sbjct: 1550 LKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNY--- 1606

Query: 578  GTSVIENPNPSHQSGFVEEVDHDIGSVQ-LVSSPINALDGFQNEGKTNASEK---NLGNS 411
                ++    S+   F+++ D +I S +  V++  + LD  QN GKT        NL + 
Sbjct: 1607 -EDPVQATESSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHR 1665

Query: 410  NASTKNKRLKVDTSSQEFTKEDDSGMTPVRFLSAMPSLRRKRRK 279
            NA+ K+        S    +  D G T +  LSAMPSL+RKRR+
Sbjct: 1666 NAANKDD----SKESASLPEASDVGTTFISGLSAMPSLKRKRRR 1705